| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is 222525120
Identifier: 222525120
GI number: 222525120
Start: 2348832
End: 2349380
Strand: Reverse
Name: 222525120
Synonym: Chy400_1858
Alternate gene names: NA
Gene position: 2349380-2348832 (Counterclockwise)
Preceding gene: 222525121
Following gene: 222525116
Centisome position: 44.59
GC content: 53.37
Gene sequence:
>549_bases ATGTCACTCATCGCCGGAAATCTTGCAATCGTCCAACGTTTACTCGACGGCGATCAGATAGCCTGGGCAGTTATCGGTGG AGCAGCAGCTCATGTGTATGGTGACCGCCGTCCTCTGAATGACGTAGATATTTTGGTGCAACGACAGGCATTGTCGCGGA TCGTCAATCTATTGCAGCAATCCCATAAAGCGGTGCAATCTGATGGTTCGCGCGTGATCTGGCGTGGTATCAAAGTCTTT GAGGACCTTAGCGTGCGGCGATCCGGAACCAGTCATCCATTCTGGCTTGACGATCTCATGCAGGAACGACGGCGTCGTGC GCCACTCCTCGGTGCCCAGGTATTTCTGGCTGCGCCCGAAGATATTGTGGCCCACAAATTGTTATTACAGCGTGGGCCTG AACAGGGTAAGCACGATACGCAGGATGCGGCTGGGATCATCCGGCGTCACCAGCTTGATATAGATTATCTGATTATGCGT CTCCAACGCATGAACGCACTCGATATCGTTCGCCCCCGTCTCCTCGATTTCGGGATTACCATACCGTAG
Upstream 100 bases:
>100_bases TCGGCGCAATCGCTTCGATGCACAGGTTGAGTTTTACGAGATGGAATTAACCCGCGAGGCGTGGCTAGCCGCCGGTGGTG CGCTTATTTAAGAGGGAATC
Downstream 100 bases:
>100_bases CATCGAGATGTCAGTTCAAACGAGAAGAGGCGGTATGGCGTAACCATACCGCCTCTTCGCCTTTGTCGAGGGTGTCCTTA GTTCCTGTTCAACCCCCAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 182; Mature: 181
Protein sequence:
>182_residues MSLIAGNLAIVQRLLDGDQIAWAVIGGAAAHVYGDRRPLNDVDILVQRQALSRIVNLLQQSHKAVQSDGSRVIWRGIKVF EDLSVRRSGTSHPFWLDDLMQERRRRAPLLGAQVFLAAPEDIVAHKLLLQRGPEQGKHDTQDAAGIIRRHQLDIDYLIMR LQRMNALDIVRPRLLDFGITIP
Sequences:
>Translated_182_residues MSLIAGNLAIVQRLLDGDQIAWAVIGGAAAHVYGDRRPLNDVDILVQRQALSRIVNLLQQSHKAVQSDGSRVIWRGIKVF EDLSVRRSGTSHPFWLDDLMQERRRRAPLLGAQVFLAAPEDIVAHKLLLQRGPEQGKHDTQDAAGIIRRHQLDIDYLIMR LQRMNALDIVRPRLLDFGITIP >Mature_181_residues SLIAGNLAIVQRLLDGDQIAWAVIGGAAAHVYGDRRPLNDVDILVQRQALSRIVNLLQQSHKAVQSDGSRVIWRGIKVFE DLSVRRSGTSHPFWLDDLMQERRRRAPLLGAQVFLAAPEDIVAHKLLLQRGPEQGKHDTQDAAGIIRRHQLDIDYLIMRL QRMNALDIVRPRLLDFGITIP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20529; Mature: 20398
Theoretical pI: Translated: 10.51; Mature: 10.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLIAGNLAIVQRLLDGDQIAWAVIGGAAAHVYGDRRPLNDVDILVQRQALSRIVNLLQQ CCCCHHHHHHHHHHHCCCCEEHHHHCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHH SHKAVQSDGSRVIWRGIKVFEDLSVRRSGTSHPFWLDDLMQERRRRAPLLGAQVFLAAPE HHHHHHCCCCEEHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCHHHEEECCH DIVAHKLLLQRGPEQGKHDTQDAAGIIRRHQLDIDYLIMRLQRMNALDIVRPRLLDFGIT HHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHCCCC IP CC >Mature Secondary Structure SLIAGNLAIVQRLLDGDQIAWAVIGGAAAHVYGDRRPLNDVDILVQRQALSRIVNLLQQ CCCHHHHHHHHHHHCCCCEEHHHHCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHH SHKAVQSDGSRVIWRGIKVFEDLSVRRSGTSHPFWLDDLMQERRRRAPLLGAQVFLAAPE HHHHHHCCCCEEHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCHHHEEECCH DIVAHKLLLQRGPEQGKHDTQDAAGIIRRHQLDIDYLIMRLQRMNALDIVRPRLLDFGIT HHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHCCCC IP CC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA