| Definition | Wolbachia sp. wRi, complete genome. |
|---|---|
| Accession | NC_012416 |
| Length | 1,445,873 |
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The map label for this gene is 225630306
Identifier: 225630306
GI number: 225630306
Start: 556835
End: 557932
Strand: Reverse
Name: 225630306
Synonym: WRi_005260
Alternate gene names: NA
Gene position: 557932-556835 (Counterclockwise)
Preceding gene: 225630307
Following gene: 225630304
Centisome position: 38.59
GC content: 31.69
Gene sequence:
>1098_bases GTGGTAGGTTTATTGTTTCAATTATACAATAAGGTTCAATCTATAATTGACCCACATGATAAAAAGGTTCAACCTATAGT TGACCCACGTGATAAAAATGCTACAGAGGGTATTTCGCAAGAGAAATTAATTGTACAAGAAGTTTCCAAAGATGAATGTA TGTTTGATAATAATCCTGAAGTACAATATATATTGTCAGACTTTGATAATTTAGATTTCTCAAATGGTCCATTTAACTAT TCTTTGTATGATATAAATTATAATGAAGGTAAAGAGGCAAATCCATTCGATAAAATAGCAAAATATTATGGAAGAAAGAA AAATGTTTTTCTTTTTATCTCCATGCTGCAGAACAGTGAACAGTTAGAAAAAATAATCAATATAATAGGTGAGAAATGTA ATGCTCAAGATAGAAAGAAATTCACAGAAAGATTGAATATATATTTGGGTAGAATTAGAGAGGGGGACCAGGATGCAAAA GAATTATTAAATGGCGATTTCCCTGGTGCTTTTTTTAATGGACCTCATATTGGAAAAAATCGCAATATTCATCAGAATCT TAATATTAAAATTAAACCTGGGCAAACTTTAGAAGTTAGTAGCTTATTCAACAAAAAAAGTGAATTAGAAAGAGAAAAAA TATACAACGAAAAAGGTCAAAGAATAGCAACGATTGAGAAGAATGAGAAACAACAGAGGAACTACTCCTTTACAAAATTT GCAATATGTGACACCGAAATTAGTTGGGGTGCAAAAGATGAATCTGAAAAAGGCCTTAATTGCGCTGTTGTTTTAAATAT AAATTTAGGTCAAGTTAGTATTAAAAAATCAACTATTGACGGTAAAGATGTTGAACCAAAGAAAATTTTAGAGTTAACTA AGCAAAACGAGGCTGTGCTTATAAAAGGTAAAGCTTTACATGAAGTTTTAGCAGCACATTTCATTAAGCAAACACCATGT GAGGAAAAAGAGAACATACAACCACACGAGAATATCATTGTACCTGATTCTGGTGCACCTAGCTCGGCTATTGATGAGAA AATAACTGTAGAGCATCCGTTCGGGAAAGCAGCAAATAAGATGGACAGAGAAGAATAA
Upstream 100 bases:
>100_bases GTTAATTATTTTTCAATACACCTAAACTTTAGCTTTACAATACTGATATTAGAATATACTATTTATATTGTTTCTATCTT AAGAAAAAGGAGGTCCTGGA
Downstream 100 bases:
>100_bases TAAAGATAATCATAGAGAAAATGTGAGGTAACATGGTTGATTCTTTAGAATTGTGCGAAAATTTACAGCAAAAAATAAAA AAGTTAGAAGCAAAAATAGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 365; Mature: 365
Protein sequence:
>365_residues MVGLLFQLYNKVQSIIDPHDKKVQPIVDPRDKNATEGISQEKLIVQEVSKDECMFDNNPEVQYILSDFDNLDFSNGPFNY SLYDINYNEGKEANPFDKIAKYYGRKKNVFLFISMLQNSEQLEKIINIIGEKCNAQDRKKFTERLNIYLGRIREGDQDAK ELLNGDFPGAFFNGPHIGKNRNIHQNLNIKIKPGQTLEVSSLFNKKSELEREKIYNEKGQRIATIEKNEKQQRNYSFTKF AICDTEISWGAKDESEKGLNCAVVLNINLGQVSIKKSTIDGKDVEPKKILELTKQNEAVLIKGKALHEVLAAHFIKQTPC EEKENIQPHENIIVPDSGAPSSAIDEKITVEHPFGKAANKMDREE
Sequences:
>Translated_365_residues MVGLLFQLYNKVQSIIDPHDKKVQPIVDPRDKNATEGISQEKLIVQEVSKDECMFDNNPEVQYILSDFDNLDFSNGPFNY SLYDINYNEGKEANPFDKIAKYYGRKKNVFLFISMLQNSEQLEKIINIIGEKCNAQDRKKFTERLNIYLGRIREGDQDAK ELLNGDFPGAFFNGPHIGKNRNIHQNLNIKIKPGQTLEVSSLFNKKSELEREKIYNEKGQRIATIEKNEKQQRNYSFTKF AICDTEISWGAKDESEKGLNCAVVLNINLGQVSIKKSTIDGKDVEPKKILELTKQNEAVLIKGKALHEVLAAHFIKQTPC EEKENIQPHENIIVPDSGAPSSAIDEKITVEHPFGKAANKMDREE >Mature_365_residues MVGLLFQLYNKVQSIIDPHDKKVQPIVDPRDKNATEGISQEKLIVQEVSKDECMFDNNPEVQYILSDFDNLDFSNGPFNY SLYDINYNEGKEANPFDKIAKYYGRKKNVFLFISMLQNSEQLEKIINIIGEKCNAQDRKKFTERLNIYLGRIREGDQDAK ELLNGDFPGAFFNGPHIGKNRNIHQNLNIKIKPGQTLEVSSLFNKKSELEREKIYNEKGQRIATIEKNEKQQRNYSFTKF AICDTEISWGAKDESEKGLNCAVVLNINLGQVSIKKSTIDGKDVEPKKILELTKQNEAVLIKGKALHEVLAAHFIKQTPC EEKENIQPHENIIVPDSGAPSSAIDEKITVEHPFGKAANKMDREE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41637; Mature: 41637
Theoretical pI: Translated: 6.21; Mature: 6.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVGLLFQLYNKVQSIIDPHDKKVQPIVDPRDKNATEGISQEKLIVQEVSKDECMFDNNPE CHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCC VQYILSDFDNLDFSNGPFNYSLYDINYNEGKEANPFDKIAKYYGRKKNVFLFISMLQNSE EEEEECCCCCCCCCCCCCEEEEEEEECCCCCCCCHHHHHHHHHCCCCCEEEEEEHHCCHH QLEKIINIIGEKCNAQDRKKFTERLNIYLGRIREGDQDAKELLNGDFPGAFFNGPHIGKN HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCCCCCCCC RNIHQNLNIKIKPGQTLEVSSLFNKKSELEREKIYNEKGQRIATIEKNEKQQRNYSFTKF CCCCCCCEEEECCCCEEEHHHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHCCCEEEE AICDTEISWGAKDESEKGLNCAVVLNINLGQVSIKKSTIDGKDVEPKKILELTKQNEAVL EEECCCCCCCCCCCCCCCCEEEEEEEECCCEEEEEECCCCCCCCCHHHHHHHHCCCCEEE IKGKALHEVLAAHFIKQTPCEEKENIQPHENIIVPDSGAPSSAIDEKITVEHPFGKAANK EECHHHHHHHHHHHHHCCCCCCHHCCCCCCCEEECCCCCCCHHCCCCEEEECCCCHHHHH MDREE CCCCC >Mature Secondary Structure MVGLLFQLYNKVQSIIDPHDKKVQPIVDPRDKNATEGISQEKLIVQEVSKDECMFDNNPE CHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCC VQYILSDFDNLDFSNGPFNYSLYDINYNEGKEANPFDKIAKYYGRKKNVFLFISMLQNSE EEEEECCCCCCCCCCCCCEEEEEEEECCCCCCCCHHHHHHHHHCCCCCEEEEEEHHCCHH QLEKIINIIGEKCNAQDRKKFTERLNIYLGRIREGDQDAKELLNGDFPGAFFNGPHIGKN HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCCCCCCCC RNIHQNLNIKIKPGQTLEVSSLFNKKSELEREKIYNEKGQRIATIEKNEKQQRNYSFTKF CCCCCCCEEEECCCCEEEHHHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHCCCEEEE AICDTEISWGAKDESEKGLNCAVVLNINLGQVSIKKSTIDGKDVEPKKILELTKQNEAVL EEECCCCCCCCCCCCCCCCEEEEEEEECCCEEEEEECCCCCCCCCHHHHHHHHCCCCEEE IKGKALHEVLAAHFIKQTPCEEKENIQPHENIIVPDSGAPSSAIDEKITVEHPFGKAANK EECHHHHHHHHHHHHHCCCCCCHHCCCCCCCEEECCCCCCCHHCCCCEEEECCCCHHHHH MDREE CCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA