Definition Chloroflexus sp. Y-400-fl chromosome, complete genome.
Accession NC_012032
Length 5,268,950

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The map label for this gene is 222526129

Identifier: 222526129

GI number: 222526129

Start: 3570340

End: 3571902

Strand: Direct

Name: 222526129

Synonym: Chy400_2886

Alternate gene names: NA

Gene position: 3570340-3571902 (Clockwise)

Preceding gene: 222526128

Following gene: 222526130

Centisome position: 67.76

GC content: 57.97

Gene sequence:

>1563_bases
GTGTCTGAGACCGAACCCTCACCTGTTCCGTCAACGCCAGGGCCGCGACTGAGTCGTGACACGTGGCTGTTGATCGGTGC
GTTGGCTTTGCTCGGCCTTGGTGTTGCACTGACGTTCATCTTCTCACCCGGCACCAATGTCGTTGACACGACCCCTACGA
TCACCTCACCGATAACTCGCCCGCCAACCCTGACTGCGTCGTACCCGGCACCTACCGGTGCTGCCGGTGGAGCGACAACC
GGCCCGTATCCGGTTACTGTCCCAACGATTGATGTGGCTCAAACCCAGACCAGTGTGGTACTTGAGACGACTGCTCTGGC
CGCTACGCTACAGGCTGAAATGACCGCTACTGCAAGCGGTGTACCGGCATACCCGGTTCCCGAAGGTACCCCACCGTCAG
TGCCGACAATGGTGCCAACCGCTACAAATCCTCCACCAACTGTGCCTCCGCCGCCTACAGCACCACCACCGCCAACACCA
ACCAGCGCCGATCTGATCATTGATGACAGTCCGACGAATCCGCCACCGCCAACCGCTACTCCTCTGCCAACGGCTACGCC
GGCACCAACACCGATCCCGGCTCTGGTCTTGCGGGGTAGTACGCGCTGGGCCAGCGGGCAGGGGCCAATCGTTCTCAATC
GCGATGTGCAGATTCCCCCTGGCAGTGAGTTGATCATTGAGCCGGGTGTGGAAGTACGTTTGGCGCCAGGCGTGTCAATC
TATGTTGATGGTGGACGCATGATTGCCCTGGGCCAGGCCGGCAGTCCAGTGCGTTTTGTGGGCGCAACCGGCGCACGCTG
GAGCGGTATCTTTGGCCGTCCTGGGAGCTTTATTGCACTGGAACATACCGAAATTCGCGGCGGCGGACTGGCGGGAACGG
TGCTGGTCAGTGAAGAGGGAGGGCTGGTTGTTCGCGCTGCCCGTATTACCGACAATGGTGGTGGGGTGTTGGTTGTCGAC
TCGCGGCTTGAACTCAGCCAGAGCGAAATTGCCGGCAATGACGTTCCTTTTGGGGCAGCCCTTGATGCGTCGTACAGTCG
TGGGAATAGTGTCACGTTAACCGGTAATCGGATTGCCGGTAATTTGCTTAGCGCGGGCGCTCCAATGGTGCGAATTGCGA
ATCAAAATGCGCGCGACACCTTAATCCTCACGATTGAAAGCAATCTCTTTCGGGGTGGTAGTGTCAATCTCCAGCTTACG
ACCAACGGTATCTTGCAGGGAACGATCACCTGCAATGCCTTAATCGGCGGCGATTTGGGATTTGGTCTGCGGAGTGAAAC
TCTGCAAGTAGCACCTGATGGTGGCTTCCTGATGCCGCTGCGAATTGAACAGAATCTCCTGGAAGGCCATACACCGGTTA
TTCGTCCAACCTATCTCACCTTTGGCATCGGTCGTGGGGCAGCCAGTGAAGTTGCATTGGATATGCGCAATAACTGGTGG
GGGAATGCGTCTGGTCCGTATGAACCAGATGCCAACCCGCAAGGGATTGGTGATGCAGTCGGAAGTAACATTTCCTTTGC
TCCCTGGCTGACAAGCCGCCCTGGTTGTGTGCCGGCACCTTAA

Upstream 100 bases:

>100_bases
TGCCGGGTCTTTGTCTGTTGTCGCTACTACCCGCACGCAGCCCTTGCCACGATGTGATAAGATACACGAGAGACGTTTGC
ATTGTAGCGGAGGCCAGTCT

Downstream 100 bases:

>100_bases
TTGAAGGGAGACTCTGTTGATTGCACGAATGGCTCGTCCACTGATCTTGGTGGTTGTGATAATGCTTGTGGCGTGTACGG
CTTCAGCGCCGGTAGCCGAC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 520; Mature: 519

Protein sequence:

>520_residues
MSETEPSPVPSTPGPRLSRDTWLLIGALALLGLGVALTFIFSPGTNVVDTTPTITSPITRPPTLTASYPAPTGAAGGATT
GPYPVTVPTIDVAQTQTSVVLETTALAATLQAEMTATASGVPAYPVPEGTPPSVPTMVPTATNPPPTVPPPPTAPPPPTP
TSADLIIDDSPTNPPPPTATPLPTATPAPTPIPALVLRGSTRWASGQGPIVLNRDVQIPPGSELIIEPGVEVRLAPGVSI
YVDGGRMIALGQAGSPVRFVGATGARWSGIFGRPGSFIALEHTEIRGGGLAGTVLVSEEGGLVVRAARITDNGGGVLVVD
SRLELSQSEIAGNDVPFGAALDASYSRGNSVTLTGNRIAGNLLSAGAPMVRIANQNARDTLILTIESNLFRGGSVNLQLT
TNGILQGTITCNALIGGDLGFGLRSETLQVAPDGGFLMPLRIEQNLLEGHTPVIRPTYLTFGIGRGAASEVALDMRNNWW
GNASGPYEPDANPQGIGDAVGSNISFAPWLTSRPGCVPAP

Sequences:

>Translated_520_residues
MSETEPSPVPSTPGPRLSRDTWLLIGALALLGLGVALTFIFSPGTNVVDTTPTITSPITRPPTLTASYPAPTGAAGGATT
GPYPVTVPTIDVAQTQTSVVLETTALAATLQAEMTATASGVPAYPVPEGTPPSVPTMVPTATNPPPTVPPPPTAPPPPTP
TSADLIIDDSPTNPPPPTATPLPTATPAPTPIPALVLRGSTRWASGQGPIVLNRDVQIPPGSELIIEPGVEVRLAPGVSI
YVDGGRMIALGQAGSPVRFVGATGARWSGIFGRPGSFIALEHTEIRGGGLAGTVLVSEEGGLVVRAARITDNGGGVLVVD
SRLELSQSEIAGNDVPFGAALDASYSRGNSVTLTGNRIAGNLLSAGAPMVRIANQNARDTLILTIESNLFRGGSVNLQLT
TNGILQGTITCNALIGGDLGFGLRSETLQVAPDGGFLMPLRIEQNLLEGHTPVIRPTYLTFGIGRGAASEVALDMRNNWW
GNASGPYEPDANPQGIGDAVGSNISFAPWLTSRPGCVPAP
>Mature_519_residues
SETEPSPVPSTPGPRLSRDTWLLIGALALLGLGVALTFIFSPGTNVVDTTPTITSPITRPPTLTASYPAPTGAAGGATTG
PYPVTVPTIDVAQTQTSVVLETTALAATLQAEMTATASGVPAYPVPEGTPPSVPTMVPTATNPPPTVPPPPTAPPPPTPT
SADLIIDDSPTNPPPPTATPLPTATPAPTPIPALVLRGSTRWASGQGPIVLNRDVQIPPGSELIIEPGVEVRLAPGVSIY
VDGGRMIALGQAGSPVRFVGATGARWSGIFGRPGSFIALEHTEIRGGGLAGTVLVSEEGGLVVRAARITDNGGGVLVVDS
RLELSQSEIAGNDVPFGAALDASYSRGNSVTLTGNRIAGNLLSAGAPMVRIANQNARDTLILTIESNLFRGGSVNLQLTT
NGILQGTITCNALIGGDLGFGLRSETLQVAPDGGFLMPLRIEQNLLEGHTPVIRPTYLTFGIGRGAASEVALDMRNNWWG
NASGPYEPDANPQGIGDAVGSNISFAPWLTSRPGCVPAP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 53077; Mature: 52946

Theoretical pI: Translated: 4.46; Mature: 4.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSETEPSPVPSTPGPRLSRDTWLLIGALALLGLGVALTFIFSPGTNVVDTTPTITSPITR
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCEEEEEEECCCCCCEECCCCCCCCCCC
PPTLTASYPAPTGAAGGATTGPYPVTVPTIDVAQTQTSVVLETTALAATLQAEMTATASG
CCEEEECCCCCCCCCCCCCCCCEEEEECEEECCCCCCEEEEEEHHHEEEHHHHEEECCCC
VPAYPVPEGTPPSVPTMVPTATNPPPTVPPPPTAPPPPTPTSADLIIDDSPTNPPPPTAT
CCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCC
PLPTATPAPTPIPALVLRGSTRWASGQGPIVLNRDVQIPPGSELIIEPGVEVRLAPGVSI
CCCCCCCCCCCCCEEEEECCCCCCCCCCCEEECCCCCCCCCCCEEECCCCEEEECCCEEE
YVDGGRMIALGQAGSPVRFVGATGARWSGIFGRPGSFIALEHTEIRGGGLAGTVLVSEEG
EECCCEEEEECCCCCCEEEEECCCCCCCCCCCCCCCEEEEEEEEECCCCEEEEEEEECCC
GLVVRAARITDNGGGVLVVDSRLELSQSEIAGNDVPFGAALDASYSRGNSVTLTGNRIAG
CEEEEEEEEECCCCCEEEECCCCCCCHHHCCCCCCCCCEEECCCCCCCCEEEEECCHHCC
NLLSAGAPMVRIANQNARDTLILTIESNLFRGGSVNLQLTTNGILQGTITCNALIGGDLG
HHHHCCCCEEEEECCCCCEEEEEEEECCCCCCCEEEEEEEECCEEEEEEEEEEEECCCCC
FGLRSETLQVAPDGGFLMPLRIEQNLLEGHTPVIRPTYLTFGIGRGAASEVALDMRNNWW
CCCCCCEEEECCCCCEEEEEEECHHHHCCCCCEEEEEEEEEECCCCCCCCEEEECCCCCC
GNASGPYEPDANPQGIGDAVGSNISFAPWLTSRPGCVPAP
CCCCCCCCCCCCCCCCHHHHCCCCEECCCCCCCCCCCCCC
>Mature Secondary Structure 
SETEPSPVPSTPGPRLSRDTWLLIGALALLGLGVALTFIFSPGTNVVDTTPTITSPITR
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCEEEEEEECCCCCCEECCCCCCCCCCC
PPTLTASYPAPTGAAGGATTGPYPVTVPTIDVAQTQTSVVLETTALAATLQAEMTATASG
CCEEEECCCCCCCCCCCCCCCCEEEEECEEECCCCCCEEEEEEHHHEEEHHHHEEECCCC
VPAYPVPEGTPPSVPTMVPTATNPPPTVPPPPTAPPPPTPTSADLIIDDSPTNPPPPTAT
CCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCC
PLPTATPAPTPIPALVLRGSTRWASGQGPIVLNRDVQIPPGSELIIEPGVEVRLAPGVSI
CCCCCCCCCCCCCEEEEECCCCCCCCCCCEEECCCCCCCCCCCEEECCCCEEEECCCEEE
YVDGGRMIALGQAGSPVRFVGATGARWSGIFGRPGSFIALEHTEIRGGGLAGTVLVSEEG
EECCCEEEEECCCCCCEEEEECCCCCCCCCCCCCCCEEEEEEEEECCCCEEEEEEEECCC
GLVVRAARITDNGGGVLVVDSRLELSQSEIAGNDVPFGAALDASYSRGNSVTLTGNRIAG
CEEEEEEEEECCCCCEEEECCCCCCCHHHCCCCCCCCCEEECCCCCCCCEEEEECCHHCC
NLLSAGAPMVRIANQNARDTLILTIESNLFRGGSVNLQLTTNGILQGTITCNALIGGDLG
HHHHCCCCEEEEECCCCCEEEEEEEECCCCCCCEEEEEEEECCEEEEEEEEEEEECCCCC
FGLRSETLQVAPDGGFLMPLRIEQNLLEGHTPVIRPTYLTFGIGRGAASEVALDMRNNWW
CCCCCCEEEECCCCCEEEEEEECHHHHCCCCCEEEEEEEEEECCCCCCCCEEEECCCCCC
GNASGPYEPDANPQGIGDAVGSNISFAPWLTSRPGCVPAP
CCCCCCCCCCCCCCCCHHHHCCCCEECCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA