Definition Chloroflexus sp. Y-400-fl chromosome, complete genome.
Accession NC_012032
Length 5,268,950

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The map label for this gene is 222525010

Identifier: 222525010

GI number: 222525010

Start: 2203947

End: 2206259

Strand: Direct

Name: 222525010

Synonym: Chy400_1745

Alternate gene names: NA

Gene position: 2203947-2206259 (Clockwise)

Preceding gene: 222525009

Following gene: 222525011

Centisome position: 41.83

GC content: 56.33

Gene sequence:

>2313_bases
ATGACAACAACAGGAGAAGAGCGCAACGAGATGCGCTGGATTCGGGTTGATTTGCATCTACACACGCCTGCTTCTGAAGA
TTACGCTGAACCAAACGTTTCGTACCTTGATATTCTCCAGGAAGCTGAACGTCGTGGTCTTGAGATCATCGCATTTACCG
ATCACAATACTGTTACCGGTTATGAGCAGTTCCAACGTGAACTGGAATTTCTAACCACCCTGGAAAAAGCCGGTCGGCTA
ACCAGTGAAGAAGCTGCCCGTTTAGCCGAGTATCGGCGTCTACTTGAGAAGATTACTGTCCTGCCGGGTTTTGAATTCAC
GTCGCATTTTGGGGCGCACATTCTCGGTATCTTTCCGCCGAATCGCCCGCTCAGTTTGATTGAAGCTACGCTGCTCCAGC
TCGGTATCCCGGCTGAAGTACTCAAGCACGGAGTGTGTAGTGTTGCCAACACCCGGCATGTCACCGAAGCCTACGAGATC
ATTCATCGTGCCGGTGGGATTGTGATTGCTGCTCACGCGAACGGCCCGAATGGTGTTATCACCGAAACTTTGCGCATGGG
CACGAGCGGACAGGCGCGTGTGGCCGTGACACAAAGCCCCTATCTGCACGCTCTTGAGTTTATCAATTTCTACACCGACC
ACGAGAAGTTTACCTCGCCTGGTTTTTACAACGGCAAAACCGAACACTACGAGCGCCGCATGTTCTGCATTCAGGGAAGC
GATGCCCATCGGCTCCGTCGCTTAGCCGAAGCAGAAGCCCAGGTCACGCATCGCCACGGCATCGGTGATCGCTATTTCGA
GGCGTTGCTTCCTGATCGTAGTTTTGAGGCGTTGAAAGCCCTTTTCTCAAGTCAGGATTTTGATCGGGTACGGGTACCAA
AACGCGATCAAAAGCAGTGGTCGCTTGATGTTGCTCGCTTCAGCGGTAGTACGGAACGTCAGGTACTGCGCGCTGTCAAC
GATCCATCGGCAACTGCTTCGCTCTGGCCTGATGTGGCTGCGTTGGCGAATATCGGCGGTGGTGTGCTGATCATTGGCTG
CGATCCCGGCGGTAAAGTGATCGGTGTTGATCGGCCCGACCAGGCGACCGAATCGTTGCGGCAGAGTGTCGCCGAACATC
TTACGCCCCAACCATATCTATCATTTGAACTTATGCACTACGAGGGGCGTGACGTGATCCGCGTTGAGGTCAAAGCCCAA
GACCCGCCACCCTACGTTGGCAGCAACGGCGCAGTCTACATCCGCCGTGATAACGAGACGGTGGTAGCGAATCGCAGCGA
GATCATTCAGCTCTGTCGCCAGGCGATTGCCGCCGGCGAACCATCCCCGCTCGACAACGGTGAAACTCTCGAATTGCCGC
GTTCGGGGGTCGAGATTGTTAGTAGCCAGCGTCGCGGTGGTTCGTGGAGCTACGAGGTTCGTGATCTCCGCACAACTGCC
GGTGTCACCCGTGACCGGGCCCAGGGCTTGTGGGCGTATGCCATTAGCCGTCACGAAGATTTACGGGAAGGCCGCATCGA
TCTGCAAAGCCAGGTACGCTGGCGCGGGCGACTCGGTCTCTGGCGCGCCTATCGCCAGGGCGCTCGCGTCAAATACGATC
TCGTTCACCGCGACCAGAACGGTGTCATTGACCATATTTTCTACGGGGTTAGCGATTGGGGCCTCGGCGAAGCATGGATG
AGTCTCTTGAACGAGGCCGGCGCCCGGATTGAGACCGACGCGGACGATTTTGATCAAGAGGGAACGCTCGACCCAACCCC
ACCTCCTGACATTGAAGCCTGGGGAGAACGCCGGGTGCGCTGGCGCGGACGAGGCGGTATTGTGCGCATCACCCTTGATC
CCGAAGGTCAGCCACGCTTCGATCTGGTGATGAAGGACAAAGACACAGGCGCAATCCAGGAATATAACAACGTGCCACGC
GAGAAACTCTCAGAGGCCTGGCTGGCGCTGATTCGGGTACCACGTCCGCGCACCGGTATTGAGGTGGTGAATGCGACACG
CTCTGAAGATGGTGAGTGGTTCTATACCTTCCGCAATCTTCGTACCGGTGATGTGAGTAGTGCGCCGTGGCGCTTGCAAG
ACATTGAACCGGGGACGGTGCGTGAATATGCAGCCCGGATGTACCACCAGGATATGCCGCTCGACGAAGAGAAGGTTCGT
TGGTGGGGAAACATCGGCTACCTGCGTCCAATGCGTTCACAGGTAGACCTGGTGTACATTGATGAGCAGGGCGTAACCCA
CGTTTATTACGCTGCCCGGCGTGATGAACTGGCCGGTGAATGGCGCGAATTGCTCCAACTGTACGGCGAGTAG

Upstream 100 bases:

>100_bases
CTCCCGACAGCACTGCATCATCTTGAGAAGAGACGGCTAAAAACGAAAAACTTATAAAAACATGTTTGATAAAGATCTGA
ATGTCTAAGGTTTTAATGAT

Downstream 100 bases:

>100_bases
GAATGGCGCGAAGAGGCCTGATTTCTCAGAGATGTTTGTTCGCTTGAATTGGTATCCGAAACATACAATGCATGGCACAC
GCCATTCCCTCGTTCGCTGC

Product: putative transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator

Number of amino acids: Translated: 770; Mature: 769

Protein sequence:

>770_residues
MTTTGEERNEMRWIRVDLHLHTPASEDYAEPNVSYLDILQEAERRGLEIIAFTDHNTVTGYEQFQRELEFLTTLEKAGRL
TSEEAARLAEYRRLLEKITVLPGFEFTSHFGAHILGIFPPNRPLSLIEATLLQLGIPAEVLKHGVCSVANTRHVTEAYEI
IHRAGGIVIAAHANGPNGVITETLRMGTSGQARVAVTQSPYLHALEFINFYTDHEKFTSPGFYNGKTEHYERRMFCIQGS
DAHRLRRLAEAEAQVTHRHGIGDRYFEALLPDRSFEALKALFSSQDFDRVRVPKRDQKQWSLDVARFSGSTERQVLRAVN
DPSATASLWPDVAALANIGGGVLIIGCDPGGKVIGVDRPDQATESLRQSVAEHLTPQPYLSFELMHYEGRDVIRVEVKAQ
DPPPYVGSNGAVYIRRDNETVVANRSEIIQLCRQAIAAGEPSPLDNGETLELPRSGVEIVSSQRRGGSWSYEVRDLRTTA
GVTRDRAQGLWAYAISRHEDLREGRIDLQSQVRWRGRLGLWRAYRQGARVKYDLVHRDQNGVIDHIFYGVSDWGLGEAWM
SLLNEAGARIETDADDFDQEGTLDPTPPPDIEAWGERRVRWRGRGGIVRITLDPEGQPRFDLVMKDKDTGAIQEYNNVPR
EKLSEAWLALIRVPRPRTGIEVVNATRSEDGEWFYTFRNLRTGDVSSAPWRLQDIEPGTVREYAARMYHQDMPLDEEKVR
WWGNIGYLRPMRSQVDLVYIDEQGVTHVYYAARRDELAGEWRELLQLYGE

Sequences:

