| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is 222525116
Identifier: 222525116
GI number: 222525116
Start: 2342351
End: 2345074
Strand: Reverse
Name: 222525116
Synonym: Chy400_1854
Alternate gene names: NA
Gene position: 2345074-2342351 (Counterclockwise)
Preceding gene: 222525120
Following gene: 222525111
Centisome position: 44.51
GC content: 59.18
Gene sequence:
>2724_bases ATGGTGACTCTCGTGTACCAGACTTCGACCCGGCGGGTTGCGTACTGGCTGCGCCGGCTTTCAATACTCTTCTGCCTCAT GTTGCTGATGACTGCCTGGCCGGCACAATCCGGTGCTGCGCACGATGAGCCATCAGCAACTCTGGCAAATCTGGTTTGCT TCGATGCGACTGAGGACGCGGCTATTGATCGCTCGCCATCCTCCTCCCCCTGGCGACCACTGCGAAACGAGGTCAGTTTT ACCACGGCGGCTGCCCGCGTCTTTTCACCACCCCAGGCCATCTTTCTGGTCGAGGATGACGATGGCGACGGTGATGGTGG CATCGATGTTGATGCCTTCGGGCAACGATTTTCAATACCACCAACTACCGAACAGATAATTGGTTCATTACGGTACCGGA TTGTGCCGGATGCCCTCGGCCCAAACGATAGTGTGACCATTTCGCTCAATCTACCCGATGACCCTACACCTGCCGGACGT GTCTTTGCCGTGGATATTCCGCTCAGTGGCCGGGCCGATGGTAACTGGCGCAGCTTCACCTGGGCAGCCACCGACGTGGC ATCGCTGGTCGATCAAGGCGCTGCGCGGTTGCAGATCACGATGCGCGGCGTCAATGACGGTACCGCACTCGCGCTTTCGT TCGATGACATTGAAGCCCAGGTATGCACACGCACACTGGCGACCCTGGGTGGTCGGGTCAGCCAGCTCAACCGGGACACA GCCGATCTGAGCGATGTGCAGGTTCTTCTGGTACGCTCCGACACGAACGGTCAGACGGTTGTTGCCACCGCCGATGTAGC CCCTGCCGATGATGGGTTTCGCTATCAGTTCGATGTGCCGCCGCTCGCGGACGGAGAAAGGTATCAGGTCTGGTTTGTCA ATCAGCCGTTGAGTGGGAGTCGAGATCAGCGTCGTCTTGGCCTCCTGGCCGGTCCGGTTGTTAGCGAACTGGCCGCCGGT GAAGAGATTCTCGACCTCGACCTGGAGCTTAGTTCACCGCGCCTGCTTGATCCACAACCTGGTGCCCGCCTGGTGCTGCG CGAGGACAGTCCGGTGCGTCTCTCCATCGAACCGCGAGGCAGCGAAGACGAGTTGTATCAGATTTGTCTCTACGATCCGG TGGTGATTGTCCCGGAAACCGGCTTACCACCGCAATTGTGCAGTCCACTGCTCACCGCGGATGAACCGTACATTGATCTC GTGCCGGCCAGTTTTGCCACCTTCCCCCTGCGCTACGGCCATCCGTATCGCTGGTACGCTATCGTTCACGACAATCGCGG CACAGAGCAGTTGCCCGCCTACGGTTACAGCTTTGCCGAACGGACGATCACATTTCTGCCTGAACCTCCTTCGCTGCCGG TGCGACCGGTCGATGATGAGGGATTGCCGGATGGTCTGCCGTCGGCGAGCTGGACGGTGTTGATCTACGTTGCGGCTGAT AATGCACTCGGCGATCCATTGCGCACTAGTGCTGTTGCACGCCCGGATTTCGAACTAGAGCGCCTGCGCTCATTGGCGAC GACCTATCCCAATCTTTCGATTGTGACCTTCTACGACGGTTATGGGAGTACCGGTGGTCAGATGTGTGCCTTGCGTGGCA GTGCCGTTGATTGCCGGAACCGATTAGAGCCAAACAGTGCCGATCCGGCGACTCTGCGCGAATTTGTTAGATTTGGCCTG ACCGAATTTCCGGCTACTCGCACTATGCTGGTGCTCGTTGGCCCGGCTCACCCGGCACTCGGTTTTGGCAGTGATGAGTC GGTCGCGAATATACCGGCCATGACGATGGCCGATCTCGGTACGGCGCTGACCAATGCCACCACAGCCGCAGCGAAACGCC TCGATCTGATCCTGATGCAGGCCCCTCTCACGGCCAATCTGAACACAGCACTGGCCCTGGCCCCGGCGGCTGATTATCTG GTTGCACCACCCGGACAAATCTGGCGCACCGCCTGGCTCAACCGCGTGTTGAATCGGCTAAACGCGACTAACAACACGCC GCGGGAGGTTGCGATTGATCTGCCGGCATTGTACGGCAACGCCGTGCGGGCCGATGGTGTTTTGCGTGAATATGCGCTGA CGGCCCTTGACCTTGCGCGTGCTGATGAAGTGAAGGCGGCACGCGATGCGCTGGCGGTTGAATTAACACGTGTCCTCAAT GAGCGCGCCGCCATAATGCAATTGTTGCTGATGGATGTGCGTGCCGGCAGTACAGCCTATGATAGCTCAGGAAATGGGCT GATCAATGCAATGCGGGACTCACTTGGAGAGCGCTTCCCGGCACCGGAAGATGCCTTTATCGATCTCGGTGATTTTGCGA CAGCTCTGGCTAATGCACCAGCGCTACAGGCCGCCGATCTGGCGGCAGCCCGTACTGCGACCCTGAACCTGCGAAATGCC CTTGGTGGAAGTACACCACTGGTCATAGCCACCCGCCGCCTGGCAAACGGACAGGTCGGGCTACCAGAGTTACCCATCGG CGCTGGTCTGGCCGAATTGTTCCCTCACCACGCTCTCTTGGGCACCCAACCGCTGCTGGTCGAATATCTGCTGTATCGCG GCCAGAACGATGACTGGAGCGCCTTTGTTCGTCAATACCTGGCAACAGATCGACCAGTCGGCATTGGCGGCGTCACTGAT GTCCCGACCGGCGGCACGCCGTTCCCGCTCATTACCGGACTACCACTGGCGTATGATCGCTATCTACCCATCGTTGCCCG CTGA
Upstream 100 bases:
>100_bases GGAATCAGGTAATGTGTCCGCTACGATGTCACCAATAGCGAGAACGACTTTGAGGATACCGGGGTGATATGGTATATCGC CTGTAGTGGAGCAGCAACGC
Downstream 100 bases:
>100_bases CCATTGCACTAAACAGTGCGACACAGGGAGTCCTGCACGCTCTCTACAGAGGTAGGCGCAGGCGTTGACTGCACCTACCC TACTCTGTAGGATGGAATAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 907; Mature: 907
Protein sequence:
>907_residues MVTLVYQTSTRRVAYWLRRLSILFCLMLLMTAWPAQSGAAHDEPSATLANLVCFDATEDAAIDRSPSSSPWRPLRNEVSF TTAAARVFSPPQAIFLVEDDDGDGDGGIDVDAFGQRFSIPPTTEQIIGSLRYRIVPDALGPNDSVTISLNLPDDPTPAGR VFAVDIPLSGRADGNWRSFTWAATDVASLVDQGAARLQITMRGVNDGTALALSFDDIEAQVCTRTLATLGGRVSQLNRDT ADLSDVQVLLVRSDTNGQTVVATADVAPADDGFRYQFDVPPLADGERYQVWFVNQPLSGSRDQRRLGLLAGPVVSELAAG EEILDLDLELSSPRLLDPQPGARLVLREDSPVRLSIEPRGSEDELYQICLYDPVVIVPETGLPPQLCSPLLTADEPYIDL VPASFATFPLRYGHPYRWYAIVHDNRGTEQLPAYGYSFAERTITFLPEPPSLPVRPVDDEGLPDGLPSASWTVLIYVAAD NALGDPLRTSAVARPDFELERLRSLATTYPNLSIVTFYDGYGSTGGQMCALRGSAVDCRNRLEPNSADPATLREFVRFGL TEFPATRTMLVLVGPAHPALGFGSDESVANIPAMTMADLGTALTNATTAAAKRLDLILMQAPLTANLNTALALAPAADYL VAPPGQIWRTAWLNRVLNRLNATNNTPREVAIDLPALYGNAVRADGVLREYALTALDLARADEVKAARDALAVELTRVLN ERAAIMQLLLMDVRAGSTAYDSSGNGLINAMRDSLGERFPAPEDAFIDLGDFATALANAPALQAADLAAARTATLNLRNA LGGSTPLVIATRRLANGQVGLPELPIGAGLAELFPHHALLGTQPLLVEYLLYRGQNDDWSAFVRQYLATDRPVGIGGVTD VPTGGTPFPLITGLPLAYDRYLPIVAR
Sequences:
>Translated_907_residues MVTLVYQTSTRRVAYWLRRLSILFCLMLLMTAWPAQSGAAHDEPSATLANLVCFDATEDAAIDRSPSSSPWRPLRNEVSF TTAAARVFSPPQAIFLVEDDDGDGDGGIDVDAFGQRFSIPPTTEQIIGSLRYRIVPDALGPNDSVTISLNLPDDPTPAGR VFAVDIPLSGRADGNWRSFTWAATDVASLVDQGAARLQITMRGVNDGTALALSFDDIEAQVCTRTLATLGGRVSQLNRDT ADLSDVQVLLVRSDTNGQTVVATADVAPADDGFRYQFDVPPLADGERYQVWFVNQPLSGSRDQRRLGLLAGPVVSELAAG EEILDLDLELSSPRLLDPQPGARLVLREDSPVRLSIEPRGSEDELYQICLYDPVVIVPETGLPPQLCSPLLTADEPYIDL VPASFATFPLRYGHPYRWYAIVHDNRGTEQLPAYGYSFAERTITFLPEPPSLPVRPVDDEGLPDGLPSASWTVLIYVAAD NALGDPLRTSAVARPDFELERLRSLATTYPNLSIVTFYDGYGSTGGQMCALRGSAVDCRNRLEPNSADPATLREFVRFGL TEFPATRTMLVLVGPAHPALGFGSDESVANIPAMTMADLGTALTNATTAAAKRLDLILMQAPLTANLNTALALAPAADYL VAPPGQIWRTAWLNRVLNRLNATNNTPREVAIDLPALYGNAVRADGVLREYALTALDLARADEVKAARDALAVELTRVLN ERAAIMQLLLMDVRAGSTAYDSSGNGLINAMRDSLGERFPAPEDAFIDLGDFATALANAPALQAADLAAARTATLNLRNA LGGSTPLVIATRRLANGQVGLPELPIGAGLAELFPHHALLGTQPLLVEYLLYRGQNDDWSAFVRQYLATDRPVGIGGVTD VPTGGTPFPLITGLPLAYDRYLPIVAR >Mature_907_residues MVTLVYQTSTRRVAYWLRRLSILFCLMLLMTAWPAQSGAAHDEPSATLANLVCFDATEDAAIDRSPSSSPWRPLRNEVSF TTAAARVFSPPQAIFLVEDDDGDGDGGIDVDAFGQRFSIPPTTEQIIGSLRYRIVPDALGPNDSVTISLNLPDDPTPAGR VFAVDIPLSGRADGNWRSFTWAATDVASLVDQGAARLQITMRGVNDGTALALSFDDIEAQVCTRTLATLGGRVSQLNRDT ADLSDVQVLLVRSDTNGQTVVATADVAPADDGFRYQFDVPPLADGERYQVWFVNQPLSGSRDQRRLGLLAGPVVSELAAG EEILDLDLELSSPRLLDPQPGARLVLREDSPVRLSIEPRGSEDELYQICLYDPVVIVPETGLPPQLCSPLLTADEPYIDL VPASFATFPLRYGHPYRWYAIVHDNRGTEQLPAYGYSFAERTITFLPEPPSLPVRPVDDEGLPDGLPSASWTVLIYVAAD NALGDPLRTSAVARPDFELERLRSLATTYPNLSIVTFYDGYGSTGGQMCALRGSAVDCRNRLEPNSADPATLREFVRFGL TEFPATRTMLVLVGPAHPALGFGSDESVANIPAMTMADLGTALTNATTAAAKRLDLILMQAPLTANLNTALALAPAADYL VAPPGQIWRTAWLNRVLNRLNATNNTPREVAIDLPALYGNAVRADGVLREYALTALDLARADEVKAARDALAVELTRVLN ERAAIMQLLLMDVRAGSTAYDSSGNGLINAMRDSLGERFPAPEDAFIDLGDFATALANAPALQAADLAAARTATLNLRNA LGGSTPLVIATRRLANGQVGLPELPIGAGLAELFPHHALLGTQPLLVEYLLYRGQNDDWSAFVRQYLATDRPVGIGGVTD VPTGGTPFPLITGLPLAYDRYLPIVAR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 97635; Mature: 97635
Theoretical pI: Translated: 4.35; Mature: 4.35
Prosite motif: PS00237 G_PROTEIN_RECEP_F1_1 ; PS00308 LECTIN_LEGUME_ALPHA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVTLVYQTSTRRVAYWLRRLSILFCLMLLMTAWPAQSGAAHDEPSATLANLVCFDATEDA CEEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHEEEEEEECCCCCC AIDRSPSSSPWRPLRNEVSFTTAAARVFSPPQAIFLVEDDDGDGDGGIDVDAFGQRFSIP CCCCCCCCCCCCHHHHCCHHHHHHHHHCCCCCEEEEEECCCCCCCCCEEHHHCCCCCCCC PTTEQIIGSLRYRIVPDALGPNDSVTISLNLPDDPTPAGRVFAVDIPLSGRADGNWRSFT CCHHHHHHHHHEEEECCCCCCCCCEEEEEECCCCCCCCCEEEEEECCCCCCCCCCCEEEE WAATDVASLVDQGAARLQITMRGVNDGTALALSFDDIEAQVCTRTLATLGGRVSQLNRDT EHHHHHHHHHHCCCEEEEEEEEECCCCCEEEEEECHHHHHHHHHHHHHHCCHHHHHCCCC ADLSDVQVLLVRSDTNGQTVVATADVAPADDGFRYQFDVPPLADGERYQVWFVNQPLSGS CCCCCEEEEEEEECCCCCEEEEEECCCCCCCCCEEEECCCCCCCCCEEEEEEECCCCCCC RDQRRLGLLAGPVVSELAAGEEILDLDLELSSPRLLDPQPGARLVLREDSPVRLSIEPRG CCHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCCEEEEECCCCEEEEECCCC SEDELYQICLYDPVVIVPETGLPPQLCSPLLTADEPYIDLVPASFATFPLRYGHPYRWYA CCCCEEEEEEECCEEEEECCCCCHHHHCHHHCCCCCCEEEECCCHHHCCEECCCCEEEEE IVHDNRGTEQLPAYGYSFAERTITFLPEPPSLPVRPVDDEGLPDGLPSASWTVLIYVAAD EEECCCCCCCCCCCCCHHHCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEC NALGDPLRTSAVARPDFELERLRSLATTYPNLSIVTFYDGYGSTGGQMCALRGSAVDCRN CCCCCCHHHCCCCCCCHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCEEEECCCCHHHHH RLEPNSADPATLREFVRFGLTEFPATRTMLVLVGPAHPALGFGSDESVANIPAMTMADLG CCCCCCCCHHHHHHHHHHCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHH TALTNATTAAAKRLDLILMQAPLTANLNTALALAPAADYLVAPPGQIWRTAWLNRVLNRL HHHHHHHHHHHHHHEEEEEECCCCCCCCCEEEECCCCCEEECCCHHHHHHHHHHHHHHHH NATNNTPREVAIDLPALYGNAVRADGVLREYALTALDLARADEVKAARDALAVELTRVLN CCCCCCCCEEEEECHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ERAAIMQLLLMDVRAGSTAYDSSGNGLINAMRDSLGERFPAPEDAFIDLGDFATALANAP HHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCEEECHHHHHHHHCCC ALQAADLAAARTATLNLRNALGGSTPLVIATRRLANGQVGLPELPIGAGLAELFPHHALL CCHHHHHHHHHHEEEEHHHHCCCCCCEEEEEEECCCCCCCCCCCCCCCCHHHHCCCHHHH GTQPLLVEYLLYRGQNDDWSAFVRQYLATDRPVGIGGVTDVPTGGTPFPLITGLPLAYDR CCCHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHCCCHHHHC YLPIVAR CCCEECC >Mature Secondary Structure MVTLVYQTSTRRVAYWLRRLSILFCLMLLMTAWPAQSGAAHDEPSATLANLVCFDATEDA CEEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHEEEEEEECCCCCC AIDRSPSSSPWRPLRNEVSFTTAAARVFSPPQAIFLVEDDDGDGDGGIDVDAFGQRFSIP CCCCCCCCCCCCHHHHCCHHHHHHHHHCCCCCEEEEEECCCCCCCCCEEHHHCCCCCCCC PTTEQIIGSLRYRIVPDALGPNDSVTISLNLPDDPTPAGRVFAVDIPLSGRADGNWRSFT CCHHHHHHHHHEEEECCCCCCCCCEEEEEECCCCCCCCCEEEEEECCCCCCCCCCCEEEE WAATDVASLVDQGAARLQITMRGVNDGTALALSFDDIEAQVCTRTLATLGGRVSQLNRDT EHHHHHHHHHHCCCEEEEEEEEECCCCCEEEEEECHHHHHHHHHHHHHHCCHHHHHCCCC ADLSDVQVLLVRSDTNGQTVVATADVAPADDGFRYQFDVPPLADGERYQVWFVNQPLSGS CCCCCEEEEEEEECCCCCEEEEEECCCCCCCCCEEEECCCCCCCCCEEEEEEECCCCCCC RDQRRLGLLAGPVVSELAAGEEILDLDLELSSPRLLDPQPGARLVLREDSPVRLSIEPRG CCHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCCEEEEECCCCEEEEECCCC SEDELYQICLYDPVVIVPETGLPPQLCSPLLTADEPYIDLVPASFATFPLRYGHPYRWYA CCCCEEEEEEECCEEEEECCCCCHHHHCHHHCCCCCCEEEECCCHHHCCEECCCCEEEEE IVHDNRGTEQLPAYGYSFAERTITFLPEPPSLPVRPVDDEGLPDGLPSASWTVLIYVAAD EEECCCCCCCCCCCCCHHHCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEC NALGDPLRTSAVARPDFELERLRSLATTYPNLSIVTFYDGYGSTGGQMCALRGSAVDCRN CCCCCCHHHCCCCCCCHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCEEEECCCCHHHHH RLEPNSADPATLREFVRFGLTEFPATRTMLVLVGPAHPALGFGSDESVANIPAMTMADLG CCCCCCCCHHHHHHHHHHCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHH TALTNATTAAAKRLDLILMQAPLTANLNTALALAPAADYLVAPPGQIWRTAWLNRVLNRL HHHHHHHHHHHHHHEEEEEECCCCCCCCCEEEECCCCCEEECCCHHHHHHHHHHHHHHHH NATNNTPREVAIDLPALYGNAVRADGVLREYALTALDLARADEVKAARDALAVELTRVLN CCCCCCCCEEEEECHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ERAAIMQLLLMDVRAGSTAYDSSGNGLINAMRDSLGERFPAPEDAFIDLGDFATALANAP HHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCEEECHHHHHHHHCCC ALQAADLAAARTATLNLRNALGGSTPLVIATRRLANGQVGLPELPIGAGLAELFPHHALL CCHHHHHHHHHHEEEEHHHHCCCCCCEEEEEEECCCCCCCCCCCCCCCCHHHHCCCHHHH GTQPLLVEYLLYRGQNDDWSAFVRQYLATDRPVGIGGVTDVPTGGTPFPLITGLPLAYDR CCCHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHCCCHHHHC YLPIVAR CCCEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA