| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is 222525285
Identifier: 222525285
GI number: 222525285
Start: 2565584
End: 2566705
Strand: Reverse
Name: 222525285
Synonym: Chy400_2026
Alternate gene names: NA
Gene position: 2566705-2565584 (Counterclockwise)
Preceding gene: 222525287
Following gene: 222525265
Centisome position: 48.71
GC content: 50.09
Gene sequence:
>1122_bases ATGCAACTGCAAACCATCAAGGTTCAGGGATTCAAATCAATCCGCGAACTGGAATTTTCGCTACGCCCCCTCAATATCTT GATCGGTGCGAATGGTAGCGGAAAATCAAACATCTTAGGCGTCTTTGCATTTCTCCGCGCAATGGTTGAACGCCATTTAC AGATGTATGTTGCCCGAGCCGGCGGGGCAGATCGCATACTCCACTTCGGTCAAAAAAACACCGACTCATTGCAAATTGAA TTGTGGTTTACGAAGAAAAATAGGCGGGCCAGGGGGAATATCATCGCAAATGGATATCGCTGTGCGCTGGTTCCAGCCGT AGGAGATCGCTTCGTGTTTGCCGAGGAACGCGCATTCTTCCATGACCGCCGCTACGAGAAGCCCGTTGAAACACTGTTGG GTTCCGGTCACGAAGAGAGTCTGTTACCGGCCAGTTACGGCAGAGGTATCCCGGCGGATGTCTTCGAGGCAATGCAAAGC TGGATCGTGTATCACTTTCACGATACCAGTGATTCGGCTAGAGTGAAACAAACTGGCGATATTGACGATAACTATTGGTT ACGTCAGGATGCATCGAATCTGACCGCATATCTGTACTATATACAGCAACAAGCGCCAGACCATTATCGCAATATTGTCG ATGTTATCCGCATGGTTGCCCCCTTTTTCGATGATTTTGTGCTCCGACCCAGTCCGTTTAACCCTAACAAAATAAAACTG GAATGGCGAGAGCGAGGCAGCGATACCTACTTTGATGCTTATGCTCTCTCTGACGGAACCCTACGCTTCATCTGCCTGGC AACGCTGCTCCTCCAACCGGCACGGAAGTTTCCGGCCATCATCTTACTTGATGAACCAGAGATGGGGTTACACCCTTACG CCATACACGTACTGGCCGAATTGCTACATAGTGCAGCCACGCAAACGCAAGTCATTGTGGCTACTCAATCGGTAACGCTC GTTAACCAGTTTGAGCCGGAAGACATCGTTGTTGTTGAACGACAGGATGGTCAGCCTGTCTGTAGACGCTTGACGATGGA GGAGACTGAGACGTGGCTCGACGGTTACGGGCTGGGTGATTTGTGGGAAAAGAATATTCTTGGTGGCAGGCCACTGCCAT AA
Upstream 100 bases:
>100_bases TCGTAGCACTACCGAGGCACTGAGAGAACCTTTGGGCGGGTAGGGTTGTGGTCATTTGCGGATGCGGGGTGCCGGGAAAG ACATGAGGAAGGATGGGCAC
Downstream 100 bases:
>100_bases CGCATTCCTGGAAGGCATCTTACCCGTCATTGCAGTACGTGTTGCGGTTGAATAACTCTCAACCATCATCCCAACGTAGC ATTATGCAACAACCTGACGT
Product: SMC domain-containing protein
Products: NA
Alternate protein names: ATPase-Like Protein; SMC Domain-Containing Protein; ATPase; RecF/RecN/SMC N Terminal Domain; ATPase-Like; Recf Like Family Protein; Endonuclease III; RecF/RecN/SMC Domain-Containing Protein
Number of amino acids: Translated: 373; Mature: 373
Protein sequence:
>373_residues MQLQTIKVQGFKSIRELEFSLRPLNILIGANGSGKSNILGVFAFLRAMVERHLQMYVARAGGADRILHFGQKNTDSLQIE LWFTKKNRRARGNIIANGYRCALVPAVGDRFVFAEERAFFHDRRYEKPVETLLGSGHEESLLPASYGRGIPADVFEAMQS WIVYHFHDTSDSARVKQTGDIDDNYWLRQDASNLTAYLYYIQQQAPDHYRNIVDVIRMVAPFFDDFVLRPSPFNPNKIKL EWRERGSDTYFDAYALSDGTLRFICLATLLLQPARKFPAIILLDEPEMGLHPYAIHVLAELLHSAATQTQVIVATQSVTL VNQFEPEDIVVVERQDGQPVCRRLTMEETETWLDGYGLGDLWEKNILGGRPLP
Sequences:
>Translated_373_residues MQLQTIKVQGFKSIRELEFSLRPLNILIGANGSGKSNILGVFAFLRAMVERHLQMYVARAGGADRILHFGQKNTDSLQIE LWFTKKNRRARGNIIANGYRCALVPAVGDRFVFAEERAFFHDRRYEKPVETLLGSGHEESLLPASYGRGIPADVFEAMQS WIVYHFHDTSDSARVKQTGDIDDNYWLRQDASNLTAYLYYIQQQAPDHYRNIVDVIRMVAPFFDDFVLRPSPFNPNKIKL EWRERGSDTYFDAYALSDGTLRFICLATLLLQPARKFPAIILLDEPEMGLHPYAIHVLAELLHSAATQTQVIVATQSVTL VNQFEPEDIVVVERQDGQPVCRRLTMEETETWLDGYGLGDLWEKNILGGRPLP >Mature_373_residues MQLQTIKVQGFKSIRELEFSLRPLNILIGANGSGKSNILGVFAFLRAMVERHLQMYVARAGGADRILHFGQKNTDSLQIE LWFTKKNRRARGNIIANGYRCALVPAVGDRFVFAEERAFFHDRRYEKPVETLLGSGHEESLLPASYGRGIPADVFEAMQS WIVYHFHDTSDSARVKQTGDIDDNYWLRQDASNLTAYLYYIQQQAPDHYRNIVDVIRMVAPFFDDFVLRPSPFNPNKIKL EWRERGSDTYFDAYALSDGTLRFICLATLLLQPARKFPAIILLDEPEMGLHPYAIHVLAELLHSAATQTQVIVATQSVTL VNQFEPEDIVVVERQDGQPVCRRLTMEETETWLDGYGLGDLWEKNILGGRPLP
Specific function: Unknown
COG id: COG4637
COG function: function code R; Predicted ATPase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42537; Mature: 42537
Theoretical pI: Translated: 6.36; Mature: 6.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQLQTIKVQGFKSIRELEFSLRPLNILIGANGSGKSNILGVFAFLRAMVERHLQMYVARA CCEEEEEHHHHHHHHHHHHCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHC GGADRILHFGQKNTDSLQIELWFTKKNRRARGNIIANGYRCALVPAVGDRFVFAEERAFF CCHHHHHCCCCCCCCEEEEEEEEECCCCCCCCCEEECCEEEEEEECCCCEEEEEHHHHHH HDRRYEKPVETLLGSGHEESLLPASYGRGIPADVFEAMQSWIVYHFHDTSDSARVKQTGD HHHHCCCHHHHHHCCCCCCCCCCHHCCCCCCHHHHHHHHHCEEEEEECCCCCCEEEECCC IDDNYWLRQDASNLTAYLYYIQQQAPDHYRNIVDVIRMVAPFFDDFVLRPSPFNPNKIKL CCCCCEECCCCCCCEEEEEEHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEE EWRERGSDTYFDAYALSDGTLRFICLATLLLQPARKFPAIILLDEPEMGLHPYAIHVLAE EEECCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCHHHHHHHHH LLHSAATQTQVIVATQSVTLVNQFEPEDIVVVERQDGQPVCRRLTMEETETWLDGYGLGD HHHHHCCCCEEEEEEEEEEEEECCCCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCH LWEKNILGGRPLP HHHHCCCCCCCCC >Mature Secondary Structure MQLQTIKVQGFKSIRELEFSLRPLNILIGANGSGKSNILGVFAFLRAMVERHLQMYVARA CCEEEEEHHHHHHHHHHHHCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHC GGADRILHFGQKNTDSLQIELWFTKKNRRARGNIIANGYRCALVPAVGDRFVFAEERAFF CCHHHHHCCCCCCCCEEEEEEEEECCCCCCCCCEEECCEEEEEEECCCCEEEEEHHHHHH HDRRYEKPVETLLGSGHEESLLPASYGRGIPADVFEAMQSWIVYHFHDTSDSARVKQTGD HHHHCCCHHHHHHCCCCCCCCCCHHCCCCCCHHHHHHHHHCEEEEEECCCCCCEEEECCC IDDNYWLRQDASNLTAYLYYIQQQAPDHYRNIVDVIRMVAPFFDDFVLRPSPFNPNKIKL CCCCCEECCCCCCCEEEEEEHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEE EWRERGSDTYFDAYALSDGTLRFICLATLLLQPARKFPAIILLDEPEMGLHPYAIHVLAE EEECCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCHHHHHHHHH LLHSAATQTQVIVATQSVTLVNQFEPEDIVVVERQDGQPVCRRLTMEETETWLDGYGLGD HHHHHCCCCEEEEEEEEEEEEECCCCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCH LWEKNILGGRPLP HHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA