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The map label for this gene is ycjN [C]

Identifier: 222526134

GI number: 222526134

Start: 3574899

End: 3576209

Strand: Direct

Name: ycjN [C]

Synonym: Chy400_2891

Alternate gene names: 222526134

Gene position: 3574899-3576209 (Clockwise)

Preceding gene: 222526130

Following gene: 222526135

Centisome position: 67.85

GC content: 59.19

Gene sequence:

>1311_bases
ATGCTACGAAAACACACCCTGTCGTGGATTGCGCTGGTGGCCTTGTTGGCCACAGTGCTGGCTGCGTGTGGCGGCAGCCA
GCAGCCGACTACCGGTACCGGTGGCGGAACAGGAAGTGGTGAACAGCAGTCGGTGACGATTCGCTGGCGTACACGTCCCG
GTGATGCTGCCGAGCAGCGCGTCTATGAGGAGTTGAATGCGCTGGTGAACGAGAAGCTGAAAGACAAGGGCATTACTGCG
GTCTACGATCCAGCGCCTAACCAGGGCTATTTCGAGAAGCTAAAGACTGAGCTGGCTGCCGGGAACGCACCTGACATCTT
CTGGATCGGTGGCGTTGAGCTGGCAGATTTCGTGAATACCGGCCAGATTCTCGATCTGAAGCCGCTGATCGATGCCGACA
GCAGCTTCCAGTTGAGCAATTTCTACCCGAACGTGATCGAGCAATTGACACGCGACGGTAAGATTTATGGCCTGCCGCGT
GACATCTCGACGATGGTTGTTTACTACAACGAGGACCTCTTCAAGGCTGCCGGCCTCAAGACGCCGAAGGAGCTGGCTGC
CGAGGGGAACTGGAACTGGGAGACCATGCTGGATGCAGCACGGAAACTGACCGATCCGGCCAATCAGCAGTACGGCCTTG
GCTTTGGTAACTGGTGGGGGCCGGCATGGGGGTACTTCGTCTACGCTGCCGGTGGTAGCCCCTTCACGCCTGATCGCCGT
GGCTGTGCTTTGAATACCCCAGAGTCGATTGAGGGCGCGAAGATGGTGCGTCTGCTCTACGACGAGAAGCTGTTGCCGGC
CGGTGATGCCGACGGCGAAGCGCTCTTCAATGCCGGTAAGGTCGCGATGTACTTCAACGGTCGCTGGTTTACCCCCGGTG
TGCGCACGAATGCACAGTTCAACTGGGATGTGGCAGTGATGCCGGAGGGTAAGGTGAAGAGCACCTGGCTCTTCTGGGGG
CCGTACCTGGTGCACGCGAAGACGGCCAATCCGCAGGCCGCCTGGGAAGTGCTGAAGGTGCTCACCAGCGCCGAGGCAAC
GGCGAAGGTGGCTGCTTTGGGTACCAATATCCCGCCCCGCAGCGATCAGGCCGCAGTTGAGGCTTTCCTGGCCTCGACCC
CACCCGCTAATAACCAGGCCTTCCTCGATGGCATCTCCTATGCTGCGCTCGAAGCACCGGTCTGGGATGGCAACTGGGCT
GATTTCAGTGGCACTGTCCAGAGCCTCTGGGATCAGATGATTGCTGGTCAGATTACCCCAGAGCAGTTTGGTCAGCAGGC
CTGTGAACAGACGGCCAGCACATTTAAGTAG

Upstream 100 bases:

>100_bases
ATGCACGTTTTGATGGCACGCCACGTCTGTTGCGGCAGTCGAGTGACGGAGACGGTTGTGGTAGATGGTTGGGGGTTATC
TTGAGAAAGGAACAGCAACG

Downstream 100 bases:

>100_bases
ATCATGACACACGGAGCGAACGGTGGGCGTGCACCGTTCGCTCTTGTTGGTTTATAATGCTTCCAGGTCATTAATTGCTC
CTACGCATTTGCGTTTCAGA

Product: family 1 extracellular solute-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 436; Mature: 436

Protein sequence:

>436_residues
MLRKHTLSWIALVALLATVLAACGGSQQPTTGTGGGTGSGEQQSVTIRWRTRPGDAAEQRVYEELNALVNEKLKDKGITA
VYDPAPNQGYFEKLKTELAAGNAPDIFWIGGVELADFVNTGQILDLKPLIDADSSFQLSNFYPNVIEQLTRDGKIYGLPR
DISTMVVYYNEDLFKAAGLKTPKELAAEGNWNWETMLDAARKLTDPANQQYGLGFGNWWGPAWGYFVYAAGGSPFTPDRR
GCALNTPESIEGAKMVRLLYDEKLLPAGDADGEALFNAGKVAMYFNGRWFTPGVRTNAQFNWDVAVMPEGKVKSTWLFWG
PYLVHAKTANPQAAWEVLKVLTSAEATAKVAALGTNIPPRSDQAAVEAFLASTPPANNQAFLDGISYAALEAPVWDGNWA
DFSGTVQSLWDQMIAGQITPEQFGQQACEQTASTFK

Sequences:

>Translated_436_residues
MLRKHTLSWIALVALLATVLAACGGSQQPTTGTGGGTGSGEQQSVTIRWRTRPGDAAEQRVYEELNALVNEKLKDKGITA
VYDPAPNQGYFEKLKTELAAGNAPDIFWIGGVELADFVNTGQILDLKPLIDADSSFQLSNFYPNVIEQLTRDGKIYGLPR
DISTMVVYYNEDLFKAAGLKTPKELAAEGNWNWETMLDAARKLTDPANQQYGLGFGNWWGPAWGYFVYAAGGSPFTPDRR
GCALNTPESIEGAKMVRLLYDEKLLPAGDADGEALFNAGKVAMYFNGRWFTPGVRTNAQFNWDVAVMPEGKVKSTWLFWG
PYLVHAKTANPQAAWEVLKVLTSAEATAKVAALGTNIPPRSDQAAVEAFLASTPPANNQAFLDGISYAALEAPVWDGNWA
DFSGTVQSLWDQMIAGQITPEQFGQQACEQTASTFK
>Mature_436_residues
MLRKHTLSWIALVALLATVLAACGGSQQPTTGTGGGTGSGEQQSVTIRWRTRPGDAAEQRVYEELNALVNEKLKDKGITA
VYDPAPNQGYFEKLKTELAAGNAPDIFWIGGVELADFVNTGQILDLKPLIDADSSFQLSNFYPNVIEQLTRDGKIYGLPR
DISTMVVYYNEDLFKAAGLKTPKELAAEGNWNWETMLDAARKLTDPANQQYGLGFGNWWGPAWGYFVYAAGGSPFTPDRR
GCALNTPESIEGAKMVRLLYDEKLLPAGDADGEALFNAGKVAMYFNGRWFTPGVRTNAQFNWDVAVMPEGKVKSTWLFWG
PYLVHAKTANPQAAWEVLKVLTSAEATAKVAALGTNIPPRSDQAAVEAFLASTPPANNQAFLDGISYAALEAPVWDGNWA
DFSGTVQSLWDQMIAGQITPEQFGQQACEQTASTFK

Specific function: Probably part of an ABC transporter complex [H]

COG id: COG1653

COG function: function code G; ABC-type sugar transport system, periplasmic component

Gene ontology:

Cell location: Periplasm (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 1 family [H]

Homologues:

Organism=Escherichia coli, GI1787569, Length=267, Percent_Identity=23.5955056179775, Blast_Score=62, Evalue=5e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006059
- InterPro:   IPR006061 [H]

Pfam domain/function: PF01547 SBP_bac_1 [H]

EC number: NA

Molecular weight: Translated: 47471; Mature: 47471

Theoretical pI: Translated: 4.58; Mature: 4.58

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS00227 TUBULIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLRKHTLSWIALVALLATVLAACGGSQQPTTGTGGGTGSGEQQSVTIRWRTRPGDAAEQR
CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCHHHHH
VYEELNALVNEKLKDKGITAVYDPAPNQGYFEKLKTELAAGNAPDIFWIGGVELADFVNT
HHHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHCCCCCCEEEECCCHHHHHCCC
GQILDLKPLIDADSSFQLSNFYPNVIEQLTRDGKIYGLPRDISTMVVYYNEDLFKAAGLK
CCEEEECCCCCCCCCEEHHCCCHHHHHHHHCCCEEEECCCCCEEEEEEECCHHHHHCCCC
TPKELAAEGNWNWETMLDAARKLTDPANQQYGLGFGNWWGPAWGYFVYAAGGSPFTPDRR
CHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCC
GCALNTPESIEGAKMVRLLYDEKLLPAGDADGEALFNAGKVAMYFNGRWFTPGVRTNAQF
CCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHCCCCEEEEECCEEECCCCCCCCEE
NWDVAVMPEGKVKSTWLFWGPYLVHAKTANPQAAWEVLKVLTSAEATAKVAALGTNIPPR
CEEEEECCCCCCCEEEEEECCEEEEEECCCHHHHHHHHHHHHCCHHHHHHHHHCCCCCCC
SDQAAVEAFLASTPPANNQAFLDGISYAALEAPVWDGNWADFSGTVQSLWDQMIAGQITP
CHHHHHHHHHHCCCCCCCCHHHHCCHHHHEECCCCCCCCCCCCCHHHHHHHHHHCCCCCH
EQFGQQACEQTASTFK
HHHHHHHHHHHHHHCC
>Mature Secondary Structure
MLRKHTLSWIALVALLATVLAACGGSQQPTTGTGGGTGSGEQQSVTIRWRTRPGDAAEQR
CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCHHHHH
VYEELNALVNEKLKDKGITAVYDPAPNQGYFEKLKTELAAGNAPDIFWIGGVELADFVNT
HHHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHCCCCCCEEEECCCHHHHHCCC
GQILDLKPLIDADSSFQLSNFYPNVIEQLTRDGKIYGLPRDISTMVVYYNEDLFKAAGLK
CCEEEECCCCCCCCCEEHHCCCHHHHHHHHCCCEEEECCCCCEEEEEEECCHHHHHCCCC
TPKELAAEGNWNWETMLDAARKLTDPANQQYGLGFGNWWGPAWGYFVYAAGGSPFTPDRR
CHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCC
GCALNTPESIEGAKMVRLLYDEKLLPAGDADGEALFNAGKVAMYFNGRWFTPGVRTNAQF
CCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHCCCCEEEEECCEEECCCCCCCCEE
NWDVAVMPEGKVKSTWLFWGPYLVHAKTANPQAAWEVLKVLTSAEATAKVAALGTNIPPR
CEEEEECCCCCCCEEEEEECCEEEEEECCCHHHHHHHHHHHHCCHHHHHHHHHCCCCCCC
SDQAAVEAFLASTPPANNQAFLDGISYAALEAPVWDGNWADFSGTVQSLWDQMIAGQITP
CHHHHHHHHHHCCCCCCCCHHHHCCHHHHEECCCCCCCCCCCCCHHHHHHHHHHCCCCCH
EQFGQQACEQTASTFK
HHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA