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The map label for this gene is rfbU [H]

Identifier: 222525111

GI number: 222525111

Start: 2335183

End: 2336310

Strand: Reverse

Name: rfbU [H]

Synonym: Chy400_1849

Alternate gene names: 222525111

Gene position: 2336310-2335183 (Counterclockwise)

Preceding gene: 222525116

Following gene: 222525108

Centisome position: 44.34

GC content: 59.49

Gene sequence:

>1128_bases
ATGCAATCACTGCGGATCGGCTTTGATGCCCGTTATATCGGCGACCATTTTCCCGGCATTGGTCGCTATATCACTGCCCT
GCTACCGGAGCTGAGTTCTCTCAGTCGCCAACATCATCTGTTTGTGCTGGTAAATGCCGATCAAGCACTGCCACCGTTGA
ACGGCACGAGTGTCGAGCGGATTACTGTGCGGAGTACACCCTTTGCGCTCACCCAGCAGCTCGAACTACCGTTACTGGCA
ACCCGGTTACAGCTCGATGTACTCCATTCCCCTTACATCGTGAAGCCGTATCTCCTCCCCTGTCCTTCGGTTGTCACCAT
TTACGATGTCTTGCCTTTGCGCTACCCGACCACGCTTAGCCCACGCGGACGACGCTTCTACCGGCTGGCCTTGCGCCTTG
CTGCGCGGAGTGCGCGCAGCCTGATCACTATTTCGACTGTTTCGCGCGACGATCTTGCGTTTCATCTGCGCATTCCTCGC
GAACGGATTGTGGTCACACCGCTGGCTGCGGCGCCTTCGTTTACTCCCCAGCCGGTCGATGAGATCACCGATATGCGCTT
GCGGTATGGGCTTCCCCGCCATTATGTGTTGTACGTCGGCTCAAACAAACCGCACAAGAACATTGACCGGCTGCTGCGAG
CCTGGGAGCGCGTCATCCCCGAACTGCCGGCGTCGCTCACCGATACGGTACTGGTCATTGCCGGTAAGTTCGATCCGCGC
TATCCACTACCTGCAACGATTGCGAACGAGCGCGGTTTGAGCGAGCGGGTGAAGATTCTTCCTGGGGTGAGTGACGATGA
CCTGCCGGCCCTGTACAGCGGTGCCTTACTGTTTGTATTTCCGTCATCGTATGAAGGATTTGGCCTGCCACCGCTAGAGG
CCATGGCTTGCGGCACGCCGGTGGTCTGTGCGTATGCCGGCAGTTTACCGGAAGTCGTTGGAGAAGCGGCGCTCACCGTC
GATCCGCACAACATGCACGAGATCGCCGAGGGCATCTTGCGCGTGTTGCGCTCGCCCGATCTGGCCCGCTTTCTGCGCGA
GCGCGGGCAGCGTCAGGCGGCGCGCTTTTCGTGGCGAGCCACGGCCCAGGCCACGCTGGATGTGTACGAACACGTCGCGG
CCAGATGA

Upstream 100 bases:

>100_bases
GACACTGCTGTGCCAGATCACACCACCCTCGATACCAGACGCACAGAATATAGCACGCACCCTGTTTTTACTCTCCTCAT
CCCGGCTATAATGAACACTG

Downstream 100 bases:

>100_bases
CAGGCTCAAATGAAGGTGAGTCAGGATGGTATGCCGTGTGCGAACAGAGAGAAACACAAACTGGTGATGTACCCTGTTCG
CACACGGCACCTTACCTTGC

Product: group 1 glycosyl transferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 375; Mature: 375

Protein sequence:

>375_residues
MQSLRIGFDARYIGDHFPGIGRYITALLPELSSLSRQHHLFVLVNADQALPPLNGTSVERITVRSTPFALTQQLELPLLA
TRLQLDVLHSPYIVKPYLLPCPSVVTIYDVLPLRYPTTLSPRGRRFYRLALRLAARSARSLITISTVSRDDLAFHLRIPR
ERIVVTPLAAAPSFTPQPVDEITDMRLRYGLPRHYVLYVGSNKPHKNIDRLLRAWERVIPELPASLTDTVLVIAGKFDPR
YPLPATIANERGLSERVKILPGVSDDDLPALYSGALLFVFPSSYEGFGLPPLEAMACGTPVVCAYAGSLPEVVGEAALTV
DPHNMHEIAEGILRVLRSPDLARFLRERGQRQAARFSWRATAQATLDVYEHVAAR

Sequences:

>Translated_375_residues
MQSLRIGFDARYIGDHFPGIGRYITALLPELSSLSRQHHLFVLVNADQALPPLNGTSVERITVRSTPFALTQQLELPLLA
TRLQLDVLHSPYIVKPYLLPCPSVVTIYDVLPLRYPTTLSPRGRRFYRLALRLAARSARSLITISTVSRDDLAFHLRIPR
ERIVVTPLAAAPSFTPQPVDEITDMRLRYGLPRHYVLYVGSNKPHKNIDRLLRAWERVIPELPASLTDTVLVIAGKFDPR
YPLPATIANERGLSERVKILPGVSDDDLPALYSGALLFVFPSSYEGFGLPPLEAMACGTPVVCAYAGSLPEVVGEAALTV
DPHNMHEIAEGILRVLRSPDLARFLRERGQRQAARFSWRATAQATLDVYEHVAAR
>Mature_375_residues
MQSLRIGFDARYIGDHFPGIGRYITALLPELSSLSRQHHLFVLVNADQALPPLNGTSVERITVRSTPFALTQQLELPLLA
TRLQLDVLHSPYIVKPYLLPCPSVVTIYDVLPLRYPTTLSPRGRRFYRLALRLAARSARSLITISTVSRDDLAFHLRIPR
ERIVVTPLAAAPSFTPQPVDEITDMRLRYGLPRHYVLYVGSNKPHKNIDRLLRAWERVIPELPASLTDTVLVIAGKFDPR
YPLPATIANERGLSERVKILPGVSDDDLPALYSGALLFVFPSSYEGFGLPPLEAMACGTPVVCAYAGSLPEVVGEAALTV
DPHNMHEIAEGILRVLRSPDLARFLRERGQRQAARFSWRATAQATLDVYEHVAAR

Specific function: Involved In The Addition Of The First Glucose Residue To The Lipopolysaccharide Core. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 1 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001296 [H]

Pfam domain/function: PF00534 Glycos_transf_1 [H]

EC number: NA

Molecular weight: Translated: 41790; Mature: 41790

Theoretical pI: Translated: 9.52; Mature: 9.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQSLRIGFDARYIGDHFPGIGRYITALLPELSSLSRQHHLFVLVNADQALPPLNGTSVER
CCCEEECCCCEECCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCEEE
ITVRSTPFALTQQLELPLLATRLQLDVLHSPYIVKPYLLPCPSVVTIYDVLPLRYPTTLS
EEEECCCHHHHHHCCCCHHHHHHHHHHHCCCEEECCEECCCCCHHHHHHHHCCCCCCCCC
PRGRRFYRLALRLAARSARSLITISTVSRDDLAFHLRIPRERIVVTPLAAAPSFTPQPVD
CCCHHHHHHHHHHHHHHHCCEEEEEEECCCCEEEEEECCCCEEEEEECCCCCCCCCCCHH
EITDMRLRYGLPRHYVLYVGSNKPHKNIDRLLRAWERVIPELPASLTDTVLVIAGKFDPR
HHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCC
YPLPATIANERGLSERVKILPGVSDDDLPALYSGALLFVFPSSYEGFGLPPLEAMACGTP
CCCCCCCCCCCCCHHHHHCCCCCCCCCCCHHHCCEEEEEECCCCCCCCCCCHHHHHCCCC
VVCAYAGSLPEVVGEAALTVDPHNMHEIAEGILRVLRSPDLARFLRERGQRQAARFSWRA
EEEEECCCCHHHHCCCEEEECCCCHHHHHHHHHHHHCCCCHHHHHHHHCHHHHHHHHHHH
TAQATLDVYEHVAAR
HHHHHHHHHHHHHCC
>Mature Secondary Structure
MQSLRIGFDARYIGDHFPGIGRYITALLPELSSLSRQHHLFVLVNADQALPPLNGTSVER
CCCEEECCCCEECCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCEEE
ITVRSTPFALTQQLELPLLATRLQLDVLHSPYIVKPYLLPCPSVVTIYDVLPLRYPTTLS
EEEECCCHHHHHHCCCCHHHHHHHHHHHCCCEEECCEECCCCCHHHHHHHHCCCCCCCCC
PRGRRFYRLALRLAARSARSLITISTVSRDDLAFHLRIPRERIVVTPLAAAPSFTPQPVD
CCCHHHHHHHHHHHHHHHCCEEEEEEECCCCEEEEEECCCCEEEEEECCCCCCCCCCCHH
EITDMRLRYGLPRHYVLYVGSNKPHKNIDRLLRAWERVIPELPASLTDTVLVIAGKFDPR
HHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCC
YPLPATIANERGLSERVKILPGVSDDDLPALYSGALLFVFPSSYEGFGLPPLEAMACGTP
CCCCCCCCCCCCCHHHHHCCCCCCCCCCCHHHCCEEEEEECCCCCCCCCCCHHHHHCCCC
VVCAYAGSLPEVVGEAALTVDPHNMHEIAEGILRVLRSPDLARFLRERGQRQAARFSWRA
EEEEECCCCHHHHCCCEEEECCCCHHHHHHHHHHHHCCCCHHHHHHHHCHHHHHHHHHHH
TAQATLDVYEHVAAR
HHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Glycosyltransferases; Hexosyltransferases [C]

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 1710759; 11677609 [H]