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The map label for this gene is ugpB [C]

Identifier: 222525436

GI number: 222525436

Start: 2763540

End: 2764877

Strand: Reverse

Name: ugpB [C]

Synonym: Chy400_2181

Alternate gene names: 222525436

Gene position: 2764877-2763540 (Counterclockwise)

Preceding gene: 222525437

Following gene: 222525435

Centisome position: 52.47

GC content: 56.73

Gene sequence:

>1338_bases
ATGCATCGTCTGATCAAATTCCTCATCATTCTGACCGTGCTGGCATTGGGGTTGAGTGCCTGTGGTCAGACCACTACCCA
GCAACCAACACCGGAGCCGCAAACCGTCCGCGAGACGGTGACAGTGCGTGAGACGGTGACAGTGCGCGAAACGGTCGTTG
TCCCGGCAGAAAAGATCGAGGTGCGAGTGTCGGGGTGGGCTTCCAGCCCGGCTGAAACTGCCCAGCTTGAGTCGCTACTC
TATCGCTTCTCGGTTGAAAATCCAGATATCCTTGTGAAGTACGAGCCAATCACCGGCGATTACAAGCAGGTATTGCTGAC
CTCGATTGCGTCCGGCACCGAACCAGACATCTTCTACGTCGATATCTTCTGGTGGCTGGAACTGGCTGCAAATGATGCCC
TCTTACCACTCGATGACTTGATGGCAAGCAGTGGCGTCTCACGCGACGATTTCATCCCTTCACTGATCGATGCGTTCACC
TACGAGGGTAAGACCTACGGCATTCCGAAGGACTTCAACACCCTTGGTATGTTCTACAACAAGGACCTCTTCGACAAAGC
CGGTCTTGCCTATCCGACCGATGACTGGACATGGGACGATCTGCGTGAGGCAGCGGCAGCACTCACCGATTTGAGTGATC
CGAACCGTCCAATTTATGGCTTCTGCACGCCACCCGATCCAGGTCGGTTCCCGGTCTTCGTCTTCCAGAACGGTGGCATG
GTCATGAACAGTGACTACAGCGACACCATGCTCGACAGCGAGCCAGCGGTGAAGGCAGCCGAATTCTACACCTCGTTCCG
CACGCAGAACATTGGTGCGCTGCCCTCGGATCTGGGTGAAGGCTGGCAGGGCACACTCTTTGGCAAGGGTCAGTGCGCCA
TGGTCTACGAAGGTGGCTGGCTGATCCCGTACCTGCGCGATCAGTTCCCCAACACCAAGTATGGCGTGGTCATGCCACCC
GCCGGCCCTGGTGGTGAAGGCAATCTGATCTTCACCGTCGCCTGGGGTGTCTCGGCCAACACCAAGAACCCCGATGCAGC
CTGGAAGGTGGTGAACTTCCTGACCAGCGAGGCCAGCCAGAAGACGGTGCTCGAAAGCGGGTTTGCGCTGCCGTCACGGC
AATCGTTGCAGAATAGCGACTACCTGAAGAACAATCCCAACTCGGCTGCTATCTTCAACGGTTCGTTCTTCGGTGCACGA
CCCTTCTTCTGGGGTGCGGCTGGTTCAGATGTGAATGACCAGATGTCGAAGGCGCTGGAGCGCATCTTCAAGGAAAATCA
GCCCGTTCCAGATGCAATGAAACAGGCGGCGGATGCGATCCGAGAAGCATTGCGGTAA

Upstream 100 bases:

>100_bases
ATTGTGCTACGCGAGGAGGGTAAAAAATGGTCTGAAATCGCATCATTTTTCACAATCTAATCAGTGCTGAATTCTCTATT
CATTGGTGAAAGGAGTAGGT

Downstream 100 bases:

>100_bases
TTAAGATGTGCAGCGGCCGGTTTTTCCGGTCGCTGCACCCCACCTGAGCACGGGAGGATTACAATGCGTTCGAGAATTGA
CCGCCGCAAAATTGTGGAAG

Product: family 1 extracellular solute-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 445; Mature: 445

Protein sequence:

>445_residues
MHRLIKFLIILTVLALGLSACGQTTTQQPTPEPQTVRETVTVRETVTVRETVVVPAEKIEVRVSGWASSPAETAQLESLL
YRFSVENPDILVKYEPITGDYKQVLLTSIASGTEPDIFYVDIFWWLELAANDALLPLDDLMASSGVSRDDFIPSLIDAFT
YEGKTYGIPKDFNTLGMFYNKDLFDKAGLAYPTDDWTWDDLREAAAALTDLSDPNRPIYGFCTPPDPGRFPVFVFQNGGM
VMNSDYSDTMLDSEPAVKAAEFYTSFRTQNIGALPSDLGEGWQGTLFGKGQCAMVYEGGWLIPYLRDQFPNTKYGVVMPP
AGPGGEGNLIFTVAWGVSANTKNPDAAWKVVNFLTSEASQKTVLESGFALPSRQSLQNSDYLKNNPNSAAIFNGSFFGAR
PFFWGAAGSDVNDQMSKALERIFKENQPVPDAMKQAADAIREALR

Sequences:

>Translated_445_residues
MHRLIKFLIILTVLALGLSACGQTTTQQPTPEPQTVRETVTVRETVTVRETVVVPAEKIEVRVSGWASSPAETAQLESLL
YRFSVENPDILVKYEPITGDYKQVLLTSIASGTEPDIFYVDIFWWLELAANDALLPLDDLMASSGVSRDDFIPSLIDAFT
YEGKTYGIPKDFNTLGMFYNKDLFDKAGLAYPTDDWTWDDLREAAAALTDLSDPNRPIYGFCTPPDPGRFPVFVFQNGGM
VMNSDYSDTMLDSEPAVKAAEFYTSFRTQNIGALPSDLGEGWQGTLFGKGQCAMVYEGGWLIPYLRDQFPNTKYGVVMPP
AGPGGEGNLIFTVAWGVSANTKNPDAAWKVVNFLTSEASQKTVLESGFALPSRQSLQNSDYLKNNPNSAAIFNGSFFGAR
PFFWGAAGSDVNDQMSKALERIFKENQPVPDAMKQAADAIREALR
>Mature_445_residues
MHRLIKFLIILTVLALGLSACGQTTTQQPTPEPQTVRETVTVRETVTVRETVVVPAEKIEVRVSGWASSPAETAQLESLL
YRFSVENPDILVKYEPITGDYKQVLLTSIASGTEPDIFYVDIFWWLELAANDALLPLDDLMASSGVSRDDFIPSLIDAFT
YEGKTYGIPKDFNTLGMFYNKDLFDKAGLAYPTDDWTWDDLREAAAALTDLSDPNRPIYGFCTPPDPGRFPVFVFQNGGM
VMNSDYSDTMLDSEPAVKAAEFYTSFRTQNIGALPSDLGEGWQGTLFGKGQCAMVYEGGWLIPYLRDQFPNTKYGVVMPP
AGPGGEGNLIFTVAWGVSANTKNPDAAWKVVNFLTSEASQKTVLESGFALPSRQSLQNSDYLKNNPNSAAIFNGSFFGAR
PFFWGAAGSDVNDQMSKALERIFKENQPVPDAMKQAADAIREALR

Specific function: Probably part of an ABC transporter complex [H]

COG id: COG1653

COG function: function code G; ABC-type sugar transport system, periplasmic component

Gene ontology:

Cell location: Periplasm (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 1 family [H]

Homologues:

Organism=Escherichia coli, GI1789862, Length=153, Percent_Identity=32.6797385620915, Blast_Score=62, Evalue=9e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006059
- InterPro:   IPR006061 [H]

Pfam domain/function: PF01547 SBP_bac_1 [H]

EC number: NA

Molecular weight: Translated: 49007; Mature: 49007

Theoretical pI: Translated: 4.27; Mature: 4.27

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHRLIKFLIILTVLALGLSACGQTTTQQPTPEPQTVRETVTVRETVTVRETVVVPAEKIE
CHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHEEHHHEEEEEEEEEECHHHEE
VRVSGWASSPAETAQLESLLYRFSVENPDILVKYEPITGDYKQVLLTSIASGTEPDIFYV
EEEECCCCCCHHHHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHCCCCCCEEEE
DIFWWLELAANDALLPLDDLMASSGVSRDDFIPSLIDAFTYEGKTYGIPKDFNTLGMFYN
EHHHHHHHHCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHCCCEEECCCCCCHHHHHHHC
KDLFDKAGLAYPTDDWTWDDLREAAAALTDLSDPNRPIYGFCTPPDPGRFPVFVFQNGGM
CCHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCEEEEEECCCE
VMNSDYSDTMLDSEPAVKAAEFYTSFRTQNIGALPSDLGEGWQGTLFGKGQCAMVYEGGW
EEECCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHCCCCCEEEECCCCEEEEECCCE
LIPYLRDQFPNTKYGVVMPPAGPGGEGNLIFTVAWGVSANTKNPDAAWKVVNFLTSEASQ
EEHHHHHCCCCCCCCEEECCCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHH
KTVLESGFALPSRQSLQNSDYLKNNPNSAAIFNGSFFGARPFFWGAAGSDVNDQMSKALE
HHHHHHCCCCCCHHHCCCCCCCCCCCCCEEEECCCCCCCCCEEECCCCCCHHHHHHHHHH
RIFKENQPVPDAMKQAADAIREALR
HHHHCCCCCHHHHHHHHHHHHHHHC
>Mature Secondary Structure
MHRLIKFLIILTVLALGLSACGQTTTQQPTPEPQTVRETVTVRETVTVRETVVVPAEKIE
CHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHEEHHHEEEEEEEEEECHHHEE
VRVSGWASSPAETAQLESLLYRFSVENPDILVKYEPITGDYKQVLLTSIASGTEPDIFYV
EEEECCCCCCHHHHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHCCCCCCEEEE
DIFWWLELAANDALLPLDDLMASSGVSRDDFIPSLIDAFTYEGKTYGIPKDFNTLGMFYN
EHHHHHHHHCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHCCCEEECCCCCCHHHHHHHC
KDLFDKAGLAYPTDDWTWDDLREAAAALTDLSDPNRPIYGFCTPPDPGRFPVFVFQNGGM
CCHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCEEEEEECCCE
VMNSDYSDTMLDSEPAVKAAEFYTSFRTQNIGALPSDLGEGWQGTLFGKGQCAMVYEGGW
EEECCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHCCCCCEEEECCCCEEEEECCCE
LIPYLRDQFPNTKYGVVMPPAGPGGEGNLIFTVAWGVSANTKNPDAAWKVVNFLTSEASQ
EEHHHHHCCCCCCCCEEECCCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHH
KTVLESGFALPSRQSLQNSDYLKNNPNSAAIFNGSFFGARPFFWGAAGSDVNDQMSKALE
HHHHHHCCCCCCHHHCCCCCCCCCCCCCEEEECCCCCCCCCEEECCCCCCHHHHHHHHHH
RIFKENQPVPDAMKQAADAIREALR
HHHHCCCCCHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA