| Definition | Wolbachia sp. wRi, complete genome. |
|---|---|
| Accession | NC_012416 |
| Length | 1,445,873 |
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The map label for this gene is 225630454
Identifier: 225630454
GI number: 225630454
Start: 760667
End: 761818
Strand: Reverse
Name: 225630454
Synonym: WRi_006980
Alternate gene names: NA
Gene position: 761818-760667 (Counterclockwise)
Preceding gene: 225630455
Following gene: 225630453
Centisome position: 52.69
GC content: 38.28
Gene sequence:
>1152_bases ATGGCTGAAGAATTTTTACATGGAGTAAATGTTATTGAGGTAACCTCAGGAGCAAAGACAGTACGTACAGCTAAATCATC AGTGATAGGTGTAATTGGTACTGCCCCTGAAGCTGATGAGCAAAAATTTCCACTCAATAGTCCAGTATTAATAGCAGGAA GCTTAAAGGAAGCAGCAAAGCTTGGGAAAAGTGGAACACTACCTTCTGCAATAAACGGAATATTTTCCCAAATTGGTGCA ACAGTAGTAGTTATTCGAGTTGAAGAAAGTGAAACTATTCAAAATATAATTGGCGGTGTTGATAAAGAAACCGGAGAATA TCAGGGAATCGAGGCATTTCTCAGCAGTGAAAGTATAGTTCATGTGCTACCTAGAATACTAATTGCACCTCAGTTTACTC ACCAACTACCAGAAGATGGCAAAAATCCAGCGGTTGCAGCATTAGTTCCTATAGCAGAAAAGCTGAGAAGCATAATAGTA GCAGATGGACCAAATACCAATGATGAAGAAGCAATAAAATGGAGAAAAAGTGTGGGCAGCTCAAGAGTTTACGTAGTTGA TCCTTGGGTTAAGGTATTTATTGAAGGAAAAGAAGAAATTTTGCCTCCAAGTTCATTTGTAGCTGGTTTAATAGCGAAAG TAGATAGCGAGCAAGGATTTTGGCACTCACCTTCAAATAAAGAGATAAATGGTATTATTGGAACAAGCAGGCCTATTGAT TTTACGCTCGGTAATACAAATTGTAGAGCAAACCACTTAAATGAAAATGAAGTAACAACGATAATTCATCAAAATGGCTA TAGGCTTTGGGGAAATAGGACATGTTCAAACGATGCGAAATGGACTTTTCTATCAGTGAGGCGTACTGCAGATTTAATTA ACGATAGTTTACTTCGAGCTCATCTATGGGCAGTTGATCGCAATATTACCAAAACCTATATAGATGATGTGATTGAGGGG GTAAATTCTTATTTGGCCAATTTAAAAGCACAAGGAGCGATTATCAGTGGAAAATGTTATGCAACTCCCGAACTCAATAC ACCGGCAAATATTGCAAGCGGAAAAGTGTCTTTTGATTTTGAGTTTACACCGCCATATCCAGCTGAGCAGATTACTTTTA GGTCACACCTCGTGAGTGGTACAATATTGTAA
Upstream 100 bases:
>100_bases GAAGAGCTTGAAGATTTAGCCAAGAGAAAGATTGAAGAAGCCAAAAGTGAAGAAGAGCTAGAGGACTTACTAAACAATTT TAAACAAAAGATGCAAAGAA
Downstream 100 bases:
>100_bases AAAGGGAAAAAAGAGGAAAAAATGTTACCGAAGATTTTAAAGAATTTTAACGTATTCGTTGATGGTAGAGGTTATGCAGG GAAAATAGATGAAATTACGC
Product: phage tail sheath protein
Products: NA
Alternate protein names: Phage Tail Sheath Protein; Phage Tail Sheath Protein FI; Bacteriophage Tail Sheath Protein; Tail Sheath Protein FI; Phage Tail Sheath Protein; Phage-Related Tail Sheath Protein; Bacteriophage Tail Sheath Protein; LOW QUALITY PROTEIN Phage Tail Sheath Protein; Phage-Related Tail Protein; Phage TAIL SHEATH PROTEIN; Phage SPO1 DNA Polymerase-Related Protein; Phage Tail Sheath-Like Protein; Prophage; Prophage Tail Sheath; Phage P2 Tail Sheath FI-Like Protein; Phage Tail Sheath Family Protein; Phage Tail-Like Protein; Tail Sheath Protein Bacteriophage; Bacteriophage P2 Tail Sheath Protein GPFI; Phage Tail Sheath Protein FI-Like Protein; Pyocin R2_PP Tail Sheath Protein GpFI; Pyocin R2_PP Tail Sheath Protein; Bacteriophage Tail Sheath Protein FI; Phage-Related Tail Sheath Protein; Bacteriophage Contractile Tail Sheath Protein; Bacteriophage P2 Tail Sheath Protein
Number of amino acids: Translated: 383; Mature: 382
Protein sequence:
>383_residues MAEEFLHGVNVIEVTSGAKTVRTAKSSVIGVIGTAPEADEQKFPLNSPVLIAGSLKEAAKLGKSGTLPSAINGIFSQIGA TVVVIRVEESETIQNIIGGVDKETGEYQGIEAFLSSESIVHVLPRILIAPQFTHQLPEDGKNPAVAALVPIAEKLRSIIV ADGPNTNDEEAIKWRKSVGSSRVYVVDPWVKVFIEGKEEILPPSSFVAGLIAKVDSEQGFWHSPSNKEINGIIGTSRPID FTLGNTNCRANHLNENEVTTIIHQNGYRLWGNRTCSNDAKWTFLSVRRTADLINDSLLRAHLWAVDRNITKTYIDDVIEG VNSYLANLKAQGAIISGKCYATPELNTPANIASGKVSFDFEFTPPYPAEQITFRSHLVSGTIL
Sequences:
>Translated_383_residues MAEEFLHGVNVIEVTSGAKTVRTAKSSVIGVIGTAPEADEQKFPLNSPVLIAGSLKEAAKLGKSGTLPSAINGIFSQIGA TVVVIRVEESETIQNIIGGVDKETGEYQGIEAFLSSESIVHVLPRILIAPQFTHQLPEDGKNPAVAALVPIAEKLRSIIV ADGPNTNDEEAIKWRKSVGSSRVYVVDPWVKVFIEGKEEILPPSSFVAGLIAKVDSEQGFWHSPSNKEINGIIGTSRPID FTLGNTNCRANHLNENEVTTIIHQNGYRLWGNRTCSNDAKWTFLSVRRTADLINDSLLRAHLWAVDRNITKTYIDDVIEG VNSYLANLKAQGAIISGKCYATPELNTPANIASGKVSFDFEFTPPYPAEQITFRSHLVSGTIL >Mature_382_residues AEEFLHGVNVIEVTSGAKTVRTAKSSVIGVIGTAPEADEQKFPLNSPVLIAGSLKEAAKLGKSGTLPSAINGIFSQIGAT VVVIRVEESETIQNIIGGVDKETGEYQGIEAFLSSESIVHVLPRILIAPQFTHQLPEDGKNPAVAALVPIAEKLRSIIVA DGPNTNDEEAIKWRKSVGSSRVYVVDPWVKVFIEGKEEILPPSSFVAGLIAKVDSEQGFWHSPSNKEINGIIGTSRPIDF TLGNTNCRANHLNENEVTTIIHQNGYRLWGNRTCSNDAKWTFLSVRRTADLINDSLLRAHLWAVDRNITKTYIDDVIEGV NSYLANLKAQGAIISGKCYATPELNTPANIASGKVSFDFEFTPPYPAEQITFRSHLVSGTIL
Specific function: Unknown
COG id: COG3497
COG function: function code R; Phage tail sheath protein FI
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41543; Mature: 41411
Theoretical pI: Translated: 5.66; Mature: 5.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 0.3 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAEEFLHGVNVIEVTSGAKTVRTAKSSVIGVIGTAPEADEQKFPLNSPVLIAGSLKEAAK CCHHHHCCCCEEEECCCCHHHHHHHCCEEEEEECCCCCCCCCCCCCCCEEEECCHHHHHH LGKSGTLPSAINGIFSQIGATVVVIRVEESETIQNIIGGVDKETGEYQGIEAFLSSESIV CCCCCCCHHHHHHHHHHCCCEEEEEEECCHHHHHHHHCCCCCCCCCHHHHHHHHCCCHHH HVLPRILIAPQFTHQLPEDGKNPAVAALVPIAEKLRSIIVADGPNTNDEEAIKWRKSVGS HHHHHHHHCCHHHHCCCCCCCCCEEEHHHHHHHHHHHEEEECCCCCCHHHHHHHHHHCCC SRVYVVDPWVKVFIEGKEEILPPSSFVAGLIAKVDSEQGFWHSPSNKEINGIIGTSRPID CEEEEECHHHEEEECCHHHCCCCHHHHHHHHHHHCCCCCCEECCCCCCCCEEECCCCCEE FTLGNTNCRANHLNENEVTTIIHQNGYRLWGNRTCSNDAKWTFLSVRRTADLINDSLLRA EEECCCCCCCCCCCCCCEEEEEECCCEEEECCCCCCCCCCEEEEEHHHHHHHHHHHHHHH HLWAVDRNITKTYIDDVIEGVNSYLANLKAQGAIISGKCYATPELNTPANIASGKVSFDF HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCEEEECEEEECCCCCCCCCCCCCEEEEEE EFTPPYPAEQITFRSHLVSGTIL EECCCCCHHHHHHHHHHHCCCCC >Mature Secondary Structure AEEFLHGVNVIEVTSGAKTVRTAKSSVIGVIGTAPEADEQKFPLNSPVLIAGSLKEAAK CHHHHCCCCEEEECCCCHHHHHHHCCEEEEEECCCCCCCCCCCCCCCEEEECCHHHHHH LGKSGTLPSAINGIFSQIGATVVVIRVEESETIQNIIGGVDKETGEYQGIEAFLSSESIV CCCCCCCHHHHHHHHHHCCCEEEEEEECCHHHHHHHHCCCCCCCCCHHHHHHHHCCCHHH HVLPRILIAPQFTHQLPEDGKNPAVAALVPIAEKLRSIIVADGPNTNDEEAIKWRKSVGS HHHHHHHHCCHHHHCCCCCCCCCEEEHHHHHHHHHHHEEEECCCCCCHHHHHHHHHHCCC SRVYVVDPWVKVFIEGKEEILPPSSFVAGLIAKVDSEQGFWHSPSNKEINGIIGTSRPID CEEEEECHHHEEEECCHHHCCCCHHHHHHHHHHHCCCCCCEECCCCCCCCEEECCCCCEE FTLGNTNCRANHLNENEVTTIIHQNGYRLWGNRTCSNDAKWTFLSVRRTADLINDSLLRA EEECCCCCCCCCCCCCCEEEEEECCCEEEECCCCCCCCCCEEEEEHHHHHHHHHHHHHHH HLWAVDRNITKTYIDDVIEGVNSYLANLKAQGAIISGKCYATPELNTPANIASGKVSFDF HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCEEEECEEEECCCCCCCCCCCCCEEEEEE EFTPPYPAEQITFRSHLVSGTIL EECCCCCHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA