| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is msrA [H]
Identifier: 222525065
GI number: 222525065
Start: 2280140
End: 2280685
Strand: Direct
Name: msrA [H]
Synonym: Chy400_1802
Alternate gene names: 222525065
Gene position: 2280140-2280685 (Clockwise)
Preceding gene: 222525064
Following gene: 222525068
Centisome position: 43.28
GC content: 54.95
Gene sequence:
>546_bases ATGCCTCTGGAGACAGCTACGCTGGCTGGTGGATGTTTCTGGTGTCTGGAAGCGGTGTACGATCAGGTGAGCGGCGTGAA GGACGTGGTGTCGGGATATACCGGGGGGTATGTGCCCAACCCGACGTATCGCCGGGTGTGTGATGGCAATACCGGCCACG CGGAAGCGGTACAAATCCAGTTTGATCCCGAACAGATCAGCTATCGCGAATTGCTGGAAATTTTCTTCAGTATTCACGAT CCGACGACGCTGAACCGACAGGGAGCTGATGTCGGCACACAATACCGTTCAGCCATCTTCTACCACTCTGAGGAGCAGCG TCAGGTGGCCGAGCAACTTGTGCGTGAGCTGACCGAACAACAGGTATTTCGCGATCCGATTGTGACGCAGATCGTCCCGG CTACCACTTTTTATCCGGCTGAGGAGTATCACCAGGAGTATTTTGCCCGCAATCCCTATCAGCCCTATTGTCAGTTTGTG GTGGCCCCGAAAGTGGCGAAGTTTCAGAAACTCTTTGCCCATCGGGTTGCCGGTGAGAAGAGCTGA
Upstream 100 bases:
>100_bases ACAATCCGCTGTAGCACTCTTTGCCCGAAAACCCGCCATCCATCGCCAAACTGCGGTAGACTACAAAGAGGAAGCGATTA CGTAGACAAGGAGATTCGGT
Downstream 100 bases:
>100_bases TCGAAGGGGGGCGAACACTATCGCTCGCCCCCTACCGGGTGATCACCACACCTCTTCAAGCATAGCAAGTAACTCTTCAG GCGTTGCCGGACGGGGATTG
Product: peptide methionine sulfoxide reductase
Products: NA
Alternate protein names: Protein-methionine-S-oxide reductase; Peptide-methionine (S)-S-oxide reductase; Peptide Met(O) reductase [H]
Number of amino acids: Translated: 181; Mature: 180
Protein sequence:
>181_residues MPLETATLAGGCFWCLEAVYDQVSGVKDVVSGYTGGYVPNPTYRRVCDGNTGHAEAVQIQFDPEQISYRELLEIFFSIHD PTTLNRQGADVGTQYRSAIFYHSEEQRQVAEQLVRELTEQQVFRDPIVTQIVPATTFYPAEEYHQEYFARNPYQPYCQFV VAPKVAKFQKLFAHRVAGEKS
Sequences:
>Translated_181_residues MPLETATLAGGCFWCLEAVYDQVSGVKDVVSGYTGGYVPNPTYRRVCDGNTGHAEAVQIQFDPEQISYRELLEIFFSIHD PTTLNRQGADVGTQYRSAIFYHSEEQRQVAEQLVRELTEQQVFRDPIVTQIVPATTFYPAEEYHQEYFARNPYQPYCQFV VAPKVAKFQKLFAHRVAGEKS >Mature_180_residues PLETATLAGGCFWCLEAVYDQVSGVKDVVSGYTGGYVPNPTYRRVCDGNTGHAEAVQIQFDPEQISYRELLEIFFSIHDP TTLNRQGADVGTQYRSAIFYHSEEQRQVAEQLVRELTEQQVFRDPIVTQIVPATTFYPAEEYHQEYFARNPYQPYCQFVV APKVAKFQKLFAHRVAGEKS
Specific function: Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine [H]
COG id: COG0225
COG function: function code O; Peptide methionine sulfoxide reductase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the msrA Met sulfoxide reductase family [H]
Homologues:
Organism=Homo sapiens, GI6912516, Length=158, Percent_Identity=44.3037974683544, Blast_Score=132, Evalue=1e-31, Organism=Homo sapiens, GI208609995, Length=158, Percent_Identity=44.3037974683544, Blast_Score=132, Evalue=1e-31, Organism=Homo sapiens, GI208609993, Length=111, Percent_Identity=46.8468468468468, Blast_Score=95, Evalue=4e-20, Organism=Escherichia coli, GI1790665, Length=153, Percent_Identity=49.0196078431373, Blast_Score=149, Evalue=7e-38, Organism=Caenorhabditis elegans, GI17533973, Length=148, Percent_Identity=36.4864864864865, Blast_Score=94, Evalue=3e-20, Organism=Saccharomyces cerevisiae, GI6320881, Length=154, Percent_Identity=42.2077922077922, Blast_Score=120, Evalue=2e-28, Organism=Drosophila melanogaster, GI24664627, Length=166, Percent_Identity=39.1566265060241, Blast_Score=107, Evalue=4e-24, Organism=Drosophila melanogaster, GI45553131, Length=160, Percent_Identity=38.75, Blast_Score=102, Evalue=1e-22, Organism=Drosophila melanogaster, GI24664631, Length=166, Percent_Identity=37.3493975903614, Blast_Score=97, Evalue=8e-21,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002569 [H]
Pfam domain/function: PF01625 PMSR [H]
EC number: =1.8.4.11 [H]
Molecular weight: Translated: 20642; Mature: 20511
Theoretical pI: Translated: 5.02; Mature: 5.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPLETATLAGGCFWCLEAVYDQVSGVKDVVSGYTGGYVPNPTYRRVCDGNTGHAEAVQIQ CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHCCCCCCCCEEEEEE FDPEQISYRELLEIFFSIHDPTTLNRQGADVGTQYRSAIFYHSEEQRQVAEQLVRELTEQ ECHHHCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH QVFRDPIVTQIVPATTFYPAEEYHQEYFARNPYQPYCQFVVAPKVAKFQKLFAHRVAGEK HHHHCCHHHHHHCCCCCCCHHHHHHHHHHCCCCCHHHHHHHCHHHHHHHHHHHHHHCCCC S C >Mature Secondary Structure PLETATLAGGCFWCLEAVYDQVSGVKDVVSGYTGGYVPNPTYRRVCDGNTGHAEAVQIQ CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHCCCCCCCCEEEEEE FDPEQISYRELLEIFFSIHDPTTLNRQGADVGTQYRSAIFYHSEEQRQVAEQLVRELTEQ ECHHHCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH QVFRDPIVTQIVPATTFYPAEEYHQEYFARNPYQPYCQFVVAPKVAKFQKLFAHRVAGEK HHHHCCHHHHHHCCCCCCCHHHHHHHHHHCCCCCHHHHHHHCHHHHHHHHHHHHHHCCCC S C
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA