| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
Click here to switch to the map view.
The map label for this gene is yesP [H]
Identifier: 222525435
GI number: 222525435
Start: 2762586
End: 2763476
Strand: Reverse
Name: yesP [H]
Synonym: Chy400_2180
Alternate gene names: 222525435
Gene position: 2763476-2762586 (Counterclockwise)
Preceding gene: 222525436
Following gene: 222525434
Centisome position: 52.45
GC content: 52.19
Gene sequence:
>891_bases ATGCGTTCGAGAATTGACCGCCGCAAAATTGTGGAAGCCCTAAACGGATACCTCTTCATTTCGCCCTGGTTGATCATTTT CGTCATCTTCAGTCTCATCTCGCTTGGCTACGCGGTCTACCTCTCGTTCACCGAATACAATCTGCTCCGACCGCCGCGCT GGTGGGGAATAGAGGGTTATCAGCGGGTGCTGGAAAACGAACTCTTTTTGACCAAAGCACTACCCAACACCTTCAAATAT GTGCTGATTGTAGTGCCAATCCAGACCTTTCTCAGTCTGGTACTGGCCTTCGCGATGGATCAAAACCTGCGCTTTCAACG CTTTTTCCGAACTATTTTTTACCTGCCATCGGTCACTTCGTCGGTCGTGATTTCACTCATCTTCATCTGGATTTTCGCGC CACAGGGTATCTTTAACCAGATTACCGGCCTGACGGTCAACTGGCTTGACGATCCGCGTACCGCGTTTTACGTGATTATG GGCATGAATATCTTTACCACCAGCGGTACCTTAATGCTGATCTTCCTGGCCGGTCTACAGGATATTCCGCTGGCAGTCTA CGAGGCAGCCGAGATTGATGGTGCCAATGGGTTGCAGAAGTTTTTCTACATTACTATCCCGATGTTGCGTCCGGTGATCT TCTTCGTGGTGACCGTTGGGGTTATCGGCTGCTTCCAGGTCTTCGACCAGATTTATGTTATGACCGCCGGTGGGCCACTG GATAGCACCACCACCATTACCTACCTGATCTACAAGTGGGCATTCCGCGACACGCGCATCCAGATGGGGCAAGCCTCGGC GCTGGCAGTGATTTTGACCCTGATTATCCTGGCCGTCACCCTCTTGCAGCGCCGGGTGATCGAGGGTAGCGGCAGCGGTG CTGAACGTTAG
Upstream 100 bases:
>100_bases ACAGGCGGCGGATGCGATCCGAGAAGCATTGCGGTAATTAAGATGTGCAGCGGCCGGTTTTTCCGGTCGCTGCACCCCAC CTGAGCACGGGAGGATTACA
Downstream 100 bases:
>100_bases AAAGGTGAGAGCGATGGCAGTAACCACCCGTTCCCAACCCCAGGCCTACGAGCAGACTGTCTTCTTTGACCGGCTGCGCA AATATCTCTTCTTCGCGATG
Product: binding-protein-dependent transport systems inner membrane component
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 296; Mature: 296
Protein sequence:
>296_residues MRSRIDRRKIVEALNGYLFISPWLIIFVIFSLISLGYAVYLSFTEYNLLRPPRWWGIEGYQRVLENELFLTKALPNTFKY VLIVVPIQTFLSLVLAFAMDQNLRFQRFFRTIFYLPSVTSSVVISLIFIWIFAPQGIFNQITGLTVNWLDDPRTAFYVIM GMNIFTTSGTLMLIFLAGLQDIPLAVYEAAEIDGANGLQKFFYITIPMLRPVIFFVVTVGVIGCFQVFDQIYVMTAGGPL DSTTTITYLIYKWAFRDTRIQMGQASALAVILTLIILAVTLLQRRVIEGSGSGAER
Sequences:
>Translated_296_residues MRSRIDRRKIVEALNGYLFISPWLIIFVIFSLISLGYAVYLSFTEYNLLRPPRWWGIEGYQRVLENELFLTKALPNTFKY VLIVVPIQTFLSLVLAFAMDQNLRFQRFFRTIFYLPSVTSSVVISLIFIWIFAPQGIFNQITGLTVNWLDDPRTAFYVIM GMNIFTTSGTLMLIFLAGLQDIPLAVYEAAEIDGANGLQKFFYITIPMLRPVIFFVVTVGVIGCFQVFDQIYVMTAGGPL DSTTTITYLIYKWAFRDTRIQMGQASALAVILTLIILAVTLLQRRVIEGSGSGAER >Mature_296_residues MRSRIDRRKIVEALNGYLFISPWLIIFVIFSLISLGYAVYLSFTEYNLLRPPRWWGIEGYQRVLENELFLTKALPNTFKY VLIVVPIQTFLSLVLAFAMDQNLRFQRFFRTIFYLPSVTSSVVISLIFIWIFAPQGIFNQITGLTVNWLDDPRTAFYVIM GMNIFTTSGTLMLIFLAGLQDIPLAVYEAAEIDGANGLQKFFYITIPMLRPVIFFVVTVGVIGCFQVFDQIYVMTAGGPL DSTTTITYLIYKWAFRDTRIQMGQASALAVILTLIILAVTLLQRRVIEGSGSGAER
Specific function: Part of a binding-protein-dependent transport system. Probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG1175
COG function: function code G; ABC-type sugar transport systems, permease components
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1789861, Length=280, Percent_Identity=28.2142857142857, Blast_Score=105, Evalue=3e-24, Organism=Escherichia coli, GI1787570, Length=247, Percent_Identity=31.5789473684211, Blast_Score=102, Evalue=3e-23, Organism=Escherichia coli, GI1790465, Length=228, Percent_Identity=28.0701754385965, Blast_Score=67, Evalue=1e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 33706; Mature: 33706
Theoretical pI: Translated: 9.38; Mature: 9.38
Prosite motif: PS00591 GLYCOSYL_HYDROL_F10 ; PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRSRIDRRKIVEALNGYLFISPWLIIFVIFSLISLGYAVYLSFTEYNLLRPPRWWGIEGY CCCCHHHHHHHHHHCCCEEHHHHHHHHHHHHHHHHHHHHEEEEHHHCCCCCCCCCCHHHH QRVLENELFLTKALPNTFKYVLIVVPIQTFLSLVLAFAMDQNLRFQRFFRTIFYLPSVTS HHHHHHHHHHHHHCCCHHHHHHEEEEHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHH SVVISLIFIWIFAPQGIFNQITGLTVNWLDDPRTAFYVIMGMNIFTTSGTLMLIFLAGLQ HHHHHHHHHHHHCCCHHHHHHCCCEEEECCCCCCEEEEEECCEEEECCCHHHHHHHHCCC DIPLAVYEAAEIDGANGLQKFFYITIPMLRPVIFFVVTVGVIGCFQVFDQIYVMTAGGPL CCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCC DSTTTITYLIYKWAFRDTRIQMGQASALAVILTLIILAVTLLQRRVIEGSGSGAER CCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure MRSRIDRRKIVEALNGYLFISPWLIIFVIFSLISLGYAVYLSFTEYNLLRPPRWWGIEGY CCCCHHHHHHHHHHCCCEEHHHHHHHHHHHHHHHHHHHHEEEEHHHCCCCCCCCCCHHHH QRVLENELFLTKALPNTFKYVLIVVPIQTFLSLVLAFAMDQNLRFQRFFRTIFYLPSVTS HHHHHHHHHHHHHCCCHHHHHHEEEEHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHH SVVISLIFIWIFAPQGIFNQITGLTVNWLDDPRTAFYVIMGMNIFTTSGTLMLIFLAGLQ HHHHHHHHHHHHCCCHHHHHHCCCEEEECCCCCCEEEEEECCEEEECCCHHHHHHHHCCC DIPLAVYEAAEIDGANGLQKFFYITIPMLRPVIFFVVTVGVIGCFQVFDQIYVMTAGGPL CCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCC DSTTTITYLIYKWAFRDTRIQMGQASALAVILTLIILAVTLLQRRVIEGSGSGAER CCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]