Click here to switch to the map view.

The map label for this gene is 222526549

Identifier: 222526549

GI number: 222526549

Start: 4131723

End: 4132973

Strand: Reverse

Name: 222526549

Synonym: Chy400_3316

Alternate gene names: NA

Gene position: 4132973-4131723 (Counterclockwise)

Preceding gene: 222526551

Following gene: 222526548

Centisome position: 78.44

GC content: 57.15

Gene sequence:

>1251_bases
ATGCAAACAACGCTCAATCAGATGCCAACACCACTAGCCATCGGGCTTATCATTCTTGGACTTATCGTTATTCTGCTGGT
CGTCATCCTGATTCGTCGCCGTCGTTCTGCTCAGCAATCGGCACCTGAACTGGAACTTCCTCCGGCAACGCCGATTGATT
ACACGGCGGTACCGCTGGAAGAACCACAAAGCTGGCAAGATCGACTGCGTAATCTCTCCCTGGCAGCCAAAATCCTCTTT
GTGCTGATCCCGGTATTGCTGTGTCTGGGAATTGGGATACTGGTATTGAGCTTAAATAACGATCAGACTGCCGGCCCACC
ACCAACACCCACACCTTCACCGGTACCGGTCACCATTACGATAGAAGATGCAGCCATTGTCCGTGCCGATCCGCTGACCA
TCGGGGTGCGAGTGCGTAGTACCGGTCTGCCTGATGACAGTGAGTTGCAAGTTGAACTACGCGCCGACGGACAACCACTG
AGCTGGATCGATCCTGCTCAGACCATTCGTATTCGCCGCGACCGGGGTGATTTGCGCACCGAAAAACTCCCTGATGGCGA
TCCAACACCGCGTGGACGACGCTATACCGTCGTCGTCAGCACACCAGACGGTAGCGTAAGCGCTGAAGCCGAGCTGGAGG
TGCTGGCAAACTTCGAGTCCGCCTTCTATGGGGAAACAGGTGGCGTGGCAGAGGCACCTTCACCTACCGTATCACCAACG
GCCACTCAGCCTCCGGCAGCGCAGACAACCCCAACTCCACCGCCGTCGCCAACGGCAACCCCAACCCCAACGTTGCCTAC
CGGTCAACCGGTCGCCGTCACCAATGGTGGGAATGTGCGCAGTTTGCCGTACACGGGTATTGACAACGTGATCGGCGGGA
TCAACGCCGGTGAACAGGTCCAAATCCTGGCCCGTACTCCCAATGCCCAATGGTATTATGTACGCACTGTTCGCGATGAA
ATAGGTTGGGTCAGCGTAACCCTCATTGCCGTCACCGACCTGATCGCTGCCGAAACACCGGTAGCCAATGTCGTGACGGT
CTTTGTCAGCGGTCCGCTCTACCTGGCTGCCGATCCGGCCAGTGCGCAAATTGATCGGGTTGAGGTCAATGAGGTGGTCG
AGTTGTTTGAGCGCACCGCCGACGGCACCTGGTATCGAGTACGCAATGTTCGTGACCGTGAGGGTTGGGTACAGGCCAGC
CTGCTAGGCATTCCCGACGATGTTGCAGCGCAGGTGCCGGTGACACAATGA

Upstream 100 bases:

>100_bases
GATCTTGTGATAAATTCTACTATTTCTGCTAGTACGAGTTGCAGATACTGCCGGATTCGCATATTATAGGCATTCGAAGC
GATTGTATTCGAGGTTACGC

Downstream 100 bases:

>100_bases
CAGGCATTGAACTACAACAACCCATTACCGACGTGCCGCTCATCTTCTTCGATGTTGAGACGACCGGGCTTGAGATTCAG
GCCGGTCATCGCATCTGCGA

Product: SH3 type 3 domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 416; Mature: 416

Protein sequence:

>416_residues
MQTTLNQMPTPLAIGLIILGLIVILLVVILIRRRRSAQQSAPELELPPATPIDYTAVPLEEPQSWQDRLRNLSLAAKILF
VLIPVLLCLGIGILVLSLNNDQTAGPPPTPTPSPVPVTITIEDAAIVRADPLTIGVRVRSTGLPDDSELQVELRADGQPL
SWIDPAQTIRIRRDRGDLRTEKLPDGDPTPRGRRYTVVVSTPDGSVSAEAELEVLANFESAFYGETGGVAEAPSPTVSPT
ATQPPAAQTTPTPPPSPTATPTPTLPTGQPVAVTNGGNVRSLPYTGIDNVIGGINAGEQVQILARTPNAQWYYVRTVRDE
IGWVSVTLIAVTDLIAAETPVANVVTVFVSGPLYLAADPASAQIDRVEVNEVVELFERTADGTWYRVRNVRDREGWVQAS
LLGIPDDVAAQVPVTQ

Sequences:

>Translated_416_residues
MQTTLNQMPTPLAIGLIILGLIVILLVVILIRRRRSAQQSAPELELPPATPIDYTAVPLEEPQSWQDRLRNLSLAAKILF
VLIPVLLCLGIGILVLSLNNDQTAGPPPTPTPSPVPVTITIEDAAIVRADPLTIGVRVRSTGLPDDSELQVELRADGQPL
SWIDPAQTIRIRRDRGDLRTEKLPDGDPTPRGRRYTVVVSTPDGSVSAEAELEVLANFESAFYGETGGVAEAPSPTVSPT
ATQPPAAQTTPTPPPSPTATPTPTLPTGQPVAVTNGGNVRSLPYTGIDNVIGGINAGEQVQILARTPNAQWYYVRTVRDE
IGWVSVTLIAVTDLIAAETPVANVVTVFVSGPLYLAADPASAQIDRVEVNEVVELFERTADGTWYRVRNVRDREGWVQAS
LLGIPDDVAAQVPVTQ
>Mature_416_residues
MQTTLNQMPTPLAIGLIILGLIVILLVVILIRRRRSAQQSAPELELPPATPIDYTAVPLEEPQSWQDRLRNLSLAAKILF
VLIPVLLCLGIGILVLSLNNDQTAGPPPTPTPSPVPVTITIEDAAIVRADPLTIGVRVRSTGLPDDSELQVELRADGQPL
SWIDPAQTIRIRRDRGDLRTEKLPDGDPTPRGRRYTVVVSTPDGSVSAEAELEVLANFESAFYGETGGVAEAPSPTVSPT
ATQPPAAQTTPTPPPSPTATPTPTLPTGQPVAVTNGGNVRSLPYTGIDNVIGGINAGEQVQILARTPNAQWYYVRTVRDE
IGWVSVTLIAVTDLIAAETPVANVVTVFVSGPLYLAADPASAQIDRVEVNEVVELFERTADGTWYRVRNVRDREGWVQAS
LLGIPDDVAAQVPVTQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 44530; Mature: 44530

Theoretical pI: Translated: 4.31; Mature: 4.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
0.7 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
0.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQTTLNQMPTPLAIGLIILGLIVILLVVILIRRRRSAQQSAPELELPPATPIDYTAVPLE
CCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEECCCC
EPQSWQDRLRNLSLAAKILFVLIPVLLCLGIGILVLSLNNDQTAGPPPTPTPSPVPVTIT
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCCCCCEEEEEE
IEDAAIVRADPLTIGVRVRSTGLPDDSELQVELRADGQPLSWIDPAQTIRIRRDRGDLRT
ECCCEEEEECCEEEEEEEECCCCCCCCCEEEEEECCCCCCCCCCCCCEEEEECCCCCCCC
EKLPDGDPTPRGRRYTVVVSTPDGSVSAEAELEVLANFESAFYGETGGVAEAPSPTVSPT
CCCCCCCCCCCCCEEEEEEECCCCCCCCCCHHHEEHHHHHHHCCCCCCCCCCCCCCCCCC
ATQPPAAQTTPTPPPSPTATPTPTLPTGQPVAVTNGGNVRSLPYTGIDNVIGGINAGEQV
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCEEECCCCCHHHHHCCCCCCCEE
QILARTPNAQWYYVRTVRDEIGWVSVTLIAVTDLIAAETPVANVVTVFVSGPLYLAADPA
EEEEECCCCCEEEEEEECCCCCEEEEHHHHHHHHHHCCCCHHHEEEEEECCCEEEEECCC
SAQIDRVEVNEVVELFERTADGTWYRVRNVRDREGWVQASLLGIPDDVAAQVPVTQ
CCCCCEECHHHHHHHHHHCCCCCEEEECCCCCCCCEEEEEEECCCHHHHCCCCCCC
>Mature Secondary Structure
MQTTLNQMPTPLAIGLIILGLIVILLVVILIRRRRSAQQSAPELELPPATPIDYTAVPLE
CCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEECCCC
EPQSWQDRLRNLSLAAKILFVLIPVLLCLGIGILVLSLNNDQTAGPPPTPTPSPVPVTIT
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCCCCCEEEEEE
IEDAAIVRADPLTIGVRVRSTGLPDDSELQVELRADGQPLSWIDPAQTIRIRRDRGDLRT
ECCCEEEEECCEEEEEEEECCCCCCCCCEEEEEECCCCCCCCCCCCCEEEEECCCCCCCC
EKLPDGDPTPRGRRYTVVVSTPDGSVSAEAELEVLANFESAFYGETGGVAEAPSPTVSPT
CCCCCCCCCCCCCEEEEEEECCCCCCCCCCHHHEEHHHHHHHCCCCCCCCCCCCCCCCCC
ATQPPAAQTTPTPPPSPTATPTPTLPTGQPVAVTNGGNVRSLPYTGIDNVIGGINAGEQV
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCEEECCCCCHHHHHCCCCCCCEE
QILARTPNAQWYYVRTVRDEIGWVSVTLIAVTDLIAAETPVANVVTVFVSGPLYLAADPA
EEEEECCCCCEEEEEEECCCCCEEEEHHHHHHHHHHCCCCHHHEEEEEECCCEEEEECCC
SAQIDRVEVNEVVELFERTADGTWYRVRNVRDREGWVQASLLGIPDDVAAQVPVTQ
CCCCCEECHHHHHHHHHHCCCCCEEEECCCCCCCCEEEEEEECCCHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA