| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is 222526130
Identifier: 222526130
GI number: 222526130
Start: 3571931
End: 3572692
Strand: Direct
Name: 222526130
Synonym: Chy400_2887
Alternate gene names: NA
Gene position: 3571931-3572692 (Clockwise)
Preceding gene: 222526129
Following gene: 222526134
Centisome position: 67.79
GC content: 59.06
Gene sequence:
>762_bases ATGGCTCGTCCACTGATCTTGGTGGTTGTGATAATGCTTGTGGCGTGTACGGCTTCAGCGCCGGTAGCCGACATGCCGTC GCCAACAGCCGTGGTTCCAACCACAACACCGTCGACGTCACCCACATCCACGACGGCGCCAACGGTTGCTGCGCCGACCG CAGCACTGCCAACCGTCACCGCAGTACCGGCGACCGCAGTGCCGGTGGTAACGTACCGCGGTGCGCTGGTCGGACGCGAT GCAAATGGTGCGTATACGCTGGGTGATCCGGCAGCTCCGCTCACCCTGACCGACTATTCCGATTTTCTTTGAACGGTATG TCGCCGTCACGTGTTGACGGTTGAACCGGCATTGATCGAACAGTACGTTGTGACCGGGCGTGTCCTGTATGTCTTCCGTC CGGTATTGAACCATGGCGCGGCTTCCCTGATCACGACTGCGGCTGCCTTCTGTGCCGGTGAGCAAGACGCTTTCTGGCCG ATGCATGAATTGCTCTTCGAGCGACAGGGTGAAGTGGCGGCGACCCGTGATAGTGACCTACCGGCGCTTATGCGGTCGTA TGCCGCTGACTTAGGGCTTGCTATTGAGCCATTTGATGCCTGTATGAATGACGGTGCAGCGCAACGACTGGCTGAGACGC TTGATGCCGAACAACGTCAGCGTGGGATTCGCGTGCAGCCGGTTTTCGAGATCGGAGATATTCGCCTGGTAGGCTTGCAG ACACTCGAACGATTTGCCAGCCTGATCGAGCGACAACCCTGA
Upstream 100 bases:
>100_bases GATGCAGTCGGAAGTAACATTTCCTTTGCTCCCTGGCTGACAAGCCGCCCTGGTTGTGTGCCGGCACCTTAATTGAAGGG AGACTCTGTTGATTGCACGA
Downstream 100 bases:
>100_bases CCTGGCAGGCGCTACATCCGGCGTAAGTACGGCGCCTGCCATTCAACGCTTAACACCAGCAGCCAGCCGATCAATGCACT ACCGGCAACTACCAGCGGAA
Product: Protein-disulfide isomerase-like protein
Products: NA
Alternate protein names: Protein-Disulfide Isomerase-Like Protein; Protein-Disulfide Isomerase; Dsba Oxidoreductase; Lipoprotein
Number of amino acids: Translated: 253; Mature: 252
Protein sequence:
>253_residues MARPLILVVVIMLVACTASAPVADMPSPTAVVPTTTPSTSPTSTTAPTVAAPTAALPTVTAVPATAVPVVTYRGALVGRD ANGAYTLGDPAAPLTLTDYSDFLUTVCRRHVLTVEPALIEQYVVTGRVLYVFRPVLNHGAASLITTAAAFCAGEQDAFWP MHELLFERQGEVAATRDSDLPALMRSYAADLGLAIEPFDACMNDGAAQRLAETLDAEQRQRGIRVQPVFEIGDIRLVGLQ TLERFASLIERQP
Sequences:
>Translated_253_residues MARPLILVVVIMLVACTASAPVADMPSPTAVVPTTTPSTSPTSTTAPTVAAPTAALPTVTAVPATAVPVVTYRGALVGRD ANGAYTLGDPAAPLTLTDYSDFL*TVCRRHVLTVEPALIEQYVVTGRVLYVFRPVLNHGAASLITTAAAFCAGEQDAFWP MHELLFERQGEVAATRDSDLPALMRSYAADLGLAIEPFDACMNDGAAQRLAETLDAEQRQRGIRVQPVFEIGDIRLVGLQ TLERFASLIERQP >Mature_252_residues ARPLILVVVIMLVACTASAPVADMPSPTAVVPTTTPSTSPTSTTAPTVAAPTAALPTVTAVPATAVPVVTYRGALVGRDA NGAYTLGDPAAPLTLTDYSDFL*TVCRRHVLTVEPALIEQYVVTGRVLYVFRPVLNHGAASLITTAAAFCAGEQDAFWPM HELLFERQGEVAATRDSDLPALMRSYAADLGLAIEPFDACMNDGAAQRLAETLDAEQRQRGIRVQPVFEIGDIRLVGLQT LERFASLIERQP
Specific function: Unknown
COG id: COG1651
COG function: function code O; Protein-disulfide isomerase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26741; Mature: 26610
Theoretical pI: Translated: 4.61; Mature: 4.61
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARPLILVVVIMLVACTASAPVADMPSPTAVVPTTTPSTSPTSTTAPTVAAPTAALPTVT CCCHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCHH AVPATAVPVVTYRGALVGRDANGAYTLGDPAAPLTLTDYSDFLTVCRRHVLTVEPALIEQ CCCCCHHHHHEECCEEEECCCCCCEECCCCCCCEEECCHHHHHHHHHHHHHCCCHHHHHH YVVTGRVLYVFRPVLNHGAASLITTAAAFCAGEQDAFWPMHELLFERQGEVAATRDSDLP HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCEEECCCCCCH ALMRSYAADLGLAIEPFDACMNDGAAQRLAETLDAEQRQRGIRVQPVFEIGDIRLVGLQT HHHHHHHHHCCCEECHHHHHHCCHHHHHHHHHHCHHHHHCCCEEEEEEEECCEEEEHHHH LERFASLIERQP HHHHHHHHHCCC >Mature Secondary Structure ARPLILVVVIMLVACTASAPVADMPSPTAVVPTTTPSTSPTSTTAPTVAAPTAALPTVT CCHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCHH AVPATAVPVVTYRGALVGRDANGAYTLGDPAAPLTLTDYSDFLTVCRRHVLTVEPALIEQ CCCCCHHHHHEECCEEEECCCCCCEECCCCCCCEEECCHHHHHHHHHHHHHCCCHHHHHH YVVTGRVLYVFRPVLNHGAASLITTAAAFCAGEQDAFWPMHELLFERQGEVAATRDSDLP HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCEEECCCCCCH ALMRSYAADLGLAIEPFDACMNDGAAQRLAETLDAEQRQRGIRVQPVFEIGDIRLVGLQT HHHHHHHHHCCCEECHHHHHHCCHHHHHHHHHHCHHHHHCCCEEEEEEEECCEEEEHHHH LERFASLIERQP HHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA