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The map label for this gene is sgcX [C]

Identifier: 222525100

GI number: 222525100

Start: 2327231

End: 2328295

Strand: Direct

Name: sgcX [C]

Synonym: Chy400_1838

Alternate gene names: 222525100

Gene position: 2327231-2328295 (Clockwise)

Preceding gene: 222525090

Following gene: 222525101

Centisome position: 44.17

GC content: 56.62

Gene sequence:

>1065_bases
ATGGAACTTGCACAAATCTCCTTTCTGAAACGGCTGCTCGCTACGCCTGGCCCTTCGGGTGACGAAGATCAGGCAGCGCG
GGTATGGCGGGCCGAAGCGCGCACGTTTGCCGATCAGGTCTATAGTGATGTGCTAGGCAACAGCTTTGCGGTGTTGGAAG
GCAGTGGGCCACGGATTCTGCTGGCTGGTCATATCGATGAGATTGGCTTGATGATCAGCCATATCGACGATCAAGGCTTT
CTGTTCTTTAGCCCGATTGGTGGTTGGGATGCGCAGGTTCTGGTTGGTCAGCGTGTGCGCTTGCTGGGCAAGAACGGTGA
CGTGATAGGGGTGATCGGGAAGAAGCCGATTCACCTGCTCAAGCCCGACGAACGCAATCAGGCCACGAAAATCGAACAGA
TGTGGATTGATATTGGGGCGACGAGCAAGAGCGAAGCCAGTGAACTGGTTCAGGTCGGCGATGTTGGCGTCATTGACGCA
CCGGTCTACGAGCTACCGGGGGGGCGCATTGTCAGTCGCTCTATCGACAACCGGATCGGTGCCTTTACCGTTCTGGAAGC
CTTGCGTCTACTCAGCCAGAATCGGCCCAACGCTCACGTGGCGGCTGTTGCCACAACTCAGGAAGAGATCACCTTTGGCG
GAGCAACGACGGCGGCGTTCAGTTTCGATCCACAGATTGCGCTGGTGGTAGATGTCACTTTTGCTACCGACCACCCCGAC
TCGGATCAGCGCCAGTGGAACGTGGTCAAACTGGGTGGTGGCCCGGTGTTGTCACGCGGCTCAGCCAACAGTGGTCGGGT
TTTTCGGCGGCTGGTTGAGCTGGCCGAGCGCGAAGCGATCCCGTACAGTGTGCAAATCTCGCCACGGTACACCGGTACCG
ATGCCGACGCGATCCATCATGTGCGAGGAGGTATTGCCAGTGCCGTCATCTCTATCCCCAACCGCTATATGCATTCGCCG
AACGAGATGATTGCATTGCACGACGTGGAGTGCGCAGTGCGCCTGATCGCCGCTTTTGTGCATTCAGTCAGTAATGTGAA
CGAATTTATTCCACAAGATGAATAA

Upstream 100 bases:

>100_bases
GGATGCATTCGCAGGTTGTGGGTCAAAAACCAATAACACTAATGATGCGTTATACTAGACACAGGTACAGGCAACCCTGT
TTTATCTACGAGAAGGACGT

Downstream 100 bases:

>100_bases
AAATTATAACGTATCAGCTATGGCACCGTGGTACAATAGGGGCTGTCGCGCCGGCGTTGTCGCGACCGGCCAGCGTTGGC
CGATTCTACTCATCGTTGAG

Product: peptidase M42 family protein

Products: D-glucose; GDP

Alternate protein names: NA

Number of amino acids: Translated: 354; Mature: 354

Protein sequence:

>354_residues
MELAQISFLKRLLATPGPSGDEDQAARVWRAEARTFADQVYSDVLGNSFAVLEGSGPRILLAGHIDEIGLMISHIDDQGF
LFFSPIGGWDAQVLVGQRVRLLGKNGDVIGVIGKKPIHLLKPDERNQATKIEQMWIDIGATSKSEASELVQVGDVGVIDA
PVYELPGGRIVSRSIDNRIGAFTVLEALRLLSQNRPNAHVAAVATTQEEITFGGATTAAFSFDPQIALVVDVTFATDHPD
SDQRQWNVVKLGGGPVLSRGSANSGRVFRRLVELAEREAIPYSVQISPRYTGTDADAIHHVRGGIASAVISIPNRYMHSP
NEMIALHDVECAVRLIAAFVHSVSNVNEFIPQDE

Sequences:

>Translated_354_residues
MELAQISFLKRLLATPGPSGDEDQAARVWRAEARTFADQVYSDVLGNSFAVLEGSGPRILLAGHIDEIGLMISHIDDQGF
LFFSPIGGWDAQVLVGQRVRLLGKNGDVIGVIGKKPIHLLKPDERNQATKIEQMWIDIGATSKSEASELVQVGDVGVIDA
PVYELPGGRIVSRSIDNRIGAFTVLEALRLLSQNRPNAHVAAVATTQEEITFGGATTAAFSFDPQIALVVDVTFATDHPD
SDQRQWNVVKLGGGPVLSRGSANSGRVFRRLVELAEREAIPYSVQISPRYTGTDADAIHHVRGGIASAVISIPNRYMHSP
NEMIALHDVECAVRLIAAFVHSVSNVNEFIPQDE
>Mature_354_residues
MELAQISFLKRLLATPGPSGDEDQAARVWRAEARTFADQVYSDVLGNSFAVLEGSGPRILLAGHIDEIGLMISHIDDQGF
LFFSPIGGWDAQVLVGQRVRLLGKNGDVIGVIGKKPIHLLKPDERNQATKIEQMWIDIGATSKSEASELVQVGDVGVIDA
PVYELPGGRIVSRSIDNRIGAFTVLEALRLLSQNRPNAHVAAVATTQEEITFGGATTAAFSFDPQIALVVDVTFATDHPD
SDQRQWNVVKLGGGPVLSRGSANSGRVFRRLVELAEREAIPYSVQISPRYTGTDADAIHHVRGGIASAVISIPNRYMHSP
NEMIALHDVECAVRLIAAFVHSVSNVNEFIPQDE

Specific function: Unknown

COG id: COG1363

COG function: function code G; Cellulase M and related proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M42 family [H]

Homologues:

Organism=Escherichia coli, GI87082417, Length=335, Percent_Identity=31.9402985074627, Blast_Score=158, Evalue=5e-40,
Organism=Escherichia coli, GI1790332, Length=353, Percent_Identity=30.028328611898, Blast_Score=158, Evalue=6e-40,
Organism=Escherichia coli, GI1788727, Length=347, Percent_Identity=25.9365994236311, Blast_Score=99, Evalue=4e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008007 [H]

Pfam domain/function: PF05343 Peptidase_M42 [H]

EC number: 3.2.1.4

Molecular weight: Translated: 38315; Mature: 38315

Theoretical pI: Translated: 5.22; Mature: 5.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MELAQISFLKRLLATPGPSGDEDQAARVWRAEARTFADQVYSDVLGNSFAVLEGSGPRIL
CCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCEEE
LAGHIDEIGLMISHIDDQGFLFFSPIGGWDAQVLVGQRVRLLGKNGDVIGVIGKKPIHLL
EEECCHHHHHEEEEECCCCCEEEECCCCCCCEEHHCCCEEEECCCCCEEEEECCCCEEEE
KPDERNQATKIEQMWIDIGATSKSEASELVQVGDVGVIDAPVYELPGGRIVSRSIDNRIG
CCCCCCHHHHHHHHEEECCCCCHHHHHHHHHHCCCCEECCCCEECCCCEEEHHHHHHHHH
AFTVLEALRLLSQNRPNAHVAAVATTQEEITFGGATTAAFSFDPQIALVVDVTFATDHPD
HHHHHHHHHHHHCCCCCCEEEEEEECHHHEEECCCEEEEEECCCCEEEEEEEEEECCCCC
SDQRQWNVVKLGGGPVLSRGSANSGRVFRRLVELAEREAIPYSVQISPRYTGTDADAIHH
CCCCEEEEEEECCCCEEECCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHH
VRGGIASAVISIPNRYMHSPNEMIALHDVECAVRLIAAFVHSVSNVNEFIPQDE
HHHHHHHHHHHCCHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MELAQISFLKRLLATPGPSGDEDQAARVWRAEARTFADQVYSDVLGNSFAVLEGSGPRIL
CCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCEEE
LAGHIDEIGLMISHIDDQGFLFFSPIGGWDAQVLVGQRVRLLGKNGDVIGVIGKKPIHLL
EEECCHHHHHEEEEECCCCCEEEECCCCCCCEEHHCCCEEEECCCCCEEEEECCCCEEEE
KPDERNQATKIEQMWIDIGATSKSEASELVQVGDVGVIDAPVYELPGGRIVSRSIDNRIG
CCCCCCHHHHHHHHEEECCCCCHHHHHHHHHHCCCCEECCCCEECCCCEEEHHHHHHHHH
AFTVLEALRLLSQNRPNAHVAAVATTQEEITFGGATTAAFSFDPQIALVVDVTFATDHPD
HHHHHHHHHHHHCCCCCCEEEEEEECHHHEEECCCEEEEEECCCCEEEEEEEEEECCCCC
SDQRQWNVVKLGGGPVLSRGSANSGRVFRRLVELAEREAIPYSVQISPRYTGTDADAIHH
CCCCEEEEEEECCCCEEECCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHH
VRGGIASAVISIPNRYMHSPNEMIALHDVECAVRLIAAFVHSVSNVNEFIPQDE
HHHHHHHHHHHCCHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: GDPglucose; H2O

Specific reaction: GDP-glucose + H2O = D-glucose + GDP

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]