Definition Chloroflexus sp. Y-400-fl chromosome, complete genome.
Accession NC_012032
Length 5,268,950

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The map label for this gene is 222526128

Identifier: 222526128

GI number: 222526128

Start: 3568947

End: 3570218

Strand: Direct

Name: 222526128

Synonym: Chy400_2885

Alternate gene names: NA

Gene position: 3568947-3570218 (Clockwise)

Preceding gene: 222526123

Following gene: 222526129

Centisome position: 67.74

GC content: 56.29

Gene sequence:

>1272_bases
ATGCTGGTTGCCGAGTCGACGGCTGCAATCAATGCAGCCTGCTTGAATGCAGACCATGTACGACCGTTGTACGATACCTT
CGGGTTTGCCCGGATTCCGGATACCATTCGCTATCTGTTAACCGGCAAGGCTGCGTCACCGTTACCTGAGGTTGCTCTTA
GTGGCTTACCTGATCATCCGGCGACGGTGGTGATGGTGATGCTCGATTCGTTCGGCTGGCATTTCTTCAGCCAGTATCTT
GAACGGGCACCGTTTTTGCGCCGTTTTCTCCACCACGGGCGAATTTGCCAGTTGACGACCGCTTTTCCCTCCTCTACTCC
TGTCCATGTAACGTTACTCCACACCGGTCTGGCTGTCGATCAGAGTGGTATCTACGAGTGGCATGTCTTTGAACCCGATC
TCCAGGCTGTCATTGGCTCACTGCTCTTTTCTCCCGTCTTTGATCGCAAGGCCGATGGGTTGGTGGCGTATGGTGTTGAT
CCGCTTGCCGTCTATCCGCAGAGCCGTTTCTACCAGCAGTTGCAAACGGCAGGTGCGAGTAGTGTTGTGCTCATGCCGGC
GGCGCTGGCCCATTCGGTGTATACCCGTACCATGTGCAGTGGGGCGTTGGTCGTGCCATTCCAGGATATTCCTGATGCAA
CTGTCCGCCTGCGGTATTTGTTTGAACAACAGGTGGCACCCACCTTTTACCATCTGTACATCGACTCTGTCGATGCTGCG
ATGCATCGGTACGGGCCAGAGTCGGTTCAGGTTGAGAATGAAATTGTCACCACGCTTGATCATCTTGAACAGTATCTCTG
GCCGCTCCTTCACAGGGCACCGCAACCGACCGTCTTGTTATTGACTGCCGATCACGGTCATATAACGGTTGATCCGCAAC
AGGCAATTGTGCTTAACCGGCTATGGCCCGACCTGGAGCGCTTCCTGCGGCAGGGTGGTGATCGCCGACCTCTCCCACCA
TCGGGATCGCCGCGCGTGACGGTCTTGCACGTGCAGCCCGCAGCCGTCGCTGATGTGCAGCTAGCATTGCAACGTCGACT
CGGCGAGCGGGCAACGGTGGTGGCGAGTGCCCGTCTGGTGGAAGATGGCTATTTCGGGCCGCAACCCGGTGAACGGCTAC
GCTCTCGATTGGGTGAATTGATAATTCTCCCTGCACCTGGAGAAGTGATTGTCTGGGATCATCCGCAAGCCAACCCGTTT
ACGTATCGTGGCATGCACGGTGGTCTAACCCCGACAGAGATGCTGACGGAACTGGCCTGGGTTGTGGTATAG

Upstream 100 bases:

>100_bases
TCTTTGCATGCGACAAGTATTGTGATATGGCTACACTGTGTGCAATCGAGTCGGTTATTACCTGTGACATATTGCACGCT
TTATTATTCAGGAGGCGTCT

Downstream 100 bases:

>100_bases
GTGTGGGGATGATGGTTTTCATGCCGGGTCTTTGTCTGTTGTCGCTACTACCCGCACGCAGCCCTTGCCACGATGTGATA
AGATACACGAGAGACGTTTG

Product: type I phosphodiesterase/nucleotide pyrophosphatase

Products: NA

Alternate protein names: Phosphodiesterase; Type I Phosphodiesterase / Nucleotide Pyrophosphatase; AP Superfamily Protein; Nucleotide Pyrophosphatase; Phosphodiesterase I/Nucleotide Pyrophosphatase; LOW QUALITY PROTEIN Phosphodiesterase; Phosphodiesterase/Nucleotide Pyrophosphatase; Phosphodiesterase Protein; Protein Of AP Superfamily

Number of amino acids: Translated: 423; Mature: 423

Protein sequence:

>423_residues
MLVAESTAAINAACLNADHVRPLYDTFGFARIPDTIRYLLTGKAASPLPEVALSGLPDHPATVVMVMLDSFGWHFFSQYL
ERAPFLRRFLHHGRICQLTTAFPSSTPVHVTLLHTGLAVDQSGIYEWHVFEPDLQAVIGSLLFSPVFDRKADGLVAYGVD
PLAVYPQSRFYQQLQTAGASSVVLMPAALAHSVYTRTMCSGALVVPFQDIPDATVRLRYLFEQQVAPTFYHLYIDSVDAA
MHRYGPESVQVENEIVTTLDHLEQYLWPLLHRAPQPTVLLLTADHGHITVDPQQAIVLNRLWPDLERFLRQGGDRRPLPP
SGSPRVTVLHVQPAAVADVQLALQRRLGERATVVASARLVEDGYFGPQPGERLRSRLGELIILPAPGEVIVWDHPQANPF
TYRGMHGGLTPTEMLTELAWVVV

Sequences:

>Translated_423_residues
MLVAESTAAINAACLNADHVRPLYDTFGFARIPDTIRYLLTGKAASPLPEVALSGLPDHPATVVMVMLDSFGWHFFSQYL
ERAPFLRRFLHHGRICQLTTAFPSSTPVHVTLLHTGLAVDQSGIYEWHVFEPDLQAVIGSLLFSPVFDRKADGLVAYGVD
PLAVYPQSRFYQQLQTAGASSVVLMPAALAHSVYTRTMCSGALVVPFQDIPDATVRLRYLFEQQVAPTFYHLYIDSVDAA
MHRYGPESVQVENEIVTTLDHLEQYLWPLLHRAPQPTVLLLTADHGHITVDPQQAIVLNRLWPDLERFLRQGGDRRPLPP
SGSPRVTVLHVQPAAVADVQLALQRRLGERATVVASARLVEDGYFGPQPGERLRSRLGELIILPAPGEVIVWDHPQANPF
TYRGMHGGLTPTEMLTELAWVVV
>Mature_423_residues
MLVAESTAAINAACLNADHVRPLYDTFGFARIPDTIRYLLTGKAASPLPEVALSGLPDHPATVVMVMLDSFGWHFFSQYL
ERAPFLRRFLHHGRICQLTTAFPSSTPVHVTLLHTGLAVDQSGIYEWHVFEPDLQAVIGSLLFSPVFDRKADGLVAYGVD
PLAVYPQSRFYQQLQTAGASSVVLMPAALAHSVYTRTMCSGALVVPFQDIPDATVRLRYLFEQQVAPTFYHLYIDSVDAA
MHRYGPESVQVENEIVTTLDHLEQYLWPLLHRAPQPTVLLLTADHGHITVDPQQAIVLNRLWPDLERFLRQGGDRRPLPP
SGSPRVTVLHVQPAAVADVQLALQRRLGERATVVASARLVEDGYFGPQPGERLRSRLGELIILPAPGEVIVWDHPQANPF
TYRGMHGGLTPTEMLTELAWVVV

Specific function: Unknown

COG id: COG1524

COG function: function code R; Uncharacterized proteins of the AP superfamily

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 46934; Mature: 46934

Theoretical pI: Translated: 6.42; Mature: 6.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLVAESTAAINAACLNADHVRPLYDTFGFARIPDTIRYLLTGKAASPLPEVALSGLPDHP
CEECCCCCHHHHHHCCCCCCCHHHHHCCCHHCCHHHHHHHCCCCCCCCHHHHHCCCCCCC
ATVVMVMLDSFGWHFFSQYLERAPFLRRFLHHGRICQLTTAFPSSTPVHVTLLHTGLAVD
HHHHHHHHHHCCHHHHHHHHHHCHHHHHHHHCCCEEEEEECCCCCCCEEEEEEECCCEEC
QSGIYEWHVFEPDLQAVIGSLLFSPVFDRKADGLVAYGVDPLAVYPQSRFYQQLQTAGAS
CCCCEEEEEECCHHHHHHHHHHHHHHHCCCCCCEEEECCCCEEECCHHHHHHHHHHCCCC
SVVLMPAALAHSVYTRTMCSGALVVPFQDIPDATVRLRYLFEQQVAPTFYHLYIDSVDAA
CEEEHHHHHHHHHHHHHHHCCEEEECCCCCCCHHHHHHHHHHHHCCCEEEEEEHHHHHHH
MHRYGPESVQVENEIVTTLDHLEQYLWPLLHRAPQPTVLLLTADHGHITVDPQQAIVLNR
HHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCEEEECCHHHHHHHH
LWPDLERFLRQGGDRRPLPPSGSPRVTVLHVQPAAVADVQLALQRRLGERATVVASARLV
HHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHCCCHHEEEEHHHHH
EDGYFGPQPGERLRSRLGELIILPAPGEVIVWDHPQANPFTYRGMHGGLTPTEMLTELAW
CCCCCCCCCHHHHHHHCCCEEEEECCCCEEEECCCCCCCCEECCCCCCCCHHHHHHHHHH
VVV
HCC
>Mature Secondary Structure
MLVAESTAAINAACLNADHVRPLYDTFGFARIPDTIRYLLTGKAASPLPEVALSGLPDHP
CEECCCCCHHHHHHCCCCCCCHHHHHCCCHHCCHHHHHHHCCCCCCCCHHHHHCCCCCCC
ATVVMVMLDSFGWHFFSQYLERAPFLRRFLHHGRICQLTTAFPSSTPVHVTLLHTGLAVD
HHHHHHHHHHCCHHHHHHHHHHCHHHHHHHHCCCEEEEEECCCCCCCEEEEEEECCCEEC
QSGIYEWHVFEPDLQAVIGSLLFSPVFDRKADGLVAYGVDPLAVYPQSRFYQQLQTAGAS
CCCCEEEEEECCHHHHHHHHHHHHHHHCCCCCCEEEECCCCEEECCHHHHHHHHHHCCCC
SVVLMPAALAHSVYTRTMCSGALVVPFQDIPDATVRLRYLFEQQVAPTFYHLYIDSVDAA
CEEEHHHHHHHHHHHHHHHCCEEEECCCCCCCHHHHHHHHHHHHCCCEEEEEEHHHHHHH
MHRYGPESVQVENEIVTTLDHLEQYLWPLLHRAPQPTVLLLTADHGHITVDPQQAIVLNR
HHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCEEEECCHHHHHHHH
LWPDLERFLRQGGDRRPLPPSGSPRVTVLHVQPAAVADVQLALQRRLGERATVVASARLV
HHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHCCCHHEEEEHHHHH
EDGYFGPQPGERLRSRLGELIILPAPGEVIVWDHPQANPFTYRGMHGGLTPTEMLTELAW
CCCCCCCCCHHHHHHHCCCEEEEECCCCEEEECCCCCCCCEECCCCCCCCHHHHHHHHHH
VVV
HCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA