| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is hcrA [H]
Identifier: 222526485
GI number: 222526485
Start: 4053091
End: 4055373
Strand: Reverse
Name: hcrA [H]
Synonym: Chy400_3252
Alternate gene names: 222526485
Gene position: 4055373-4053091 (Counterclockwise)
Preceding gene: 222526486
Following gene: 222526482
Centisome position: 76.97
GC content: 62.59
Gene sequence:
>2283_bases ATGACACAACAAGCCCCGCATCGCTACCTTGGCAAAGCGCGTAAATTAGTCGATGGCGTCGAGAAGGTGACCGGTCGTGC CCGTTACGCCGGAGATGTTTCCCTGCCGGGTATGCTGCACGGCAAGCTGGCCCTCAGCCTGTTCGCCCATGCCCGAATTA CCCGGATCGATACTGCGGCGGCGCTGAAGATTCCCGGCGTGGTCGCGGTATTGACTGCCGACGATCTACCCACACGCAAT CGGCAGCCCTCATCACGACAGACGACAACCCTCGCCAGAGAGGTTGTTCGCTACCGTGGTGAACCGGTTGCGCTGGTTCT GGCCACCAGTCTGGCGGCTGCCGAGGATGGTGTGGCTGCCTTGCAGATCGATTATGAACCGTTGCCGGCACCGGTTACTG CGGAAGCCGCCCTCGATCCGGCGGCACCGGTGATTTGGCCGCAAGGCGCGCCGAAGGCCGACACCGATTTAACTGCGGCC CACGCCGCCGTGGCCCGTGGCGAAGAGCAGAGTGACCACGTCGCCTCGAACATCCATGAACAGAAACGCTTCAGTCGGGG TGATGCCCTGGCGGCGCTCGCCACTGCTGAGGTGGTGGTCGCAGGCACCTATCGAACGGCGATAGTCCACCAGGGCTACC TGGAACCGCACGCCGTAGTCGCCGATATCGAACCGATCCGCAAACACATTACCCTGTACACCAGCACGCAGGGGCAGTTT GGGGTTCGCGATGAAGTCGCTCGTTTGCTTGGACTGCGGACAAGTCAGGTAACGGTGGTACCGATGACGGTCGGCGGTGG GTTTGGCGCCAAATACGGCATTCTCGATCCACTGGCTGCCGCTGCTGCGCTGGCCGTTGGGCGTCCGGTACGGATCGTCC TTGACCGCAGTGAAGACTTTCTGACCACCACCCCCTCACCGGCCAGTACCATCACGATCAAACTGGGGGCAACTCGTGAA GGAGTCCTCACGGCAATAGTGGCCGAGATGGTGATCGACAACGGCGTCTACCCCTTCACGCTGGGCGGCATCATGAGCAC GCTACTCGGCGGCTACTACCGCTGCCCCAACGTCCAGATTGATGTGGTTGAAGTCCTCACCCACAAACCCCAGGCCGGCG CATACCGTGCGCCGGGGGCACCGCAAGTTACGTTCGCGCTCGAGTCGAGCATTGACGAGCTGGCTCGCCGTCTGGAGCTT GATCCGCTTGAGCTACGCTTGCGAAACGCAGCGACGACCGGCGACCCGATGGGCAACAACGACCCGTGGCCGTCGATGGG GCTACGGCAGGTGCTGGAAGCCGCGGCCAACCATCCGCTCTGGCGCGAGCGCACACCGGGCAGCGGAGTCGGCCTGGCGA TTGGCGGCTGGCCGTGTGGGATGTCACCCGCCGCAGCCGTTTGTCGGGTTGACACCGATGGGATCGTGCGCGTCCACGTC GGCTCGGTTGACATTTCAGGTGTCAACAGCAGCTTCGTGCTGGTGGCGGCGGAGATTCTGGGTGTACCACCCGAACAGGT CGAGATTGTGGCCGGTGATACCCGCAGCGGGCCGTTTGCCGGGCCGAGTGGCGGCAGTCAGATCACGTACAGTGTTGCCG GTGCGGTAGCTGCGGCGGCCCAGGAAGCCCGGCGGCAGCTTCTGGAGGTTGCTGCTGATATGTTGGAAGCCCGCATTGAC GATCTCGACCTGCGTGATGGCGCTATCCATGTCCGGGGCTTACCTGGACGCACACTGCCAATTGGCGAGGTTGCCCGGCG TGCTCAGGAACAGCAGGGCGGGCCGGGACCTATTGTCGGTGAAGGACGAACAGCACCCGCCGAAAATGCTCCCGGCTTTG TCGCGCATATTGTGCAGGTCACGGTAGACAACGAAACCGGACGAGTGCAACCGTTGCGGTATGTCGCAATCCAGGATGTC GGGTTTCCGCTCAACCCGCTGATGGTGGAAGGCCAGATTCACGGTGGTGCCGTGCAGGGAATTGGTTGGGGGTTGCACGA AGCACTCCGCTACGACGAAAATGGCGAGCTATTGACGGCCAGTCTTATGGATTACACCCTGCCACGTGCGGCAGATGTGC CGTCGATTGAAACTGTTCTGGTCACCAATCCGGCACCCAACGGGCCGTTTGGCGCACGTGGTGTTGGCGAGCCACCGATC ACCGCCGGGGCAGCAGCGCTCGCCAATGCGATTCGCGATGCCACCGGTGCCCGTATCTACGAACTGCCGATGCGCGATGA AGTGGTGTGGCGGGCAATGCAGAAGGGTGTCAACAAGCAATAG
Upstream 100 bases:
>100_bases GGTATGTATGCAGCACAGGCAGCCGCTTGTGCTGCTTCGTTATCCCACACTCACATTATGGTACGATAGACGGGGAGAGG TTCACAGAGGAGTTACAAGC
Downstream 100 bases:
>100_bases TTCCTGAATCTACAAGTGACAAATGATCGGGGTATGGTTGTTCACCATACCCCGATCAATACTTGCGGTAAGACTCATGC AGTGTCAGTAAGCCTACACA
Product: Xanthine dehydrogenase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 760; Mature: 759
Protein sequence:
>760_residues MTQQAPHRYLGKARKLVDGVEKVTGRARYAGDVSLPGMLHGKLALSLFAHARITRIDTAAALKIPGVVAVLTADDLPTRN RQPSSRQTTTLAREVVRYRGEPVALVLATSLAAAEDGVAALQIDYEPLPAPVTAEAALDPAAPVIWPQGAPKADTDLTAA HAAVARGEEQSDHVASNIHEQKRFSRGDALAALATAEVVVAGTYRTAIVHQGYLEPHAVVADIEPIRKHITLYTSTQGQF GVRDEVARLLGLRTSQVTVVPMTVGGGFGAKYGILDPLAAAAALAVGRPVRIVLDRSEDFLTTTPSPASTITIKLGATRE GVLTAIVAEMVIDNGVYPFTLGGIMSTLLGGYYRCPNVQIDVVEVLTHKPQAGAYRAPGAPQVTFALESSIDELARRLEL DPLELRLRNAATTGDPMGNNDPWPSMGLRQVLEAAANHPLWRERTPGSGVGLAIGGWPCGMSPAAAVCRVDTDGIVRVHV GSVDISGVNSSFVLVAAEILGVPPEQVEIVAGDTRSGPFAGPSGGSQITYSVAGAVAAAAQEARRQLLEVAADMLEARID DLDLRDGAIHVRGLPGRTLPIGEVARRAQEQQGGPGPIVGEGRTAPAENAPGFVAHIVQVTVDNETGRVQPLRYVAIQDV GFPLNPLMVEGQIHGGAVQGIGWGLHEALRYDENGELLTASLMDYTLPRAADVPSIETVLVTNPAPNGPFGARGVGEPPI TAGAAALANAIRDATGARIYELPMRDEVVWRAMQKGVNKQ
Sequences:
>Translated_760_residues MTQQAPHRYLGKARKLVDGVEKVTGRARYAGDVSLPGMLHGKLALSLFAHARITRIDTAAALKIPGVVAVLTADDLPTRN RQPSSRQTTTLAREVVRYRGEPVALVLATSLAAAEDGVAALQIDYEPLPAPVTAEAALDPAAPVIWPQGAPKADTDLTAA HAAVARGEEQSDHVASNIHEQKRFSRGDALAALATAEVVVAGTYRTAIVHQGYLEPHAVVADIEPIRKHITLYTSTQGQF GVRDEVARLLGLRTSQVTVVPMTVGGGFGAKYGILDPLAAAAALAVGRPVRIVLDRSEDFLTTTPSPASTITIKLGATRE GVLTAIVAEMVIDNGVYPFTLGGIMSTLLGGYYRCPNVQIDVVEVLTHKPQAGAYRAPGAPQVTFALESSIDELARRLEL DPLELRLRNAATTGDPMGNNDPWPSMGLRQVLEAAANHPLWRERTPGSGVGLAIGGWPCGMSPAAAVCRVDTDGIVRVHV GSVDISGVNSSFVLVAAEILGVPPEQVEIVAGDTRSGPFAGPSGGSQITYSVAGAVAAAAQEARRQLLEVAADMLEARID DLDLRDGAIHVRGLPGRTLPIGEVARRAQEQQGGPGPIVGEGRTAPAENAPGFVAHIVQVTVDNETGRVQPLRYVAIQDV GFPLNPLMVEGQIHGGAVQGIGWGLHEALRYDENGELLTASLMDYTLPRAADVPSIETVLVTNPAPNGPFGARGVGEPPI TAGAAALANAIRDATGARIYELPMRDEVVWRAMQKGVNKQ >Mature_759_residues TQQAPHRYLGKARKLVDGVEKVTGRARYAGDVSLPGMLHGKLALSLFAHARITRIDTAAALKIPGVVAVLTADDLPTRNR QPSSRQTTTLAREVVRYRGEPVALVLATSLAAAEDGVAALQIDYEPLPAPVTAEAALDPAAPVIWPQGAPKADTDLTAAH AAVARGEEQSDHVASNIHEQKRFSRGDALAALATAEVVVAGTYRTAIVHQGYLEPHAVVADIEPIRKHITLYTSTQGQFG VRDEVARLLGLRTSQVTVVPMTVGGGFGAKYGILDPLAAAAALAVGRPVRIVLDRSEDFLTTTPSPASTITIKLGATREG VLTAIVAEMVIDNGVYPFTLGGIMSTLLGGYYRCPNVQIDVVEVLTHKPQAGAYRAPGAPQVTFALESSIDELARRLELD PLELRLRNAATTGDPMGNNDPWPSMGLRQVLEAAANHPLWRERTPGSGVGLAIGGWPCGMSPAAAVCRVDTDGIVRVHVG SVDISGVNSSFVLVAAEILGVPPEQVEIVAGDTRSGPFAGPSGGSQITYSVAGAVAAAAQEARRQLLEVAADMLEARIDD LDLRDGAIHVRGLPGRTLPIGEVARRAQEQQGGPGPIVGEGRTAPAENAPGFVAHIVQVTVDNETGRVQPLRYVAIQDVG FPLNPLMVEGQIHGGAVQGIGWGLHEALRYDENGELLTASLMDYTLPRAADVPSIETVLVTNPAPNGPFGARGVGEPPIT AGAAALANAIRDATGARIYELPMRDEVVWRAMQKGVNKQ
Specific function: Catalyzes reductive dehydroxylation of 4-hydroxybenzoyl- CoA. Reaction is not reversible [H]
COG id: COG1529
COG function: function code C; Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: To xanthine oxidases [H]
Homologues:
Organism=Homo sapiens, GI91823271, Length=770, Percent_Identity=25.7142857142857, Blast_Score=179, Evalue=1e-44, Organism=Homo sapiens, GI71773480, Length=778, Percent_Identity=25.3213367609255, Blast_Score=159, Evalue=6e-39, Organism=Escherichia coli, GI1789230, Length=768, Percent_Identity=32.1614583333333, Blast_Score=308, Evalue=9e-85, Organism=Escherichia coli, GI1789246, Length=796, Percent_Identity=29.6482412060301, Blast_Score=281, Evalue=1e-76, Organism=Escherichia coli, GI1786478, Length=769, Percent_Identity=28.3485045513654, Blast_Score=191, Evalue=2e-49, Organism=Caenorhabditis elegans, GI17540638, Length=778, Percent_Identity=25.5784061696658, Blast_Score=167, Evalue=2e-41, Organism=Caenorhabditis elegans, GI17539860, Length=752, Percent_Identity=22.8723404255319, Blast_Score=109, Evalue=6e-24, Organism=Caenorhabditis elegans, GI32566215, Length=533, Percent_Identity=23.827392120075, Blast_Score=96, Evalue=6e-20, Organism=Drosophila melanogaster, GI17737937, Length=774, Percent_Identity=27.2609819121447, Blast_Score=175, Evalue=1e-43, Organism=Drosophila melanogaster, GI24647193, Length=756, Percent_Identity=26.1904761904762, Blast_Score=156, Evalue=7e-38, Organism=Drosophila melanogaster, GI24647195, Length=742, Percent_Identity=24.1239892183288, Blast_Score=126, Evalue=6e-29, Organism=Drosophila melanogaster, GI24647197, Length=750, Percent_Identity=24.2666666666667, Blast_Score=125, Evalue=1e-28,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017607 - InterPro: IPR000674 - InterPro: IPR008274 [H]
Pfam domain/function: PF01315 Ald_Xan_dh_C; PF02738 Ald_Xan_dh_C2 [H]
EC number: =1.3.99.20 [H]
Molecular weight: Translated: 79890; Mature: 79759
Theoretical pI: Translated: 5.88; Mature: 5.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQQAPHRYLGKARKLVDGVEKVTGRARYAGDVSLPGMLHGKLALSLFAHARITRIDTAA CCCCCCHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCHHHHHHHHHHHHHHHHEEECCHH ALKIPGVVAVLTADDLPTRNRQPSSRQTTTLAREVVRYRGEPVALVLATSLAAAEDGVAA EEECCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEHHHHHCCCCEEE LQIDYEPLPAPVTAEAALDPAAPVIWPQGAPKADTDLTAAHAAVARGEEQSDHVASNIHE EEEECCCCCCCCCHHHCCCCCCCEECCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHH QKRFSRGDALAALATAEVVVAGTYRTAIVHQGYLEPHAVVADIEPIRKHITLYTSTQGQF HHHHCCCCHHHHHHHEEEEEECCHHEEEEECCCCCCCCEEECHHHHHCEEEEEECCCCCC GVRDEVARLLGLRTSQVTVVPMTVGGGFGAKYGILDPLAAAAALAVGRPVRIVLDRSEDF CCHHHHHHHHCCCCCCEEEEEEEECCCCCCCCCCHHHHHHHHHHHCCCCEEEEEECCCCC LTTTPSPASTITIKLGATREGVLTAIVAEMVIDNGVYPFTLGGIMSTLLGGYYRCPNVQI EEECCCCCCEEEEEECCCCHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHCCEEECCCCEE DVVEVLTHKPQAGAYRAPGAPQVTFALESSIDELARRLELDPLELRLRNAATTGDPMGNN EHHHHHHCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHCCCCHHHHHEECCCCCCCCCCCC DPWPSMGLRQVLEAAANHPLWRERTPGSGVGLAIGGWPCGMSPAAAVCRVDTDGIVRVHV CCCCCHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCCCCCHHHEEEEECCCCEEEEEE GSVDISGVNSSFVLVAAEILGVPPEQVEIVAGDTRSGPFAGPSGGSQITYSVAGAVAAAA CCEEECCCCCCHHEEEHHHHCCCHHHEEEEECCCCCCCCCCCCCCCEEEEHHHHHHHHHH QEARRQLLEVAADMLEARIDDLDLRDGAIHVRGLPGRTLPIGEVARRAQEQQGGPGPIVG HHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHCCCCCCCCC EGRTAPAENAPGFVAHIVQVTVDNETGRVQPLRYVAIQDVGFPLNPLMVEGQIHGGAVQG CCCCCCCCCCCCCEEEEEEEEEECCCCCCCCEEEEEEECCCCCCCCEEEEEEECCCEEEC IGWGLHEALRYDENGELLTASLMDYTLPRAADVPSIETVLVTNPAPNGPFGARGVGEPPI CCHHHHHHHCCCCCCCEEEEHHHHHCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCC TAGAAALANAIRDATGARIYELPMRDEVVWRAMQKGVNKQ HHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHCCCCC >Mature Secondary Structure TQQAPHRYLGKARKLVDGVEKVTGRARYAGDVSLPGMLHGKLALSLFAHARITRIDTAA CCCCCHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCHHHHHHHHHHHHHHHHEEECCHH ALKIPGVVAVLTADDLPTRNRQPSSRQTTTLAREVVRYRGEPVALVLATSLAAAEDGVAA EEECCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEHHHHHCCCCEEE LQIDYEPLPAPVTAEAALDPAAPVIWPQGAPKADTDLTAAHAAVARGEEQSDHVASNIHE EEEECCCCCCCCCHHHCCCCCCCEECCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHH QKRFSRGDALAALATAEVVVAGTYRTAIVHQGYLEPHAVVADIEPIRKHITLYTSTQGQF HHHHCCCCHHHHHHHEEEEEECCHHEEEEECCCCCCCCEEECHHHHHCEEEEEECCCCCC GVRDEVARLLGLRTSQVTVVPMTVGGGFGAKYGILDPLAAAAALAVGRPVRIVLDRSEDF CCHHHHHHHHCCCCCCEEEEEEEECCCCCCCCCCHHHHHHHHHHHCCCCEEEEEECCCCC LTTTPSPASTITIKLGATREGVLTAIVAEMVIDNGVYPFTLGGIMSTLLGGYYRCPNVQI EEECCCCCCEEEEEECCCCHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHCCEEECCCCEE DVVEVLTHKPQAGAYRAPGAPQVTFALESSIDELARRLELDPLELRLRNAATTGDPMGNN EHHHHHHCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHCCCCHHHHHEECCCCCCCCCCCC DPWPSMGLRQVLEAAANHPLWRERTPGSGVGLAIGGWPCGMSPAAAVCRVDTDGIVRVHV CCCCCHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCCCCCHHHEEEEECCCCEEEEEE GSVDISGVNSSFVLVAAEILGVPPEQVEIVAGDTRSGPFAGPSGGSQITYSVAGAVAAAA CCEEECCCCCCHHEEEHHHHCCCHHHEEEEECCCCCCCCCCCCCCCEEEEHHHHHHHHHH QEARRQLLEVAADMLEARIDDLDLRDGAIHVRGLPGRTLPIGEVARRAQEQQGGPGPIVG HHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHCCCCCCCCC EGRTAPAENAPGFVAHIVQVTVDNETGRVQPLRYVAIQDVGFPLNPLMVEGQIHGGAVQG CCCCCCCCCCCCCEEEEEEEEEECCCCCCCCEEEEEEECCCCCCCCEEEEEEECCCEEEC IGWGLHEALRYDENGELLTASLMDYTLPRAADVPSIETVLVTNPAPNGPFGARGVGEPPI CCHHHHHHHCCCCCCCEEEEHHHHHCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCC TAGAAALANAIRDATGARIYELPMRDEVVWRAMQKGVNKQ HHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9490068 [H]