| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
Click here to switch to the map view.
The map label for this gene is cheW [H]
Identifier: 222525068
GI number: 222525068
Start: 2282984
End: 2283445
Strand: Direct
Name: cheW [H]
Synonym: Chy400_1805
Alternate gene names: 222525068
Gene position: 2282984-2283445 (Clockwise)
Preceding gene: 222525065
Following gene: 222525069
Centisome position: 43.33
GC content: 56.93
Gene sequence:
>462_bases ATGCAATCATTATCGGGCCAGTCTCAAACCTCTGTATATCTGTATGTGCGTCTGGCAGCCGAGCATGTTGCTCTGGTCGG CACGGCGGTGCGAGAGATTATGCGCTGGCGGACACCAACACCGGTTCCCGGTGCACCACCAACCATTCCCGGTCTGATCA ATCAACGAGGGCAGATTCTGCCGGTGATCGATGCGCGTCTGCTTCTAGGCCTGCCGGCGGCGTCTCCTGATCGGACAACT CGTCTGATCTGGGTTCATCACGAGCAGATAGATGCTGCGCTTCTGGTTGATGCAGTGGTGGATTTGATTACGATTGAGGC GGGGCAGATCGAACCACCCCCGATCAACCTTGTCGGAGCGGCTCAACGGGCGATACAGGCCATCTATCGCTACCGTGATG ATCTCTCCATCGCTATCCTCGATCCGGCAGCGTTGTTTGTGCTTGTGCAGGAGGTGCTGTGA
Upstream 100 bases:
>100_bases GTCATTGTATACCGGCAAGTAGCTTGACTGATGCGTCTGCTTGCCGTATGCTCACACATATTACCGGAGATTCCGGTCAT CTGGTGCTGATACAGGATCT
Downstream 100 bases:
>100_bases TCCTGCTCATCGAGACGATCTCCCGTCGCTATCTTTGCCGACAGAACGATGTTGACGCGGTTGGTTTTCCTTCGACTGCT GACCGTGATGATCGTGGGCG
Product: CheW protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 153; Mature: 153
Protein sequence:
>153_residues MQSLSGQSQTSVYLYVRLAAEHVALVGTAVREIMRWRTPTPVPGAPPTIPGLINQRGQILPVIDARLLLGLPAASPDRTT RLIWVHHEQIDAALLVDAVVDLITIEAGQIEPPPINLVGAAQRAIQAIYRYRDDLSIAILDPAALFVLVQEVL
Sequences:
>Translated_153_residues MQSLSGQSQTSVYLYVRLAAEHVALVGTAVREIMRWRTPTPVPGAPPTIPGLINQRGQILPVIDARLLLGLPAASPDRTT RLIWVHHEQIDAALLVDAVVDLITIEAGQIEPPPINLVGAAQRAIQAIYRYRDDLSIAILDPAALFVLVQEVL >Mature_153_residues MQSLSGQSQTSVYLYVRLAAEHVALVGTAVREIMRWRTPTPVPGAPPTIPGLINQRGQILPVIDARLLLGLPAASPDRTT RLIWVHHEQIDAALLVDAVVDLITIEAGQIEPPPINLVGAAQRAIQAIYRYRDDLSIAILDPAALFVLVQEVL
Specific function: Involved in the transmission of sensory signals from the chemoreceptors to the flagellar motors [H]
COG id: COG0835
COG function: function code NT; Chemotaxis signal transduction protein
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 cheW-like domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002545 [H]
Pfam domain/function: PF01584 CheW [H]
EC number: NA
Molecular weight: Translated: 16636; Mature: 16636
Theoretical pI: Translated: 5.61; Mature: 5.61
Prosite motif: PS50851 CHEW
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQSLSGQSQTSVYLYVRLAAEHVALVGTAVREIMRWRTPTPVPGAPPTIPGLINQRGQIL CCCCCCCCCCEEEEEEEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHCCCCCEE PVIDARLLLGLPAASPDRTTRLIWVHHEQIDAALLVDAVVDLITIEAGQIEPPPINLVGA EHHHHHHHHCCCCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHH AQRAIQAIYRYRDDLSIAILDPAALFVLVQEVL HHHHHHHHHHHCCCCEEEEECHHHHHHHHHHHC >Mature Secondary Structure MQSLSGQSQTSVYLYVRLAAEHVALVGTAVREIMRWRTPTPVPGAPPTIPGLINQRGQIL CCCCCCCCCCEEEEEEEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHCCCCCEE PVIDARLLLGLPAASPDRTTRLIWVHHEQIDAALLVDAVVDLITIEAGQIEPPPINLVGA EHHHHHHHHCCCCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHH AQRAIQAIYRYRDDLSIAILDPAALFVLVQEVL HHHHHHHHHHHCCCCEEEEECHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1601874; 9384377 [H]