| Definition | Wolbachia sp. wRi, complete genome. |
|---|---|
| Accession | NC_012416 |
| Length | 1,445,873 |
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The map label for this gene is 225630456
Identifier: 225630456
GI number: 225630456
Start: 762386
End: 763852
Strand: Reverse
Name: 225630456
Synonym: WRi_007000
Alternate gene names: NA
Gene position: 763852-762386 (Counterclockwise)
Preceding gene: 225630457
Following gene: 225630455
Centisome position: 52.83
GC content: 34.9
Gene sequence:
>1467_bases ATGAAAGAAGCAATATACCAAAGGATAAAGGATTTAGCAGTAAGTAGCACAGCTGATCAACTGGCATATCTTGCAAAATC GCTGGAATTGATAGCAGATAAAAAAGCTATTTCCAACGTTGTGCAGATGACTGAAGTAAAAGGAATAATTGATGCACTAC AAAAAAGACTTAAGGATTTAGTAGCAAACAGTACACCAGATCAATTAGCATATCTTGCTAAAGCATTGGAATCAATAGTC GACAAAAGTGCGGTTTCTGAAATTGTGCAAATGACTGATGGTAAGTTAAAAGAACTTCTTGATAGTGCAAAAAAACACTT AAGTGACATAAACAGCAACAAAACAAACTCAATATCGTCCATAACTGCAGTAAAAACAGAGTCTGTTAATGAAATCAACA AGCTTAGGGATAATTCCTTAAACACTTTAAAAGCATCATCAGATTCGCATATATCGCTACTTGATACGAGAAAGAATGCC AATATTGCAGCAATAAATAGCATTAGTAACAGTCATAAAGATGGTCTTAAAGGTTTAGTAGAAGATTTTCGTGCTGTTAA TAATGTACCATCTGGCTCATCAATTATTAGGGAAATAGAAACTCGTGATAACCAATTAAAAACATCCCTGATAAATGAGG TAAAAACTCGGGATGAACAGTTAAAAGCGTCTCTTATAAATGAAATAAGAAAGCGTAATATGGCTGAACCAGGGTCATTA CCTTTCTTATTTGGTGTACTTGGAAGAAAAAATAATTATTTTGGCCACGGAACTTTTACGACAGAGCTTGGAAAGTGGAG TAGTGATATAACAAAAACTGACTATATGTTACAACTACTAGCAGGTAGCCATACGTACAATACAGATTACGTTAGTTTTT ATCGGCCAAGACAACTAAGTTTTATAGAGGGAAGCAAGGGAACATTTATTTACGGAGAGTTATGCACAAAAAGCTTTTCG GGTAGTTATGATGAGATATACTATTACCCATATGCTGCACTTGGAGTAGTATTTGTAAAAAATACAACGAATGTGAACAT AAATAAAACAATAGAATTTATTGGATCATCATACTCTAGTACGGAGTATGGGGGTGCAGGACTATTTGTGGGAACACCAG ATAATACTAATTCTAATAAATCAAGTATTTCAAAAATAGTATGGAAAAATGTTTACCAATACACGAGTTCTGATAGCAAA TTAGCTGGATCTGGTAATGTGGAGATTCCAGCAGGAAAAACAGTTGCAATATTACTTTACACATCATCTTACCTATGTTC CAGAACACAAGTCAGTCAAGGTATGCTTGCATCAAATTATGTATACAACTATGGTCAATTTATCCAGTGGGGAATATATA ACATACGTAGCAATTTTCTGACTACAGGACTTGAAGTAGATGTGGAAAGGACTCTCAGGGCTTGGCAATGCCCAGGATTA GATGCCACCCACAAAATCTGGAATTAA
Upstream 100 bases:
>100_bases AGAAAATAGATGAGGATATGAGTAAGGGAGAAAATAAACATAATCAACTGAAAAGTAATTTTGAACGATTTAGATTTGAA ACTTTTTTGAATTTTTGGGA
Downstream 100 bases:
>100_bases AACGGAGAAAACCAATGCCAATTTATATTAGATTTGAACATAACAAACAAGTAGAAACAACGACGCTTAAAAGCAAACCA GCTGGAAATGATTGGTATGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 488; Mature: 488
Protein sequence:
>488_residues MKEAIYQRIKDLAVSSTADQLAYLAKSLELIADKKAISNVVQMTEVKGIIDALQKRLKDLVANSTPDQLAYLAKALESIV DKSAVSEIVQMTDGKLKELLDSAKKHLSDINSNKTNSISSITAVKTESVNEINKLRDNSLNTLKASSDSHISLLDTRKNA NIAAINSISNSHKDGLKGLVEDFRAVNNVPSGSSIIREIETRDNQLKTSLINEVKTRDEQLKASLINEIRKRNMAEPGSL PFLFGVLGRKNNYFGHGTFTTELGKWSSDITKTDYMLQLLAGSHTYNTDYVSFYRPRQLSFIEGSKGTFIYGELCTKSFS GSYDEIYYYPYAALGVVFVKNTTNVNINKTIEFIGSSYSSTEYGGAGLFVGTPDNTNSNKSSISKIVWKNVYQYTSSDSK LAGSGNVEIPAGKTVAILLYTSSYLCSRTQVSQGMLASNYVYNYGQFIQWGIYNIRSNFLTTGLEVDVERTLRAWQCPGL DATHKIWN
Sequences:
>Translated_488_residues MKEAIYQRIKDLAVSSTADQLAYLAKSLELIADKKAISNVVQMTEVKGIIDALQKRLKDLVANSTPDQLAYLAKALESIV DKSAVSEIVQMTDGKLKELLDSAKKHLSDINSNKTNSISSITAVKTESVNEINKLRDNSLNTLKASSDSHISLLDTRKNA NIAAINSISNSHKDGLKGLVEDFRAVNNVPSGSSIIREIETRDNQLKTSLINEVKTRDEQLKASLINEIRKRNMAEPGSL PFLFGVLGRKNNYFGHGTFTTELGKWSSDITKTDYMLQLLAGSHTYNTDYVSFYRPRQLSFIEGSKGTFIYGELCTKSFS GSYDEIYYYPYAALGVVFVKNTTNVNINKTIEFIGSSYSSTEYGGAGLFVGTPDNTNSNKSSISKIVWKNVYQYTSSDSK LAGSGNVEIPAGKTVAILLYTSSYLCSRTQVSQGMLASNYVYNYGQFIQWGIYNIRSNFLTTGLEVDVERTLRAWQCPGL DATHKIWN >Mature_488_residues MKEAIYQRIKDLAVSSTADQLAYLAKSLELIADKKAISNVVQMTEVKGIIDALQKRLKDLVANSTPDQLAYLAKALESIV DKSAVSEIVQMTDGKLKELLDSAKKHLSDINSNKTNSISSITAVKTESVNEINKLRDNSLNTLKASSDSHISLLDTRKNA NIAAINSISNSHKDGLKGLVEDFRAVNNVPSGSSIIREIETRDNQLKTSLINEVKTRDEQLKASLINEIRKRNMAEPGSL PFLFGVLGRKNNYFGHGTFTTELGKWSSDITKTDYMLQLLAGSHTYNTDYVSFYRPRQLSFIEGSKGTFIYGELCTKSFS GSYDEIYYYPYAALGVVFVKNTTNVNINKTIEFIGSSYSSTEYGGAGLFVGTPDNTNSNKSSISKIVWKNVYQYTSSDSK LAGSGNVEIPAGKTVAILLYTSSYLCSRTQVSQGMLASNYVYNYGQFIQWGIYNIRSNFLTTGLEVDVERTLRAWQCPGL DATHKIWN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 54048; Mature: 54048
Theoretical pI: Translated: 9.09; Mature: 9.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKEAIYQRIKDLAVSSTADQLAYLAKSLELIADKKAISNVVQMTEVKGIIDALQKRLKDL CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VANSTPDQLAYLAKALESIVDKSAVSEIVQMTDGKLKELLDSAKKHLSDINSNKTNSISS HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCHHH ITAVKTESVNEINKLRDNSLNTLKASSDSHISLLDTRKNANIAAINSISNSHKDGLKGLV EEEEHHHHHHHHHHHHCCCCCEEECCCCCCEEEEECCCCCCEEEEECCCCCHHHHHHHHH EDFRAVNNVPSGSSIIREIETRDNQLKTSLINEVKTRDEQLKASLINEIRKRNMAEPGSL HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC PFLFGVLGRKNNYFGHGTFTTELGKWSSDITKTDYMLQLLAGSHTYNTDYVSFYRPRQLS CHHHHHHCCCCCCCCCCEEEHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCEEEECCCEEE FIEGSKGTFIYGELCTKSFSGSYDEIYYYPYAALGVVFVKNTTNVNINKTIEFIGSSYSS EEECCCCCEEEHHHHHHCCCCCCCEEEEECHHHEEEEEEECCCCCCHHHHHHHHCCCCCC TEYGGAGLFVGTPDNTNSNKSSISKIVWKNVYQYTSSDSKLAGSGNVEIPAGKTVAILLY CCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCEEEEEEE TSSYLCSRTQVSQGMLASNYVYNYGQFIQWGIYNIRSNFLTTGLEVDVERTLRAWQCPGL ECHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHCCCCC DATHKIWN CCHHCCCC >Mature Secondary Structure MKEAIYQRIKDLAVSSTADQLAYLAKSLELIADKKAISNVVQMTEVKGIIDALQKRLKDL CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VANSTPDQLAYLAKALESIVDKSAVSEIVQMTDGKLKELLDSAKKHLSDINSNKTNSISS HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCHHH ITAVKTESVNEINKLRDNSLNTLKASSDSHISLLDTRKNANIAAINSISNSHKDGLKGLV EEEEHHHHHHHHHHHHCCCCCEEECCCCCCEEEEECCCCCCEEEEECCCCCHHHHHHHHH EDFRAVNNVPSGSSIIREIETRDNQLKTSLINEVKTRDEQLKASLINEIRKRNMAEPGSL HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC PFLFGVLGRKNNYFGHGTFTTELGKWSSDITKTDYMLQLLAGSHTYNTDYVSFYRPRQLS CHHHHHHCCCCCCCCCCEEEHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCEEEECCCEEE FIEGSKGTFIYGELCTKSFSGSYDEIYYYPYAALGVVFVKNTTNVNINKTIEFIGSSYSS EEECCCCCEEEHHHHHHCCCCCCCEEEEECHHHEEEEEEECCCCCCHHHHHHHHCCCCCC TEYGGAGLFVGTPDNTNSNKSSISKIVWKNVYQYTSSDSKLAGSGNVEIPAGKTVAILLY CCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCEEEEEEE TSSYLCSRTQVSQGMLASNYVYNYGQFIQWGIYNIRSNFLTTGLEVDVERTLRAWQCPGL ECHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHCCCCC DATHKIWN CCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA