| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is 222526486
Identifier: 222526486
GI number: 222526486
Start: 4055570
End: 4057306
Strand: Reverse
Name: 222526486
Synonym: Chy400_3253
Alternate gene names: NA
Gene position: 4057306-4055570 (Counterclockwise)
Preceding gene: 222526487
Following gene: 222526485
Centisome position: 77.0
GC content: 55.61
Gene sequence:
>1737_bases GTGACTGCTCCCGACCCATTTTCGTTACCGCCTGCTACACCTGAACCACGCCGACGCAATCTATTACCGATCCTGATCGG TGGTGGCCTGGCAGGCATCTTACTGATTGTGATCGGCGGCGCTGCACTGGCATTTACGCTGTTGACGCAACGGGCCAATA ACTTGCCCGAATTATTGCCGGCGGAAACGCAAATATATGCCACGTTCACCCCCAATCTCAGCGATCTCCCCAATATCGAA CGCCTGCGGCAGGCATTTCCTGAAACGTTTGACTATCAGGAGAGTGAGACGACTTCGGATCTGCTGGCGGAACGCTTTGG GGTTACATTCGCCGAAGATATTGCCCCATGGATCGGTGCTGAGATGGCACTGGCCCTGTACGGTCTGCCTATCGAAGAGT TGACTAATCTGTCTGGCCTGGAGCCGGCTGATCCGATGAATCCGTTCTCGACACCACTGGATCGGGAAACGAACATTCTC TTGCTGGCAGCGGTACGCGATCAACGGGCTGCGCAGGCTTTTCTCGACAAGCAACGGGCGTTCCGCGAACAGAAAGGCGA ACGCTTTACGACAAACACTATCAACAACGTGACGATTTACGCCAGCGAAAGCGATACAACACCGTTTGCAGCGTTTGCCC TGGCCCGGAACACGGTCGTTTTCGCCAATAAGGCCGAGAACATTGCTACGTTGGTGCAACAAGAGAATGACAGTACGCTT GCCCGCAATACATCATTTCAGACAGTAATCCAGGCTCTCCCCGGCGACCGCATGGCAACCATTTATATTTCTGGTGATAC TATCGCCCGCCTCACCGATGCGTTGCTTGAGTCGTCCACCGATACGGTACCAACGGCTACCTTAAACGATGCACAGGCTG CGGCCCAGGCTCTGCAAGGAGTAGGGCTAACGATGGCGGTCATTGAGCGGGGTCTGCGCTTCGACGCCGTCTCGGTGTTT GATCAGAATCGGCTGGGGAACGACTTGCGCGAACGGATCGCTCAATTACGGCCTGCCGTTTCGCCAGAACGGGCGGGCGA TGTCGATAGTGCGGCACTTGGTGTGTTCAGTTTTCTCATTCCCGAAGACTGGGGGCAGCAATTGCGTGATCAGCTTGCCG CCTCACCCGAAACGGCAAATACGCTCGACGATCTTGAAGCAAGCCTGAACATCGACTTCGAGCGCGATCTGTTTCGCTGG TTCCACGGCGAGGGTGTGATTACTGTGTTACCGCTTGACAGCAACGACCTGCCGGTTGGCGGGTATTTCGCGCTACGAGT TGCCGACCGGTCTGCCGCTGAACAAGGGATGGAGCGGATAAGTGCTTTTGTTGCCGATTCGTTCGGTCTGGTGTTTACCG ACACATCACTGGGTCGTACTCAGGTACAGGCGATAGAAGAAGGCGATCTCTTTGTCGGCTACGGCTTCAACGGGAATGAT CTGGTGATTGCATTCGGTCGTCAGGCGATGGAGTCGGCATTTGGAGCTGAACAGAAATTGTCAAGCCAGAGCGACTATGC CGACGCGCTGCGGGCATTACCCTCTCCGAACAGCGGTATCCTTCACGTCAACCTCACGGCTGTGCGAGAACTGTACAATC GGGTCGGTACCGATCTGGCCGATCCCGACCTCGAACAACGTCTGGCACCGTTCAAGGCGATCACATCCACCGGTACCGTT GGCCTGGATAATCAGGGCGCTCTTCGCGGAACGTTGTTGTTGAGTATTGGTTCCTGA
Upstream 100 bases:
>100_bases ACATCTTTTTTGAGGTAGTTTCCAGAGATGAAACTCGCTTCGTGGCTCCTGCGTATATTGCAGCAACAGACCAGGCTTAC CCGCAAGTAAGGAGGCAACA
Downstream 100 bases:
>100_bases GCGATCACTATGGAGAAAGACCGGTTCTGAAAACGTCAGTTCGGCACTGCGCTATGTGAAGAAACCACGCATCGGGCCGG CTTATTCCGCGCTGACGGTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 578; Mature: 577
Protein sequence:
>578_residues MTAPDPFSLPPATPEPRRRNLLPILIGGGLAGILLIVIGGAALAFTLLTQRANNLPELLPAETQIYATFTPNLSDLPNIE RLRQAFPETFDYQESETTSDLLAERFGVTFAEDIAPWIGAEMALALYGLPIEELTNLSGLEPADPMNPFSTPLDRETNIL LLAAVRDQRAAQAFLDKQRAFREQKGERFTTNTINNVTIYASESDTTPFAAFALARNTVVFANKAENIATLVQQENDSTL ARNTSFQTVIQALPGDRMATIYISGDTIARLTDALLESSTDTVPTATLNDAQAAAQALQGVGLTMAVIERGLRFDAVSVF DQNRLGNDLRERIAQLRPAVSPERAGDVDSAALGVFSFLIPEDWGQQLRDQLAASPETANTLDDLEASLNIDFERDLFRW FHGEGVITVLPLDSNDLPVGGYFALRVADRSAAEQGMERISAFVADSFGLVFTDTSLGRTQVQAIEEGDLFVGYGFNGND LVIAFGRQAMESAFGAEQKLSSQSDYADALRALPSPNSGILHVNLTAVRELYNRVGTDLADPDLEQRLAPFKAITSTGTV GLDNQGALRGTLLLSIGS
Sequences:
>Translated_578_residues MTAPDPFSLPPATPEPRRRNLLPILIGGGLAGILLIVIGGAALAFTLLTQRANNLPELLPAETQIYATFTPNLSDLPNIE RLRQAFPETFDYQESETTSDLLAERFGVTFAEDIAPWIGAEMALALYGLPIEELTNLSGLEPADPMNPFSTPLDRETNIL LLAAVRDQRAAQAFLDKQRAFREQKGERFTTNTINNVTIYASESDTTPFAAFALARNTVVFANKAENIATLVQQENDSTL ARNTSFQTVIQALPGDRMATIYISGDTIARLTDALLESSTDTVPTATLNDAQAAAQALQGVGLTMAVIERGLRFDAVSVF DQNRLGNDLRERIAQLRPAVSPERAGDVDSAALGVFSFLIPEDWGQQLRDQLAASPETANTLDDLEASLNIDFERDLFRW FHGEGVITVLPLDSNDLPVGGYFALRVADRSAAEQGMERISAFVADSFGLVFTDTSLGRTQVQAIEEGDLFVGYGFNGND LVIAFGRQAMESAFGAEQKLSSQSDYADALRALPSPNSGILHVNLTAVRELYNRVGTDLADPDLEQRLAPFKAITSTGTV GLDNQGALRGTLLLSIGS >Mature_577_residues TAPDPFSLPPATPEPRRRNLLPILIGGGLAGILLIVIGGAALAFTLLTQRANNLPELLPAETQIYATFTPNLSDLPNIER LRQAFPETFDYQESETTSDLLAERFGVTFAEDIAPWIGAEMALALYGLPIEELTNLSGLEPADPMNPFSTPLDRETNILL LAAVRDQRAAQAFLDKQRAFREQKGERFTTNTINNVTIYASESDTTPFAAFALARNTVVFANKAENIATLVQQENDSTLA RNTSFQTVIQALPGDRMATIYISGDTIARLTDALLESSTDTVPTATLNDAQAAAQALQGVGLTMAVIERGLRFDAVSVFD QNRLGNDLRERIAQLRPAVSPERAGDVDSAALGVFSFLIPEDWGQQLRDQLAASPETANTLDDLEASLNIDFERDLFRWF HGEGVITVLPLDSNDLPVGGYFALRVADRSAAEQGMERISAFVADSFGLVFTDTSLGRTQVQAIEEGDLFVGYGFNGNDL VIAFGRQAMESAFGAEQKLSSQSDYADALRALPSPNSGILHVNLTAVRELYNRVGTDLADPDLEQRLAPFKAITSTGTVG LDNQGALRGTLLLSIGS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 62506; Mature: 62375
Theoretical pI: Translated: 4.14; Mature: 4.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAPDPFSLPPATPEPRRRNLLPILIGGGLAGILLIVIGGAALAFTLLTQRANNLPELLP CCCCCCCCCCCCCCCCHHCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCC AETQIYATFTPNLSDLPNIERLRQAFPETFDYQESETTSDLLAERFGVTFAEDIAPWIGA CCEEEEEEECCCCCCCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHH EMALALYGLPIEELTNLSGLEPADPMNPFSTPLDRETNILLLAAVRDQRAAQAFLDKQRA HHHHHHHCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECHHHHHHHHHHHHHHH FREQKGERFTTNTINNVTIYASESDTTPFAAFALARNTVVFANKAENIATLVQQENDSTL HHHHCCCEEECCCCCCEEEEECCCCCCCHHHHHHHCCEEEEECCHHHHHHHHHCCCCCHH ARNTSFQTVIQALPGDRMATIYISGDTIARLTDALLESSTDTVPTATLNDAQAAAQALQG HHCCHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHC VGLTMAVIERGLRFDAVSVFDQNRLGNDLRERIAQLRPAVSPERAGDVDSAALGVFSFLI CCHHHHHHHCCCCCCHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHC PEDWGQQLRDQLAASPETANTLDDLEASLNIDFERDLFRWFHGEGVITVLPLDSNDLPVG CHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCHHHHHHHHHCCCCEEEEEECCCCCCCCC GYFALRVADRSAAEQGMERISAFVADSFGLVFTDTSLGRTQVQAIEEGDLFVGYGFNGND CEEEEEECCHHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHEEECCCEEEEECCCCCC LVIAFGRQAMESAFGAEQKLSSQSDYADALRALPSPNSGILHVNLTAVRELYNRVGTDLA EEEEECHHHHHHHHCHHHHHCCCCHHHHHHHHCCCCCCCEEEEEHHHHHHHHHHHCCCCC DPDLEQRLAPFKAITSTGTVGLDNQGALRGTLLLSIGS CCCHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEEECC >Mature Secondary Structure TAPDPFSLPPATPEPRRRNLLPILIGGGLAGILLIVIGGAALAFTLLTQRANNLPELLP CCCCCCCCCCCCCCCHHCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCC AETQIYATFTPNLSDLPNIERLRQAFPETFDYQESETTSDLLAERFGVTFAEDIAPWIGA CCEEEEEEECCCCCCCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHH EMALALYGLPIEELTNLSGLEPADPMNPFSTPLDRETNILLLAAVRDQRAAQAFLDKQRA HHHHHHHCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECHHHHHHHHHHHHHHH FREQKGERFTTNTINNVTIYASESDTTPFAAFALARNTVVFANKAENIATLVQQENDSTL HHHHCCCEEECCCCCCEEEEECCCCCCCHHHHHHHCCEEEEECCHHHHHHHHHCCCCCHH ARNTSFQTVIQALPGDRMATIYISGDTIARLTDALLESSTDTVPTATLNDAQAAAQALQG HHCCHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHC VGLTMAVIERGLRFDAVSVFDQNRLGNDLRERIAQLRPAVSPERAGDVDSAALGVFSFLI CCHHHHHHHCCCCCCHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHC PEDWGQQLRDQLAASPETANTLDDLEASLNIDFERDLFRWFHGEGVITVLPLDSNDLPVG CHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCHHHHHHHHHCCCCEEEEEECCCCCCCCC GYFALRVADRSAAEQGMERISAFVADSFGLVFTDTSLGRTQVQAIEEGDLFVGYGFNGND CEEEEEECCHHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHEEECCCEEEEECCCCCC LVIAFGRQAMESAFGAEQKLSSQSDYADALRALPSPNSGILHVNLTAVRELYNRVGTDLA EEEEECHHHHHHHHCHHHHHCCCCHHHHHHHHCCCCCCCEEEEEHHHHHHHHHHHCCCCC DPDLEQRLAPFKAITSTGTVGLDNQGALRGTLLLSIGS CCCHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA