| Definition | Wolbachia sp. wRi, complete genome. |
|---|---|
| Accession | NC_012416 |
| Length | 1,445,873 |
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The map label for this gene is 225630489
Identifier: 225630489
GI number: 225630489
Start: 800235
End: 801830
Strand: Reverse
Name: 225630489
Synonym: WRi_007390
Alternate gene names: NA
Gene position: 801830-800235 (Counterclockwise)
Preceding gene: 225630490
Following gene: 225630486
Centisome position: 55.46
GC content: 35.09
Gene sequence:
>1596_bases ATGGCTAAAGGAAATAATACCCTATTAATATTTGACTTTGATAACACTATCACTAATGGACACATGCACAATGCTCTTTC TAGGTTAAGCAAAAGTGACTTTAATTCTACTCAAAATAATGCAGCAACTGATAACGACATAAAAAATTTTCTAGAAAATA CAGACGGAATAAAAAATAAAGAGGGGTTAAAATCTGTACTGCAATCTGCACTTTCAAGTGGAATAGAAGTTAATATTGCA TCATATACAAAATATCCGGATGCTGTAAAAGAGGTTGTAAAGGATCACTTGGGTTTATTTGAAGAACAAACAGGTAGCAT TTCTGTATTTGGTGGGTTTCCAGGAGATTATGATAATCAGTTGCAAGAGTTAGATGTTAGAGAACAACAAAGTCAAGTCG GAAAGAATTTGCACATCTGTGAGGCAATTGTGAAGTATAAGAATAAACACGGTGAGTTGCCAAAAACTGTCATGCTAGTT GATGATGATGTAAAAAATATTCAAAAGATTAATGAGTTTGTTGCATCAATGAGCAAAAGAGGGGGATGGCTTAAAGAAAA TGGGCTGAGTGTTGAAGATATAAAAAACATTAAATTTGAAGGTGCGCGAGTGCCTAAAGAGGACAAAAATGTTGGTTATC TAGAAAGAGTACAAGAGTTTATCAGTCCTAGGAAAGAAGAGTCACCACAATTACCTCCTAAACTTAAGAATTTAAATGCA GTATCCCAGAATAATGAGGAGCCACCACAATTACTTCCTAAAAAAAGGAAATCAAGTGATGGTATGGTTGCTGATGGTGA GAATAAAAAACAAGATATTAAGGGCATGTTGTCATCTGAAACACAAGCAAACCCAACACGCTCAAAACGTCATGCAATGA TGCTTGACCCTCAGCAAATAGAATCTATACACCAGAATGCTGAAGAGCCACCACTAGGTAAAAAATACGCACATACTGAA ACCATCTCCTTATCAAAGGCATTTGATACAATCAGAGATTTTTTTCAAGATTGTGGTCAAAAAATAATAAATACTATTCA TAGATTACTAAAGAAGGAAGTAATAACAGGAGTTAAAGAGCAAGGCTATGATGTGAATAGTGAAAAAGGTAAAAGTGAAA TTACGATTTATGGTAATAAATTGATAGATATTGACAAAATAAAAACGGATTTTATTGATACCTCTCTAATTCGAATAATG GAATTGGGTGAGGAGAAAATCAAAGATCTTAACAATAATTATAAAGGTGATCAGCTAGGGCGAGAGATATCGAAATTATT GAACGCTGGTTCGCAAAAGGAAAATATAAACTCAAACTATAATGATGGAGAGCCTATATTCCAGACTCGTAAAGAGGCAT TGAACTATCCTCCGCAAAAGAAAGACATAAACTCGAACTCTGTGAGAGGAAACTATAATGGTGGAGAGCCTACACATCAG ACCGTTCAAGAAGCACGGAACTATCATCGGCAAAAGAAAGGTATAGACTCAAACCCTGTAAGCAAAAAACCACTTGCACC ACCAGTACCTCCTAAAAATTATACGGAAAAAGTTACGCAAAGCAGAAATGCAGGTGGGATTAAAATAGGTAAGTGA
Upstream 100 bases:
>100_bases CTTCCTTTTATTATTTTTCCTTCAGAAGTGCTATAATAAATAATTAATCTATTAATGTTAGTCTCTACCCATATGATTTG TAAGGATTAGAGGTGAAGAT
Downstream 100 bases:
>100_bases TTCATGTATAAAAGACAAGAGTTAACTGACAGAAGAATTAAAACTAATGTCAGGCTCTTGCTTAATACATATAATTGCTT ATATGTGTGGTTCATAGCAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 531; Mature: 530
Protein sequence:
>531_residues MAKGNNTLLIFDFDNTITNGHMHNALSRLSKSDFNSTQNNAATDNDIKNFLENTDGIKNKEGLKSVLQSALSSGIEVNIA SYTKYPDAVKEVVKDHLGLFEEQTGSISVFGGFPGDYDNQLQELDVREQQSQVGKNLHICEAIVKYKNKHGELPKTVMLV DDDVKNIQKINEFVASMSKRGGWLKENGLSVEDIKNIKFEGARVPKEDKNVGYLERVQEFISPRKEESPQLPPKLKNLNA VSQNNEEPPQLLPKKRKSSDGMVADGENKKQDIKGMLSSETQANPTRSKRHAMMLDPQQIESIHQNAEEPPLGKKYAHTE TISLSKAFDTIRDFFQDCGQKIINTIHRLLKKEVITGVKEQGYDVNSEKGKSEITIYGNKLIDIDKIKTDFIDTSLIRIM ELGEEKIKDLNNNYKGDQLGREISKLLNAGSQKENINSNYNDGEPIFQTRKEALNYPPQKKDINSNSVRGNYNGGEPTHQ TVQEARNYHRQKKGIDSNPVSKKPLAPPVPPKNYTEKVTQSRNAGGIKIGK
Sequences:
>Translated_531_residues MAKGNNTLLIFDFDNTITNGHMHNALSRLSKSDFNSTQNNAATDNDIKNFLENTDGIKNKEGLKSVLQSALSSGIEVNIA SYTKYPDAVKEVVKDHLGLFEEQTGSISVFGGFPGDYDNQLQELDVREQQSQVGKNLHICEAIVKYKNKHGELPKTVMLV DDDVKNIQKINEFVASMSKRGGWLKENGLSVEDIKNIKFEGARVPKEDKNVGYLERVQEFISPRKEESPQLPPKLKNLNA VSQNNEEPPQLLPKKRKSSDGMVADGENKKQDIKGMLSSETQANPTRSKRHAMMLDPQQIESIHQNAEEPPLGKKYAHTE TISLSKAFDTIRDFFQDCGQKIINTIHRLLKKEVITGVKEQGYDVNSEKGKSEITIYGNKLIDIDKIKTDFIDTSLIRIM ELGEEKIKDLNNNYKGDQLGREISKLLNAGSQKENINSNYNDGEPIFQTRKEALNYPPQKKDINSNSVRGNYNGGEPTHQ TVQEARNYHRQKKGIDSNPVSKKPLAPPVPPKNYTEKVTQSRNAGGIKIGK >Mature_530_residues AKGNNTLLIFDFDNTITNGHMHNALSRLSKSDFNSTQNNAATDNDIKNFLENTDGIKNKEGLKSVLQSALSSGIEVNIAS YTKYPDAVKEVVKDHLGLFEEQTGSISVFGGFPGDYDNQLQELDVREQQSQVGKNLHICEAIVKYKNKHGELPKTVMLVD DDVKNIQKINEFVASMSKRGGWLKENGLSVEDIKNIKFEGARVPKEDKNVGYLERVQEFISPRKEESPQLPPKLKNLNAV SQNNEEPPQLLPKKRKSSDGMVADGENKKQDIKGMLSSETQANPTRSKRHAMMLDPQQIESIHQNAEEPPLGKKYAHTET ISLSKAFDTIRDFFQDCGQKIINTIHRLLKKEVITGVKEQGYDVNSEKGKSEITIYGNKLIDIDKIKTDFIDTSLIRIME LGEEKIKDLNNNYKGDQLGREISKLLNAGSQKENINSNYNDGEPIFQTRKEALNYPPQKKDINSNSVRGNYNGGEPTHQT VQEARNYHRQKKGIDSNPVSKKPLAPPVPPKNYTEKVTQSRNAGGIKIGK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 59577; Mature: 59446
Theoretical pI: Translated: 8.97; Mature: 8.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKGNNTLLIFDFDNTITNGHMHNALSRLSKSDFNSTQNNAATDNDIKNFLENTDGIKNK CCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCH EGLKSVLQSALSSGIEVNIASYTKYPDAVKEVVKDHLGLFEEQTGSISVFGGFPGDYDNQ HHHHHHHHHHHHCCCEEEEHHHCCCHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCHHHH LQELDVREQQSQVGKNLHICEAIVKYKNKHGELPKTVMLVDDDVKNIQKINEFVASMSKR HHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCEEEEECHHHHHHHHHHHHHHHHHHC GGWLKENGLSVEDIKNIKFEGARVPKEDKNVGYLERVQEFISPRKEESPQLPPKLKNLNA CCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHCCCH VSQNNEEPPQLLPKKRKSSDGMVADGENKKQDIKGMLSSETQANPTRSKRHAMMLDPQQI HHCCCCCCHHHCCCCCCCCCCCEECCCCHHHHHHHHHHCCCCCCCCHHHCCCCCCCHHHH ESIHQNAEEPPLGKKYAHTETISLSKAFDTIRDFFQDCGQKIINTIHRLLKKEVITGVKE HHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QGYDVNSEKGKSEITIYGNKLIDIDKIKTDFIDTSLIRIMELGEEKIKDLNNNYKGDQLG CCCCCCCCCCCCEEEEECCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH REISKLLNAGSQKENINSNYNDGEPIFQTRKEALNYPPQKKDINSNSVRGNYNGGEPTHQ HHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHH TVQEARNYHRQKKGIDSNPVSKKPLAPPVPPKNYTEKVTQSRNAGGIKIGK HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure AKGNNTLLIFDFDNTITNGHMHNALSRLSKSDFNSTQNNAATDNDIKNFLENTDGIKNK CCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCH EGLKSVLQSALSSGIEVNIASYTKYPDAVKEVVKDHLGLFEEQTGSISVFGGFPGDYDNQ HHHHHHHHHHHHCCCEEEEHHHCCCHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCHHHH LQELDVREQQSQVGKNLHICEAIVKYKNKHGELPKTVMLVDDDVKNIQKINEFVASMSKR HHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCEEEEECHHHHHHHHHHHHHHHHHHC GGWLKENGLSVEDIKNIKFEGARVPKEDKNVGYLERVQEFISPRKEESPQLPPKLKNLNA CCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHCCCH VSQNNEEPPQLLPKKRKSSDGMVADGENKKQDIKGMLSSETQANPTRSKRHAMMLDPQQI HHCCCCCCHHHCCCCCCCCCCCEECCCCHHHHHHHHHHCCCCCCCCHHHCCCCCCCHHHH ESIHQNAEEPPLGKKYAHTETISLSKAFDTIRDFFQDCGQKIINTIHRLLKKEVITGVKE HHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QGYDVNSEKGKSEITIYGNKLIDIDKIKTDFIDTSLIRIMELGEEKIKDLNNNYKGDQLG CCCCCCCCCCCCEEEEECCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH REISKLLNAGSQKENINSNYNDGEPIFQTRKEALNYPPQKKDINSNSVRGNYNGGEPTHQ HHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHH TVQEARNYHRQKKGIDSNPVSKKPLAPPVPPKNYTEKVTQSRNAGGIKIGK HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA