Click here to switch to the map view.

The map label for this gene is 225630224

Identifier: 225630224

GI number: 225630224

Start: 462784

End: 462930

Strand: Reverse

Name: 225630224

Synonym: WRi_004300

Alternate gene names: NA

Gene position: 462930-462784 (Counterclockwise)

Preceding gene: 225630225

Following gene: 225630223

Centisome position: 32.02

GC content: 27.21

Gene sequence:

>147_bases
ATGACACCATTTGCTGTCTTTAAAAATGAATGTTCTTACAATTGTGCGTCATGCGCTTTATTAAATATTTTACTTAAAAA
TCTAATTTCTTATTATACAAGAGATAAGCAATTCATTGATGATGAAAAATTACAAAAAGGGGCATAG

Upstream 100 bases:

>100_bases
TGTTAGCGGATGAGATACCGCGAATGAATCGCGGTATGACGGTCTGCGGCGGTATGATGGTCTGCGGCGGTATGACGTAG
AGCTCGCGTCAGCTACTTTC

Downstream 100 bases:

>100_bases
AAAGCGCCTAAGGGAGAAAATTATTTTAGATAATGGACAATCATTACTTGATTATGAGGTTTTAGAGCACATTTTATATT
CAGCATACAGTAGAATTGAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 48; Mature: 47

Protein sequence:

>48_residues
MTPFAVFKNECSYNCASCALLNILLKNLISYYTRDKQFIDDEKLQKGA

Sequences:

>Translated_48_residues
MTPFAVFKNECSYNCASCALLNILLKNLISYYTRDKQFIDDEKLQKGA
>Mature_47_residues
TPFAVFKNECSYNCASCALLNILLKNLISYYTRDKQFIDDEKLQKGA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 5522; Mature: 5391

Theoretical pI: Translated: 8.03; Mature: 8.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

6.2 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
8.3 %Cys+Met (Translated Protein)
6.4 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
6.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTPFAVFKNECSYNCASCALLNILLKNLISYYTRDKQFIDDEKLQKGA
CCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCC
>Mature Secondary Structure 
TPFAVFKNECSYNCASCALLNILLKNLISYYTRDKQFIDDEKLQKGA
CCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA