| Definition | Wolbachia sp. wRi, complete genome. |
|---|---|
| Accession | NC_012416 |
| Length | 1,445,873 |
Click here to switch to the map view.
The map label for this gene is 225630524
Identifier: 225630524
GI number: 225630524
Start: 836319
End: 836750
Strand: Reverse
Name: 225630524
Synonym: WRi_007760
Alternate gene names: NA
Gene position: 836750-836319 (Counterclockwise)
Preceding gene: 225630530
Following gene: 225630523
Centisome position: 57.87
GC content: 30.56
Gene sequence:
>432_bases TTGGCAAGTCTAGAATTTATAGAATCCCATAAATCATCTTCAAAAGATTTTATGAGAAAGAGGAAGTTATCTTTTATTGA CATATTTATCTTAATTTTAAGAAAAAGTGTAAAGTCGCTGCAAGTAATACTAAACGAATTTATTTTATATAGGAAAAAAG ACTATACCGTTACTGCTAGTGCTTTTAGTCAAGCAAGAAAAAAAATGAAACACAGTGCATTTTCAGAAATTAACGAAGGT GTGGTTTCCTTGTACTACCAAGACCAAAAATTTAAAACTTGTTTTGGCTTTAGAGTGTTAGCTCTTGATGCCTCCAAAAT CATTTTACCAACAAGCGTTGAAATAAAAAATGAATTTGGCTCAAGAAAAATACGTAACCAAAAACCAAAAGATTTAGGTG ATTATGCAAGTGCAACCTTTGCGGTTTGTTAA
Upstream 100 bases:
>100_bases TTAAGGAAAAAAGATAGATTTTATGGGATAATGATGTATACCAATAAGTTTAAAGGTAGTATGAGTAAAAAAGGCAGTAA TAAAATTTATTCAAAATGAA
Downstream 100 bases:
>100_bases GATGTGCTAAATAATGTTGCCATAAGGTCAGTGTTAGATAGAGGTAACACTCATGAAATTAACTTAGCAGATGAAATGCT TAAAGTTGTAAATACTAATG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 143; Mature: 142
Protein sequence:
>143_residues MASLEFIESHKSSSKDFMRKRKLSFIDIFILILRKSVKSLQVILNEFILYRKKDYTVTASAFSQARKKMKHSAFSEINEG VVSLYYQDQKFKTCFGFRVLALDASKIILPTSVEIKNEFGSRKIRNQKPKDLGDYASATFAVC
Sequences:
>Translated_143_residues MASLEFIESHKSSSKDFMRKRKLSFIDIFILILRKSVKSLQVILNEFILYRKKDYTVTASAFSQARKKMKHSAFSEINEG VVSLYYQDQKFKTCFGFRVLALDASKIILPTSVEIKNEFGSRKIRNQKPKDLGDYASATFAVC >Mature_142_residues ASLEFIESHKSSSKDFMRKRKLSFIDIFILILRKSVKSLQVILNEFILYRKKDYTVTASAFSQARKKMKHSAFSEINEGV VSLYYQDQKFKTCFGFRVLALDASKIILPTSVEIKNEFGSRKIRNQKPKDLGDYASATFAVC
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16465; Mature: 16334
Theoretical pI: Translated: 10.45; Mature: 10.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASLEFIESHKSSSKDFMRKRKLSFIDIFILILRKSVKSLQVILNEFILYRKKDYTVTAS CCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHH AFSQARKKMKHSAFSEINEGVVSLYYQDQKFKTCFGFRVLALDASKIILPTSVEIKNEFG HHHHHHHHHHHHHHHHHHHHHHHEEECCCHHHHHHCEEEEEECCCEEEECCCHHHHHHHC SRKIRNQKPKDLGDYASATFAVC CHHHCCCCCCCCHHHHHHHHCCC >Mature Secondary Structure ASLEFIESHKSSSKDFMRKRKLSFIDIFILILRKSVKSLQVILNEFILYRKKDYTVTAS CCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHH AFSQARKKMKHSAFSEINEGVVSLYYQDQKFKTCFGFRVLALDASKIILPTSVEIKNEFG HHHHHHHHHHHHHHHHHHHHHHHEEECCCHHHHHHCEEEEEECCCEEEECCCHHHHHHHC SRKIRNQKPKDLGDYASATFAVC CHHHCCCCCCCCHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA