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The map label for this gene is 225629876

Identifier: 225629876

GI number: 225629876

Start: 4300

End: 4980

Strand: Direct

Name: 225629876

Synonym: WRi_000050

Alternate gene names: NA

Gene position: 4300-4980 (Clockwise)

Preceding gene: 225629875

Following gene: 225629877

Centisome position: 0.3

GC content: 30.69

Gene sequence:

>681_bases
ATGCTAAGATTTTTTAAGCGAGAGAAAAGTACTGAATCGTTAGATAAGGATATAAATTGGAATTCAAACCGCTACAGCAC
AGTTATTGCTCAAAGGAATATTCTACTTTTATTTGCGTTAATATTATTAGCAACGATCTCTATCAGCATATTAGTCATAT
TTAAAATTAGCACAAGTAGCACTATTGAGCCATTTGTTATAGAAATTGACAAGAAATCGGGAATAGTGCAATTGGTTGAT
CCTGTCACAGTAAAGCAGTATTCTGCAGATGAAGCGCTGAACGATTATTTTATTTCAGAGTATATAAAAGCAAGGGAGGT
TTTTGATCCATATCATTATAATTATAACTATTATACAAAGGTGAGGTTGTTTTCCTCACCTAATGTGTATAATGAATTTA
GAAATTATATAGGATCGCAGAATATGGATGATCTTTTTAATTTATATTCAGATACCAAAAATGAATTTAAAATTCGCTCG
ATTCAAAAATTGGGTAACGATGCTCTTCAGGTGAGGTTTTTTGTGGAATTTATACGGAAAGATGGAAGTTCCACAAGAAA
AAATAAGATAGTTATTATGTCATATAGATATGCATCGCTTGAAATGAATGATCAGCAAAGATATATTAACCCATTAGGGT
TTCAAGTTATTTCATATAGAGTAGATGATGAATATGTATAG

Upstream 100 bases:

>100_bases
GCTAGGCCATAAGTTAAGAGTTTTTTAGCTTTTTTGTTGTAACTACTTTGTTAATTTGCTATGTTTATTAACACAAGTTA
AGATTTTTAAGAATATTAAA

Downstream 100 bases:

>100_bases
GATATTATTAGTTTTAGTTTTACTTGTAAGTAGCAATTTAAACGCATCCATTAATTATAATGAACCTATTTCTGTAGATA
GTAGAATAAAGACTTTTGTG

Product: type IV secretion system protein VirB8

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 226; Mature: 226

Protein sequence:

>226_residues
MLRFFKREKSTESLDKDINWNSNRYSTVIAQRNILLLFALILLATISISILVIFKISTSSTIEPFVIEIDKKSGIVQLVD
PVTVKQYSADEALNDYFISEYIKAREVFDPYHYNYNYYTKVRLFSSPNVYNEFRNYIGSQNMDDLFNLYSDTKNEFKIRS
IQKLGNDALQVRFFVEFIRKDGSSTRKNKIVIMSYRYASLEMNDQQRYINPLGFQVISYRVDDEYV

Sequences:

>Translated_226_residues
MLRFFKREKSTESLDKDINWNSNRYSTVIAQRNILLLFALILLATISISILVIFKISTSSTIEPFVIEIDKKSGIVQLVD
PVTVKQYSADEALNDYFISEYIKAREVFDPYHYNYNYYTKVRLFSSPNVYNEFRNYIGSQNMDDLFNLYSDTKNEFKIRS
IQKLGNDALQVRFFVEFIRKDGSSTRKNKIVIMSYRYASLEMNDQQRYINPLGFQVISYRVDDEYV
>Mature_226_residues
MLRFFKREKSTESLDKDINWNSNRYSTVIAQRNILLLFALILLATISISILVIFKISTSSTIEPFVIEIDKKSGIVQLVD
PVTVKQYSADEALNDYFISEYIKAREVFDPYHYNYNYYTKVRLFSSPNVYNEFRNYIGSQNMDDLFNLYSDTKNEFKIRS
IQKLGNDALQVRFFVEFIRKDGSSTRKNKIVIMSYRYASLEMNDQQRYINPLGFQVISYRVDDEYV

Specific function: Unknown

COG id: COG3736

COG function: function code U; Type IV secretory pathway, component VirB8

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007430 [H]

Pfam domain/function: PF04335 VirB8 [H]

EC number: NA

Molecular weight: Translated: 26717; Mature: 26717

Theoretical pI: Translated: 8.94; Mature: 8.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLRFFKREKSTESLDKDINWNSNRYSTVIAQRNILLLFALILLATISISILVIFKISTSS
CCCCHHHCCCHHHHHCCCCCCCCCEEEHHHHCHHHHHHHHHHHHHHHEEEEEEEEECCCC
TIEPFVIEIDKKSGIVQLVDPVTVKQYSADEALNDYFISEYIKAREVFDPYHYNYNYYTK
CCCCEEEEEECCCCEEEEECCCCHHHCCHHHHHHHHHHHHHHHHHHHCCCEECCCEEEEE
VRLFSSPNVYNEFRNYIGSQNMDDLFNLYSDTKNEFKIRSIQKLGNDALQVRFFVEFIRK
EEEECCCCHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHHHHC
DGSSTRKNKIVIMSYRYASLEMNDQQRYINPLGFQVISYRVDDEYV
CCCCCCCCEEEEEEEEEEEEEECCHHHHCCCCCEEEEEEECCCCCC
>Mature Secondary Structure
MLRFFKREKSTESLDKDINWNSNRYSTVIAQRNILLLFALILLATISISILVIFKISTSS
CCCCHHHCCCHHHHHCCCCCCCCCEEEHHHHCHHHHHHHHHHHHHHHEEEEEEEEECCCC
TIEPFVIEIDKKSGIVQLVDPVTVKQYSADEALNDYFISEYIKAREVFDPYHYNYNYYTK
CCCCEEEEEECCCCEEEEECCCCHHHCCHHHHHHHHHHHHHHHHHHHCCCEECCCEEEEE
VRLFSSPNVYNEFRNYIGSQNMDDLFNLYSDTKNEFKIRSIQKLGNDALQVRFFVEFIRK
EEEECCCCHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHHHHC
DGSSTRKNKIVIMSYRYASLEMNDQQRYINPLGFQVISYRVDDEYV
CCCCCCCCEEEEEEEEEEEEEECCHHHHCCCCCEEEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9823893 [H]