| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is yesP [H]
Identifier: 222526135
GI number: 222526135
Start: 3576329
End: 3577270
Strand: Direct
Name: yesP [H]
Synonym: Chy400_2892
Alternate gene names: 222526135
Gene position: 3576329-3577270 (Clockwise)
Preceding gene: 222526134
Following gene: 222526136
Centisome position: 67.88
GC content: 53.5
Gene sequence:
>942_bases ATGGCCAAACAGGCGCCGGCAGCGTTGCCTGCCGCTTCCTCACGCCGATTCAATGGTCGGCGTGTTCGGCTGTGGCTTGA CGCTTTCGGTATGTTGCTGCCGACGATTTTGGGTGTGCTGATCTTTTTCCTGGTGCCACTCGGTATCTCGTTCTACCTGA GCTTTACCGATGCGCGTCTATTTGGTGACCCAAATATCATTGGTTTCAGCAATTACCAGCGTGCGCTGTCTGATCCAACC TTCTATCGGGCAATGTGGAATACCGCAGCCTTTTCGATGGTGACGCTGGTTGTCTCGACCGTCCCGGCATTGTTGCTGGC AGTGATCCTGAATGAACGCATCGCCGGACGTACCTTTTTTCGGGCAGTGTTTTTTATTCCGGTCGTGGCTTCGGTCGTTG GTGTGACCCTGCTCTGGCGATACCTGCTCAATATTGATTTTGGGTTTGTCAATTACGCTCTGCGGCTCTTCGGTTTGCAA CCAATCCCCTGGTTGACCAGCCCGGAATGGGGGTTGATCAGTGTGATTCTGGTCTTTTCGTGGAAGACCATCGGCTACAA CATGGTGATCTTTCTGGCCGGTTTGCAAGGGGTACCGCCCCAACTCTACGAGGCCGCCAGTCTCGATGGCGCCAGTCGCT GGCAGCAGTTTCTTTTCATTACGGTGCCAATGCTGTCGCCGACAACTTTTTTTGTACTGGTGACGACTCTGATCAATTGT CTGCAAGTGTTTGATGTGCCGGTTGCTCTGGGTTTGACCCGTTCCAATACGGTTGGCCCAGCCGACTCGATGCTGACGGT GGTACCGTTGCTCTGGCGTGAGGCGTTTATTGGTGGGCGGATGGGCTATGCTTCTGCGCTGGCCTGGTTGTTGTTCGTTA TCATTTTGCTGTTGACTCTGATCCAGTTTCGGATTTCACGGCGCTGGGTTCATTACGAATAA
Upstream 100 bases:
>100_bases ACGGTGGGCGTGCACCGTTCGCTCTTGTTGGTTTATAATGCTTCCAGGTCATTAATTGCTCCTACGCATTTGCGTTTCAG ATATTCCCCGGAGGTGATAC
Downstream 100 bases:
>100_bases GCGAGGCCGGACATGGCAAGTGCAATCTTACGCCGACCATGGGAGCGATTGCTGGCGTATCTGGTGCTGAGCGTCACAGG CTTCATCATGGTCTTTCCGT
Product: binding-protein-dependent transport systems inner membrane component
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 313; Mature: 312
Protein sequence:
>313_residues MAKQAPAALPAASSRRFNGRRVRLWLDAFGMLLPTILGVLIFFLVPLGISFYLSFTDARLFGDPNIIGFSNYQRALSDPT FYRAMWNTAAFSMVTLVVSTVPALLLAVILNERIAGRTFFRAVFFIPVVASVVGVTLLWRYLLNIDFGFVNYALRLFGLQ PIPWLTSPEWGLISVILVFSWKTIGYNMVIFLAGLQGVPPQLYEAASLDGASRWQQFLFITVPMLSPTTFFVLVTTLINC LQVFDVPVALGLTRSNTVGPADSMLTVVPLLWREAFIGGRMGYASALAWLLFVIILLLTLIQFRISRRWVHYE
Sequences:
>Translated_313_residues MAKQAPAALPAASSRRFNGRRVRLWLDAFGMLLPTILGVLIFFLVPLGISFYLSFTDARLFGDPNIIGFSNYQRALSDPT FYRAMWNTAAFSMVTLVVSTVPALLLAVILNERIAGRTFFRAVFFIPVVASVVGVTLLWRYLLNIDFGFVNYALRLFGLQ PIPWLTSPEWGLISVILVFSWKTIGYNMVIFLAGLQGVPPQLYEAASLDGASRWQQFLFITVPMLSPTTFFVLVTTLINC LQVFDVPVALGLTRSNTVGPADSMLTVVPLLWREAFIGGRMGYASALAWLLFVIILLLTLIQFRISRRWVHYE >Mature_312_residues AKQAPAALPAASSRRFNGRRVRLWLDAFGMLLPTILGVLIFFLVPLGISFYLSFTDARLFGDPNIIGFSNYQRALSDPTF YRAMWNTAAFSMVTLVVSTVPALLLAVILNERIAGRTFFRAVFFIPVVASVVGVTLLWRYLLNIDFGFVNYALRLFGLQP IPWLTSPEWGLISVILVFSWKTIGYNMVIFLAGLQGVPPQLYEAASLDGASRWQQFLFITVPMLSPTTFFVLVTTLINCL QVFDVPVALGLTRSNTVGPADSMLTVVPLLWREAFIGGRMGYASALAWLLFVIILLLTLIQFRISRRWVHYE
Specific function: Part of a binding-protein-dependent transport system. Probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG1175
COG function: function code G; ABC-type sugar transport systems, permease components
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1789861, Length=287, Percent_Identity=27.8745644599303, Blast_Score=120, Evalue=1e-28, Organism=Escherichia coli, GI1787570, Length=251, Percent_Identity=31.4741035856574, Blast_Score=110, Evalue=8e-26, Organism=Escherichia coli, GI1790465, Length=316, Percent_Identity=27.5316455696203, Blast_Score=99, Evalue=5e-22,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 35090; Mature: 34959
Theoretical pI: Translated: 10.45; Mature: 10.45
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKQAPAALPAASSRRFNGRRVRLWLDAFGMLLPTILGVLIFFLVPLGISFYLSFTDARL CCCCCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEE FGDPNIIGFSNYQRALSDPTFYRAMWNTAAFSMVTLVVSTVPALLLAVILNERIAGRTFF CCCCCEECCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RAVFFIPVVASVVGVTLLWRYLLNIDFGFVNYALRLFGLQPIPWLTSPEWGLISVILVFS HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHH WKTIGYNMVIFLAGLQGVPPQLYEAASLDGASRWQQFLFITVPMLSPTTFFVLVTTLINC HHHHCHHHHHHEECCCCCCHHHHHHHCCCCHHHHHHHHHEEECCCCHHHHHHHHHHHHHH LQVFDVPVALGLTRSNTVGPADSMLTVVPLLWREAFIGGRMGYASALAWLLFVIILLLTL HHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH IQFRISRRWVHYE HHHHHHHCCCCCC >Mature Secondary Structure AKQAPAALPAASSRRFNGRRVRLWLDAFGMLLPTILGVLIFFLVPLGISFYLSFTDARL CCCCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEE FGDPNIIGFSNYQRALSDPTFYRAMWNTAAFSMVTLVVSTVPALLLAVILNERIAGRTFF CCCCCEECCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RAVFFIPVVASVVGVTLLWRYLLNIDFGFVNYALRLFGLQPIPWLTSPEWGLISVILVFS HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHH WKTIGYNMVIFLAGLQGVPPQLYEAASLDGASRWQQFLFITVPMLSPTTFFVLVTTLINC HHHHCHHHHHHEECCCCCCHHHHHHHCCCCHHHHHHHHHEEECCCCHHHHHHHHHHHHHH LQVFDVPVALGLTRSNTVGPADSMLTVVPLLWREAFIGGRMGYASALAWLLFVIILLLTL HHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH IQFRISRRWVHYE HHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]