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The map label for this gene is dnaQ [H]

Identifier: 222526548

GI number: 222526548

Start: 4130890

End: 4131726

Strand: Reverse

Name: dnaQ [H]

Synonym: Chy400_3315

Alternate gene names: 222526548

Gene position: 4131726-4130890 (Counterclockwise)

Preceding gene: 222526549

Following gene: 222526547

Centisome position: 78.42

GC content: 56.03

Gene sequence:

>837_bases
ATGACAGGCATTGAACTACAACAACCCATTACCGACGTGCCGCTCATCTTCTTCGATGTTGAGACGACCGGGCTTGAGAT
TCAGGCCGGTCATCGCATCTGCGAAGTGGCCATGCTCCGCTGGGAGCATGGCCAGGAGGTGGGCAGGATTAATACGTTAA
TTAATCCCGAACGCGAACTCGATCCGCAGGCAGCCCAAATTAACGGTCTTCAGCCGGCAGAACTGAACAATGCGCCTTTA
TTTACCGACATTGCGCCACAGGTTGTTCAACTCAGTCAGAATGCGGTGCGTATCGCCCACAACCTTCCCTTCGACGAGTC
CTTTTTGAATATGGAACTGTGTCGGGCCGGTTATCCACCCTTTACCGGCCCGGCGCTCGACACCCTCGAACTGGCCCGAC
GCCTCGGTATCCGTCGCGGTTCACTGAGCCTGGCGGCACTGGCCACGACGTTCGGCCTGCCGGCACCCACCCATCGGGCA
ATGGATGACGTGTTGACCCTACGCGCACTCTTTGATCATTTCGTCAATGAAATGATTAGCTTCGGTATCATAACCCTGGG
TGATGTTCTCCGTTTTGCGCGTGGTCTGCGCCCCAATGACCCTGAACCGGAAGCCCCGCCGCCACTGGCTGCTGCACTGG
CTACCGGTTCTACCCTGCGTATTATGTATACTTCTAATAGCAATCCCCACCCCCTCGAACGCCGCATTCGTCCGATTGAG
CTGGTTGTCGAGCCTAACGGTATCAGTGTGCGCGCCTTCTGCTACCTGCGTAACGATATTCGCAATTTTCTCCTCTCACG
CATTAGCGCGTATTTGCCCGACACGCAGCCAGAGTGA

Upstream 100 bases:

>100_bases
CCTGGTATCGAGTACGCAATGTTCGTGACCGTGAGGGTTGGGTACAGGCCAGCCTGCTAGGCATTCCCGACGATGTTGCA
GCGCAGGTGCCGGTGACACA

Downstream 100 bases:

>100_bases
CCAGCTCAAACGAACAATAAGATCATTTATCACATGTTTTTTCAGAATCAGTCCAAAGAGGGGGTTGACTCTGATACTCC
AACAGTGCTATAGTAGCGTT

Product: DNA polymerase III subunit epsilon

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 278; Mature: 277

Protein sequence:

>278_residues
MTGIELQQPITDVPLIFFDVETTGLEIQAGHRICEVAMLRWEHGQEVGRINTLINPERELDPQAAQINGLQPAELNNAPL
FTDIAPQVVQLSQNAVRIAHNLPFDESFLNMELCRAGYPPFTGPALDTLELARRLGIRRGSLSLAALATTFGLPAPTHRA
MDDVLTLRALFDHFVNEMISFGIITLGDVLRFARGLRPNDPEPEAPPPLAAALATGSTLRIMYTSNSNPHPLERRIRPIE
LVVEPNGISVRAFCYLRNDIRNFLLSRISAYLPDTQPE

Sequences:

>Translated_278_residues
MTGIELQQPITDVPLIFFDVETTGLEIQAGHRICEVAMLRWEHGQEVGRINTLINPERELDPQAAQINGLQPAELNNAPL
FTDIAPQVVQLSQNAVRIAHNLPFDESFLNMELCRAGYPPFTGPALDTLELARRLGIRRGSLSLAALATTFGLPAPTHRA
MDDVLTLRALFDHFVNEMISFGIITLGDVLRFARGLRPNDPEPEAPPPLAAALATGSTLRIMYTSNSNPHPLERRIRPIE
LVVEPNGISVRAFCYLRNDIRNFLLSRISAYLPDTQPE
>Mature_277_residues
TGIELQQPITDVPLIFFDVETTGLEIQAGHRICEVAMLRWEHGQEVGRINTLINPERELDPQAAQINGLQPAELNNAPLF
TDIAPQVVQLSQNAVRIAHNLPFDESFLNMELCRAGYPPFTGPALDTLELARRLGIRRGSLSLAALATTFGLPAPTHRAM
DDVLTLRALFDHFVNEMISFGIITLGDVLRFARGLRPNDPEPEAPPPLAAALATGSTLRIMYTSNSNPHPLERRIRPIEL
VVEPNGISVRAFCYLRNDIRNFLLSRISAYLPDTQPE

Specific function: DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease [H]

COG id: COG0847

COG function: function code L; DNA polymerase III, epsilon subunit and related 3'-5' exonucleases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006054
- InterPro:   IPR006055
- InterPro:   IPR013520
- InterPro:   IPR012337 [H]

Pfam domain/function: PF00929 Exonuc_X-T [H]

EC number: =2.7.7.7 [H]

Molecular weight: Translated: 30844; Mature: 30713

Theoretical pI: Translated: 4.99; Mature: 4.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTGIELQQPITDVPLIFFDVETTGLEIQAGHRICEVAMLRWEHGQEVGRINTLINPEREL
CCCCCCCCCCCCCCEEEEEECCCCEEEECCHHHHHHHHHHHHCCCHHHHHHHHCCCHHHC
DPQAAQINGLQPAELNNAPLFTDIAPQVVQLSQNAVRIAHNLPFDESFLNMELCRAGYPP
CCCHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHEEHHHCCCCCHHHHHHHHHHCCCCC
FTGPALDTLELARRLGIRRGSLSLAALATTFGLPAPTHRAMDDVLTLRALFDHFVNEMIS
CCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
FGIITLGDVLRFARGLRPNDPEPEAPPPLAAALATGSTLRIMYTSNSNPHPLERRIRPIE
HHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHCCCEEEEEECCCCCCCHHHHCCCEEE
LVVEPNGISVRAFCYLRNDIRNFLLSRISAYLPDTQPE
EEECCCCCEEEEHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
TGIELQQPITDVPLIFFDVETTGLEIQAGHRICEVAMLRWEHGQEVGRINTLINPEREL
CCCCCCCCCCCCCEEEEEECCCCEEEECCHHHHHHHHHHHHCCCHHHHHHHHCCCHHHC
DPQAAQINGLQPAELNNAPLFTDIAPQVVQLSQNAVRIAHNLPFDESFLNMELCRAGYPP
CCCHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHEEHHHCCCCCHHHHHHHHHHCCCCC
FTGPALDTLELARRLGIRRGSLSLAALATTFGLPAPTHRAMDDVLTLRALFDHFVNEMIS
CCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
FGIITLGDVLRFARGLRPNDPEPEAPPPLAAALATGSTLRIMYTSNSNPHPLERRIRPIE
HHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHCCCEEEEEECCCCCCCHHHHCCCEEE
LVVEPNGISVRAFCYLRNDIRNFLLSRISAYLPDTQPE
EEECCCCCEEEEHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9665876 [H]