Click here to switch to the map view.

The map label for this gene is 225630225

Identifier: 225630225

GI number: 225630225

Start: 463621

End: 464217

Strand: Reverse

Name: 225630225

Synonym: WRi_004310

Alternate gene names: NA

Gene position: 464217-463621 (Counterclockwise)

Preceding gene: 225630227

Following gene: 225630224

Centisome position: 32.11

GC content: 35.18

Gene sequence:

>597_bases
ATGTTACATAAATTTTTTAATCGTTTATTTTCTATTTTTTCTTCTATAAATGTTATTCAAAAGGTAAAGAAAGATGAAAA
TGGGATATGTTATGTAACGGGCCTCAGGCGCTATATATCAGTATTGCTTGATTTGATTATTATCGTTTTGTTCTTGCAGT
TTTGCAGCCAAGCCTTAAATCAGCTCTTTATGAACTCAGAGGATAGCAAAATATTAAGTCAAATTGCTGCAAAATCCCCA
ATGCAAGCACCACTGTCTGCGGAAGAAAAGACAACGCAGAGTAGACTTATAAAATTACTAATCCTAAATCAAATAGTCCA
GTTTATTATGCTCTTTTGCTATGTTACATATATGTGGGTAAAGTTTGCTACTACACCTGGAAAACTATTATTTGGGCTCA
GAGTTGTGGATGCACAAACCTTCAGAAAAATGACTTTAAGGCAAGCAACTAAGAGATTTTTTTCCTTTATATTGTCAGTT
GCACCATTATTCTTGGGCTTGTTATGGTCAAATTTCAACAAACGCTGTCAAACTTGGCACGATAAGATCGCAGGCACAGT
GGTTGTCACGAGTAAAAGCCTTAGAAGGCAGAGCTAA

Upstream 100 bases:

>100_bases
TGGTGGAATGGTAGACACGGCAGACTCAAAATCTGTTGCTTGCAAAAGCATGCTGGTTCAAGTCCGGCCAGGGGCACGTT
AAATATTGGAAAGTATATAT

Downstream 100 bases:

>100_bases
AAACTACTTGACACCCTTCGCCAGCCCCTTTATCATGATACTGAAGGTGTTCATTTATCTTCAATCTGTGCAGATTAAAC
AGCAAGAAAACAACGTAGTT

Product: hypothetical protein

Products: NA

Alternate protein names: RDD Domain Containing Protein; RDD Domain-Containing Protein; Membrane RDD Family Protein; Branched-Chain Amino Acid Aminotransferase I

Number of amino acids: Translated: 198; Mature: 198

Protein sequence:

>198_residues
MLHKFFNRLFSIFSSINVIQKVKKDENGICYVTGLRRYISVLLDLIIIVLFLQFCSQALNQLFMNSEDSKILSQIAAKSP
MQAPLSAEEKTTQSRLIKLLILNQIVQFIMLFCYVTYMWVKFATTPGKLLFGLRVVDAQTFRKMTLRQATKRFFSFILSV
APLFLGLLWSNFNKRCQTWHDKIAGTVVVTSKSLRRQS

Sequences:

>Translated_198_residues
MLHKFFNRLFSIFSSINVIQKVKKDENGICYVTGLRRYISVLLDLIIIVLFLQFCSQALNQLFMNSEDSKILSQIAAKSP
MQAPLSAEEKTTQSRLIKLLILNQIVQFIMLFCYVTYMWVKFATTPGKLLFGLRVVDAQTFRKMTLRQATKRFFSFILSV
APLFLGLLWSNFNKRCQTWHDKIAGTVVVTSKSLRRQS
>Mature_198_residues
MLHKFFNRLFSIFSSINVIQKVKKDENGICYVTGLRRYISVLLDLIIIVLFLQFCSQALNQLFMNSEDSKILSQIAAKSP
MQAPLSAEEKTTQSRLIKLLILNQIVQFIMLFCYVTYMWVKFATTPGKLLFGLRVVDAQTFRKMTLRQATKRFFSFILSV
APLFLGLLWSNFNKRCQTWHDKIAGTVVVTSKSLRRQS

Specific function: Unknown

COG id: COG1714

COG function: function code S; Predicted membrane protein/domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22906; Mature: 22906

Theoretical pI: Translated: 10.89; Mature: 10.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLHKFFNRLFSIFSSINVIQKVKKDENGICYVTGLRRYISVLLDLIIIVLFLQFCSQALN
CHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QLFMNSEDSKILSQIAAKSPMQAPLSAEEKTTQSRLIKLLILNQIVQFIMLFCYVTYMWV
HHHCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KFATTPGKLLFGLRVVDAQTFRKMTLRQATKRFFSFILSVAPLFLGLLWSNFNKRCQTWH
HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DKIAGTVVVTSKSLRRQS
HHHHHHHEEECHHHHCCC
>Mature Secondary Structure
MLHKFFNRLFSIFSSINVIQKVKKDENGICYVTGLRRYISVLLDLIIIVLFLQFCSQALN
CHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QLFMNSEDSKILSQIAAKSPMQAPLSAEEKTTQSRLIKLLILNQIVQFIMLFCYVTYMWV
HHHCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KFATTPGKLLFGLRVVDAQTFRKMTLRQATKRFFSFILSVAPLFLGLLWSNFNKRCQTWH
HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DKIAGTVVVTSKSLRRQS
HHHHHHHEEECHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA