| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is 222525239
Identifier: 222525239
GI number: 222525239
Start: 2511461
End: 2512549
Strand: Reverse
Name: 222525239
Synonym: Chy400_1979
Alternate gene names: NA
Gene position: 2512549-2511461 (Counterclockwise)
Preceding gene: 222525240
Following gene: 222525235
Centisome position: 47.69
GC content: 56.11
Gene sequence:
>1089_bases GTGAAGGTTGCACTCATTGCTCTACCCGGCAAACAGACCAATCAGATGCCGCCGCTGACTCTGGCCTACGTGGCGGCTGT TTTGGAACAACGTCGCATCATTGTGCGCATGTACGACCATGCCCTGGATGCAACGGGAAGCTGGCACGATATTCGGCGTC GCCTGCAAACGTTTCAGCCCCAACGTGTCATCGTCGGCGGTGAAGATAGCCGCACGATTGAACAGGCAGTCGCGCAGATT CATCAGTCTTATCCTGACATTTTGCCATTGCTGGTTCAACGCAACGGTACTGATGCACCCGCAGCCATCACCGGTGTCCT GGCCTGGCTTGATGGCGTAGCAACGGTCAATCAATGCCTGCCAAACGATGTCCCCTTTCCGGCCCGTCATCTGTTGTCGC TTGAGCACTACGCACTCCGTGCACCGGGTGGAGAGCTACAAACCCCCGTTGTGATCGGCTGGCATATCAATGGGCAATGG CACATGCGCCAGCCCCGCCAGATCGGTCAGGAGCTGCGCACGCTGGTGGAAGAGGCCGGAATCCGCCACGTACTGTTTTG CGAACCGGCATTGACCATTGATGAACAGTGGTTTACTGAACTACTCAACTATCTGATAAGCGCCAGTTTGAATGTCAAAT GGCAGGCAGCGGTCGCCCTCGAACACCTGGACGAAGAGACGATTCCGCGGCTGGCTCAGGCCGGTTGTGAAGCACTGACG TTTGTCATTGCCGCTACCAGCATTTTTGACTCTGCCAGCAGGCGTAACCAGGCGCGTAAACTGCTCACTACTATCCGTGA GCATGGTATCTACACCCACGCGACTATCCTGCTCGAACCGCCTTACGAATCCATCGCTCGCCTGATCGATGTTGCGGCTA CGTTTAGCCTTAACGATGTCTCTTTTGAATTGATGCAGACGATGCGGGTTGGCGATGACGAGCAAACCATCAAACGCTTT GCCCGTCAACGGTATCAGGAAGGACAAACCCGCCAGCGCCTGATTGATCGCTTTGGCCCGGTGCTCGGCGGTTTGCTCTG GCAACTACGGGTGCAGCACGTGGATGAGGATGAGGAATTGGGTGGGTAG
Upstream 100 bases:
>100_bases ATCGAGTAGTCTGATCACTAGTGAAGATTCTTGTTCACAGTTGGCGAAGCCCTTTCTGACATAGTAGTCGCTATCCAGAC AGGTTGGCCGGAGAAACTAC
Downstream 100 bases:
>100_bases AAGCAGGTAAACTTCCTTATATCATCCTCACCGCCACCCCCCGTTCAGCCAGGTAGCGTTTGACATCGGCCACTGAGTAG TCGCCGAAGTGGAAGATGGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 362; Mature: 362
Protein sequence:
>362_residues MKVALIALPGKQTNQMPPLTLAYVAAVLEQRRIIVRMYDHALDATGSWHDIRRRLQTFQPQRVIVGGEDSRTIEQAVAQI HQSYPDILPLLVQRNGTDAPAAITGVLAWLDGVATVNQCLPNDVPFPARHLLSLEHYALRAPGGELQTPVVIGWHINGQW HMRQPRQIGQELRTLVEEAGIRHVLFCEPALTIDEQWFTELLNYLISASLNVKWQAAVALEHLDEETIPRLAQAGCEALT FVIAATSIFDSASRRNQARKLLTTIREHGIYTHATILLEPPYESIARLIDVAATFSLNDVSFELMQTMRVGDDEQTIKRF ARQRYQEGQTRQRLIDRFGPVLGGLLWQLRVQHVDEDEELGG
Sequences:
>Translated_362_residues MKVALIALPGKQTNQMPPLTLAYVAAVLEQRRIIVRMYDHALDATGSWHDIRRRLQTFQPQRVIVGGEDSRTIEQAVAQI HQSYPDILPLLVQRNGTDAPAAITGVLAWLDGVATVNQCLPNDVPFPARHLLSLEHYALRAPGGELQTPVVIGWHINGQW HMRQPRQIGQELRTLVEEAGIRHVLFCEPALTIDEQWFTELLNYLISASLNVKWQAAVALEHLDEETIPRLAQAGCEALT FVIAATSIFDSASRRNQARKLLTTIREHGIYTHATILLEPPYESIARLIDVAATFSLNDVSFELMQTMRVGDDEQTIKRF ARQRYQEGQTRQRLIDRFGPVLGGLLWQLRVQHVDEDEELGG >Mature_362_residues MKVALIALPGKQTNQMPPLTLAYVAAVLEQRRIIVRMYDHALDATGSWHDIRRRLQTFQPQRVIVGGEDSRTIEQAVAQI HQSYPDILPLLVQRNGTDAPAAITGVLAWLDGVATVNQCLPNDVPFPARHLLSLEHYALRAPGGELQTPVVIGWHINGQW HMRQPRQIGQELRTLVEEAGIRHVLFCEPALTIDEQWFTELLNYLISASLNVKWQAAVALEHLDEETIPRLAQAGCEALT FVIAATSIFDSASRRNQARKLLTTIREHGIYTHATILLEPPYESIARLIDVAATFSLNDVSFELMQTMRVGDDEQTIKRF ARQRYQEGQTRQRLIDRFGPVLGGLLWQLRVQHVDEDEELGG
Specific function: Unknown
COG id: COG1032
COG function: function code C; Fe-S oxidoreductase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40831; Mature: 40831
Theoretical pI: Translated: 6.24; Mature: 6.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKVALIALPGKQTNQMPPLTLAYVAAVLEQRRIIVRMYDHALDATGSWHDIRRRLQTFQP CEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCC QRVIVGGEDSRTIEQAVAQIHQSYPDILPLLVQRNGTDAPAAITGVLAWLDGVATVNQCL CEEEECCCCCHHHHHHHHHHHHHCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHC PNDVPFPARHLLSLEHYALRAPGGELQTPVVIGWHINGQWHMRQPRQIGQELRTLVEEAG CCCCCCCHHHHHHHHHHHEECCCCCCCCCEEEEEEECCEECCCCHHHHHHHHHHHHHHCC IRHVLFCEPALTIDEQWFTELLNYLISASLNVKWQAAVALEHLDEETIPRLAQAGCEALT CCEEEEECCCCCCCHHHHHHHHHHHHHCCCCCEEHHHHHHHHCCHHHHHHHHHHHHHHHH FVIAATSIFDSASRRNQARKLLTTIREHGIYTHATILLEPPYESIARLIDVAATFSLNDV HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHH SFELMQTMRVGDDEQTIKRFARQRYQEGQTRQRLIDRFGPVLGGLLWQLRVQHVDEDEEL HHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCC GG CC >Mature Secondary Structure MKVALIALPGKQTNQMPPLTLAYVAAVLEQRRIIVRMYDHALDATGSWHDIRRRLQTFQP CEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCC QRVIVGGEDSRTIEQAVAQIHQSYPDILPLLVQRNGTDAPAAITGVLAWLDGVATVNQCL CEEEECCCCCHHHHHHHHHHHHHCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHC PNDVPFPARHLLSLEHYALRAPGGELQTPVVIGWHINGQWHMRQPRQIGQELRTLVEEAG CCCCCCCHHHHHHHHHHHEECCCCCCCCCEEEEEEECCEECCCCHHHHHHHHHHHHHHCC IRHVLFCEPALTIDEQWFTELLNYLISASLNVKWQAAVALEHLDEETIPRLAQAGCEALT CCEEEEECCCCCCCHHHHHHHHHHHHHCCCCCEEHHHHHHHHCCHHHHHHHHHHHHHHHH FVIAATSIFDSASRRNQARKLLTTIREHGIYTHATILLEPPYESIARLIDVAATFSLNDV HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHH SFELMQTMRVGDDEQTIKRFARQRYQEGQTRQRLIDRFGPVLGGLLWQLRVQHVDEDEEL HHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCC GG CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA