| Definition | Wolbachia sp. wRi, complete genome. |
|---|---|
| Accession | NC_012416 |
| Length | 1,445,873 |
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The map label for this gene is 225630531
Identifier: 225630531
GI number: 225630531
Start: 844790
End: 845584
Strand: Reverse
Name: 225630531
Synonym: WRi_007840
Alternate gene names: NA
Gene position: 845584-844790 (Counterclockwise)
Preceding gene: 225630532
Following gene: 225630530
Centisome position: 58.48
GC content: 29.43
Gene sequence:
>795_bases TTGACTGATAATAAATTAACTGTATGGCAATCAATAGAAGTTTTGACGAAAGCCATATTGAACATGCAGAAAAAATTAAG CTTAATTAAGAATATAGCTTCAGATCAAGACATAACCCTAGAAAAAGGAAAGGAGTTGTTAAGTGGCATTTATGAAGCAA ATTTTAAGCTAAACAAGACAATCAATATAGCTACTTTGCCAAAAATTGGCTATCATATGCTAAATGGTGAGCTTGTTGTA CGTAATCATATTACGGAAGAGGAAGTAAAGATTCCTGGAGATTTTCATTACCTTAAAGTCGTTAAATCCGATCATGATAA TTATAAATTAACGTTTTGTAATTTTTTAGGTAATGAGTTTTTTGAATATAAAAAGTATGATCCACAATATTCTGGTATTT CAGATGAATATAAATTTGTGGATTTTGGTAGTGTAAAAAAGACTCATAATCTAAAATTTAAGGAATACATTGGTCATGCA CCTAAATTTTTTGCTGCAGAAGGGCCTATTGAGCCTGGATCCCAAAACCATGTAATTGATCTATTTGAGCTAGTCAAAAG TGGTAAAGGTAGCAAAGTGGGAACCTTTGCTGATGAATTTGGTTATTTTGATGATCAAAATAAATTACATTATTATAATT ATCACAAAAGTGTAGAAAGTAATACTTATGATCCTGAAAATTTCAGTGTAAAAATGATAAATATAGATGTGAGCAAAATC GATAAATTCTACCTTATTGCGGAACAAGGTGATATAATCATTCATCCTATTTTGGAAAATTTAGACATATTTTAA
Upstream 100 bases:
>100_bases GCTAATGTAGTTAATATCATGACATAAGTTTACAAAGTATAATACTTTTAACATAAATTCATGATAAAATTCTGTTAATT TAATACTCGAAGTATATAAT
Downstream 100 bases:
>100_bases AGTTTTTTAGAGTATCTAATCTTGTTGTTATTATAATTGGATTTGGTAGCATTGTGTTATGGAAGATAAATTGCTTGAAT CAGTAAAAAACAAAAGTTAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 264; Mature: 263
Protein sequence:
>264_residues MTDNKLTVWQSIEVLTKAILNMQKKLSLIKNIASDQDITLEKGKELLSGIYEANFKLNKTINIATLPKIGYHMLNGELVV RNHITEEEVKIPGDFHYLKVVKSDHDNYKLTFCNFLGNEFFEYKKYDPQYSGISDEYKFVDFGSVKKTHNLKFKEYIGHA PKFFAAEGPIEPGSQNHVIDLFELVKSGKGSKVGTFADEFGYFDDQNKLHYYNYHKSVESNTYDPENFSVKMINIDVSKI DKFYLIAEQGDIIIHPILENLDIF
Sequences:
>Translated_264_residues MTDNKLTVWQSIEVLTKAILNMQKKLSLIKNIASDQDITLEKGKELLSGIYEANFKLNKTINIATLPKIGYHMLNGELVV RNHITEEEVKIPGDFHYLKVVKSDHDNYKLTFCNFLGNEFFEYKKYDPQYSGISDEYKFVDFGSVKKTHNLKFKEYIGHA PKFFAAEGPIEPGSQNHVIDLFELVKSGKGSKVGTFADEFGYFDDQNKLHYYNYHKSVESNTYDPENFSVKMINIDVSKI DKFYLIAEQGDIIIHPILENLDIF >Mature_263_residues TDNKLTVWQSIEVLTKAILNMQKKLSLIKNIASDQDITLEKGKELLSGIYEANFKLNKTINIATLPKIGYHMLNGELVVR NHITEEEVKIPGDFHYLKVVKSDHDNYKLTFCNFLGNEFFEYKKYDPQYSGISDEYKFVDFGSVKKTHNLKFKEYIGHAP KFFAAEGPIEPGSQNHVIDLFELVKSGKGSKVGTFADEFGYFDDQNKLHYYNYHKSVESNTYDPENFSVKMINIDVSKID KFYLIAEQGDIIIHPILENLDIF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30461; Mature: 30330
Theoretical pI: Translated: 6.18; Mature: 6.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDNKLTVWQSIEVLTKAILNMQKKLSLIKNIASDQDITLEKGKELLSGIYEANFKLNKT CCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHCCEEECCE INIATLPKIGYHMLNGELVVRNHITEEEVKIPGDFHYLKVVKSDHDNYKLTFCNFLGNEF EEEEECCCCCEEEECCEEEEEECCCHHHEECCCCEEEEEEEECCCCCEEEEEHHHHCHHH FEYKKYDPQYSGISDEYKFVDFGSVKKTHNLKFKEYIGHAPKFFAAEGPIEPGSQNHVID HHHHCCCCCCCCCCCCEEEEECCCCCCCCCCCHHHHHCCCCCEEECCCCCCCCCCCCHHH LFELVKSGKGSKVGTFADEFGYFDDQNKLHYYNYHKSVESNTYDPENFSVKMINIDVSKI HHHHHHCCCCCCCCCHHHHHCCCCCCCCEEEEEECCCCCCCCCCCCCEEEEEEEEEHHHC DKFYLIAEQGDIIIHPILENLDIF CEEEEEECCCCEEEEEHHHCCCCC >Mature Secondary Structure TDNKLTVWQSIEVLTKAILNMQKKLSLIKNIASDQDITLEKGKELLSGIYEANFKLNKT CCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHCCEEECCE INIATLPKIGYHMLNGELVVRNHITEEEVKIPGDFHYLKVVKSDHDNYKLTFCNFLGNEF EEEEECCCCCEEEECCEEEEEECCCHHHEECCCCEEEEEEEECCCCCEEEEEHHHHCHHH FEYKKYDPQYSGISDEYKFVDFGSVKKTHNLKFKEYIGHAPKFFAAEGPIEPGSQNHVID HHHHCCCCCCCCCCCCEEEEECCCCCCCCCCCHHHHHCCCCCEEECCCCCCCCCCCCHHH LFELVKSGKGSKVGTFADEFGYFDDQNKLHYYNYHKSVESNTYDPENFSVKMINIDVSKI HHHHHHCCCCCCCCCHHHHHCCCCCCCCEEEEEECCCCCCCCCCCCCEEEEEEEEEHHHC DKFYLIAEQGDIIIHPILENLDIF CEEEEEECCCCEEEEEHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA