| Definition | Wolbachia sp. wRi, complete genome. |
|---|---|
| Accession | NC_012416 |
| Length | 1,445,873 |
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The map label for this gene is 225630455
Identifier: 225630455
GI number: 225630455
Start: 761811
End: 762371
Strand: Reverse
Name: 225630455
Synonym: WRi_006990
Alternate gene names: NA
Gene position: 762371-761811 (Counterclockwise)
Preceding gene: 225630456
Following gene: 225630454
Centisome position: 52.73
GC content: 36.36
Gene sequence:
>561_bases ATGCCAATTTATATTAGATTTGAACATAACAAACAAGTAGAAACAACGACGCTTAAAAGCAAACCAGCTGGAAATGATTG GTATGAAGCGCCAGAAAATTTTGAATGGCAAAAGAGTTATTGTCTAACGGAAGGAGGAGAAATTGCTCAGCGTACTAAAG AAGATATACAAAAGGAGTTACTGGATAATGCGAAGCTCTGTGCATTTGACAATATTCGTACTCATTTTAATAACTTTACT AGTAGATTCTCAGGGCACTCTCATCAAAAGGCTAAGTCGTACGAGATTCAAGCAAAAACCGCGGAGAACATTTTAACAAC ACAAGAATCTATAGATGAGAAGGATGCAGCAATTATAGAGCCACTGGCAAGAGTGAGAGGGATTTCAGTAGTGGAGATGG CAAAAATAATAGAAGAGAAGGCAGAAAAAGCAGTAAAAGCAATAATTAAATGTGAAGAGCTTGAAGATTTAGCCAAGAGA AAGATTGAAGAAGCCAAAAGTGAAGAAGAGCTAGAGGACTTACTAAACAATTTTAAACAAAAGATGCAAAGAAATGGCTG A
Upstream 100 bases:
>100_bases CTACAGGACTTGAAGTAGATGTGGAAAGGACTCTCAGGGCTTGGCAATGCCCAGGATTAGATGCCACCCACAAAATCTGG AATTAAAACGGAGAAAACCA
Downstream 100 bases:
>100_bases AGAATTTTTACATGGAGTAAATGTTATTGAGGTAACCTCAGGAGCAAAGACAGTACGTACAGCTAAATCATCAGTGATAG GTGTAATTGGTACTGCCCCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 186; Mature: 185
Protein sequence:
>186_residues MPIYIRFEHNKQVETTTLKSKPAGNDWYEAPENFEWQKSYCLTEGGEIAQRTKEDIQKELLDNAKLCAFDNIRTHFNNFT SRFSGHSHQKAKSYEIQAKTAENILTTQESIDEKDAAIIEPLARVRGISVVEMAKIIEEKAEKAVKAIIKCEELEDLAKR KIEEAKSEEELEDLLNNFKQKMQRNG
Sequences:
>Translated_186_residues MPIYIRFEHNKQVETTTLKSKPAGNDWYEAPENFEWQKSYCLTEGGEIAQRTKEDIQKELLDNAKLCAFDNIRTHFNNFT SRFSGHSHQKAKSYEIQAKTAENILTTQESIDEKDAAIIEPLARVRGISVVEMAKIIEEKAEKAVKAIIKCEELEDLAKR KIEEAKSEEELEDLLNNFKQKMQRNG >Mature_185_residues PIYIRFEHNKQVETTTLKSKPAGNDWYEAPENFEWQKSYCLTEGGEIAQRTKEDIQKELLDNAKLCAFDNIRTHFNNFTS RFSGHSHQKAKSYEIQAKTAENILTTQESIDEKDAAIIEPLARVRGISVVEMAKIIEEKAEKAVKAIIKCEELEDLAKRK IEEAKSEEELEDLLNNFKQKMQRNG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21479; Mature: 21348
Theoretical pI: Translated: 5.24; Mature: 5.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPIYIRFEHNKQVETTTLKSKPAGNDWYEAPENFEWQKSYCLTEGGEIAQRTKEDIQKEL CCEEEEECCCCCCHHHHCCCCCCCCCCCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHH LDNAKLCAFDNIRTHFNNFTSRFSGHSHQKAKSYEIQAKTAENILTTQESIDEKDAAIIE HCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHH PLARVRGISVVEMAKIIEEKAEKAVKAIIKCEELEDLAKRKIEEAKSEEELEDLLNNFKQ HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH KMQRNG HHHCCC >Mature Secondary Structure PIYIRFEHNKQVETTTLKSKPAGNDWYEAPENFEWQKSYCLTEGGEIAQRTKEDIQKEL CEEEEECCCCCCHHHHCCCCCCCCCCCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHH LDNAKLCAFDNIRTHFNNFTSRFSGHSHQKAKSYEIQAKTAENILTTQESIDEKDAAIIE HCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHH PLARVRGISVVEMAKIIEEKAEKAVKAIIKCEELEDLAKRKIEEAKSEEELEDLLNNFKQ HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH KMQRNG HHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA