| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is blaI [H]
Identifier: 222525265
GI number: 222525265
Start: 2541572
End: 2541997
Strand: Reverse
Name: blaI [H]
Synonym: Chy400_2005
Alternate gene names: 222525265
Gene position: 2541997-2541572 (Counterclockwise)
Preceding gene: 222525285
Following gene: 222525261
Centisome position: 48.24
GC content: 48.59
Gene sequence:
>426_bases ATGGCGTTCAACCTGCGTTTCCGCTTCAGCCCGACGAAAGATGGTCTGGTTAAGGTACTGGGTCCACTCGAGACAGAGAT TATGCAAATCCTCTGGCAAGAGGGATCGAGTACAGTGAAAAAGGTACATCGGAAGCTGGCCCAACAGCGCGATATTGCGT ACACAACCGTTATGACTACTATGAGTCGCCTGGCCGATAAGGGTGTCCTGAATCGTGAGCGCGACGGGCTGGCATACGTG TACACCCCGGTTATCTCTGAAGATGAATTTGTTAATTTGGTTGTACGACAGGTTCTGGATGGCCTACTTGATGATTATAG CGATACTGCCATTTCGTACATGGTTGATTATCTGGCAAAAAATAATCCTGCCGAATTGCGTCGCCTCCAGCGTGAGATTA GTCAGCGGTTAAACGGAACAAAGTAA
Upstream 100 bases:
>100_bases TGTAATGTTTTCCTCTTCTCGAAATGCCTGTAACGCCGTACACTCGCTCTCAAGAAGTGCTGTGCTATCGCTACCGTCAA CGCACGTAAAGGGGTGTATT
Downstream 100 bases:
>100_bases TCGCTTTCCCAAACGGTGAGTGGCGTGGATTGACATCCGCGCCACTCGCTGCTGTTCATCTACGACAGAGCCTCTCCCCA CAAGTCGTACGCAGTCGCCT
Product: CopY family transcriptional repressor
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 141; Mature: 140
Protein sequence:
>141_residues MAFNLRFRFSPTKDGLVKVLGPLETEIMQILWQEGSSTVKKVHRKLAQQRDIAYTTVMTTMSRLADKGVLNRERDGLAYV YTPVISEDEFVNLVVRQVLDGLLDDYSDTAISYMVDYLAKNNPAELRRLQREISQRLNGTK
Sequences:
>Translated_141_residues MAFNLRFRFSPTKDGLVKVLGPLETEIMQILWQEGSSTVKKVHRKLAQQRDIAYTTVMTTMSRLADKGVLNRERDGLAYV YTPVISEDEFVNLVVRQVLDGLLDDYSDTAISYMVDYLAKNNPAELRRLQREISQRLNGTK >Mature_140_residues AFNLRFRFSPTKDGLVKVLGPLETEIMQILWQEGSSTVKKVHRKLAQQRDIAYTTVMTTMSRLADKGVLNRERDGLAYVY TPVISEDEFVNLVVRQVLDGLLDDYSDTAISYMVDYLAKNNPAELRRLQREISQRLNGTK
Specific function: Transcription regulator that binds to an inverted DNA repeat with the consensus sequence 5'-TAC[GT]AC-NNNNN-GT[AC]GTA-3' and regulates genes involved in antibiotic transport, detoxification and cell wall function. Also regulates its own transcription. Bin
COG id: COG3682
COG function: function code K; Predicted transcriptional regulator
Gene ontology:
Cell location: Cytoplasmic [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the BlaI transcriptional regulatory family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005650 - InterPro: IPR011991 [H]
Pfam domain/function: PF03965 Pencillinase_R [H]
EC number: NA
Molecular weight: Translated: 16186; Mature: 16055
Theoretical pI: Translated: 9.33; Mature: 9.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAFNLRFRFSPTKDGLVKVLGPLETEIMQILWQEGSSTVKKVHRKLAQQRDIAYTTVMTT CEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH MSRLADKGVLNRERDGLAYVYTPVISEDEFVNLVVRQVLDGLLDDYSDTAISYMVDYLAK HHHHHHHCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHC NNPAELRRLQREISQRLNGTK CCHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure AFNLRFRFSPTKDGLVKVLGPLETEIMQILWQEGSSTVKKVHRKLAQQRDIAYTTVMTT EEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH MSRLADKGVLNRERDGLAYVYTPVISEDEFVNLVVRQVLDGLLDDYSDTAISYMVDYLAK HHHHHHHCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHC NNPAELRRLQREISQRLNGTK CCHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]