>Translated_770_residues
MTTTGEERNEMRWIRVDLHLHTPASEDYAEPNVSYLDILQEAERRGLEIIAFTDHNTVTGYEQFQRELEFLTTLEKAGRL
TSEEAARLAEYRRLLEKITVLPGFEFTSHFGAHILGIFPPNRPLSLIEATLLQLGIPAEVLKHGVCSVANTRHVTEAYEI
IHRAGGIVIAAHANGPNGVITETLRMGTSGQARVAVTQSPYLHALEFINFYTDHEKFTSPGFYNGKTEHYERRMFCIQGS
DAHRLRRLAEAEAQVTHRHGIGDRYFEALLPDRSFEALKALFSSQDFDRVRVPKRDQKQWSLDVARFSGSTERQVLRAVN
DPSATASLWPDVAALANIGGGVLIIGCDPGGKVIGVDRPDQATESLRQSVAEHLTPQPYLSFELMHYEGRDVIRVEVKAQ
DPPPYVGSNGAVYIRRDNETVVANRSEIIQLCRQAIAAGEPSPLDNGETLELPRSGVEIVSSQRRGGSWSYEVRDLRTTA
GVTRDRAQGLWAYAISRHEDLREGRIDLQSQVRWRGRLGLWRAYRQGARVKYDLVHRDQNGVIDHIFYGVSDWGLGEAWM
SLLNEAGARIETDADDFDQEGTLDPTPPPDIEAWGERRVRWRGRGGIVRITLDPEGQPRFDLVMKDKDTGAIQEYNNVPR
EKLSEAWLALIRVPRPRTGIEVVNATRSEDGEWFYTFRNLRTGDVSSAPWRLQDIEPGTVREYAARMYHQDMPLDEEKVR
WWGNIGYLRPMRSQVDLVYIDEQGVTHVYYAARRDELAGEWRELLQLYGE
>Mature_769_residues
TTTGEERNEMRWIRVDLHLHTPASEDYAEPNVSYLDILQEAERRGLEIIAFTDHNTVTGYEQFQRELEFLTTLEKAGRLT
SEEAARLAEYRRLLEKITVLPGFEFTSHFGAHILGIFPPNRPLSLIEATLLQLGIPAEVLKHGVCSVANTRHVTEAYEII
HRAGGIVIAAHANGPNGVITETLRMGTSGQARVAVTQSPYLHALEFINFYTDHEKFTSPGFYNGKTEHYERRMFCIQGSD
AHRLRRLAEAEAQVTHRHGIGDRYFEALLPDRSFEALKALFSSQDFDRVRVPKRDQKQWSLDVARFSGSTERQVLRAVND
PSATASLWPDVAALANIGGGVLIIGCDPGGKVIGVDRPDQATESLRQSVAEHLTPQPYLSFELMHYEGRDVIRVEVKAQD
PPPYVGSNGAVYIRRDNETVVANRSEIIQLCRQAIAAGEPSPLDNGETLELPRSGVEIVSSQRRGGSWSYEVRDLRTTAG
VTRDRAQGLWAYAISRHEDLREGRIDLQSQVRWRGRLGLWRAYRQGARVKYDLVHRDQNGVIDHIFYGVSDWGLGEAWMS
LLNEAGARIETDADDFDQEGTLDPTPPPDIEAWGERRVRWRGRGGIVRITLDPEGQPRFDLVMKDKDTGAIQEYNNVPRE
KLSEAWLALIRVPRPRTGIEVVNATRSEDGEWFYTFRNLRTGDVSSAPWRLQDIEPGTVREYAARMYHQDMPLDEEKVRW
WGNIGYLRPMRSQVDLVYIDEQGVTHVYYAARRDELAGEWRELLQLYGE

Specific function: Unknown

COG id: COG2865

COG function: function code K; Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 87453; Mature: 87322

Theoretical pI: Translated: 5.73; Mature: 5.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTTGEERNEMRWIRVDLHLHTPASEDYAEPNVSYLDILQEAERRGLEIIAFTDHNTVTG
CCCCCCCCCCEEEEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHCCCEEEEEECCCCCCC
YEQFQRELEFLTTLEKAGRLTSEEAARLAEYRRLLEKITVLPGFEFTSHFGAHILGIFPP
HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCEEEEECCC
NRPLSLIEATLLQLGIPAEVLKHGVCSVANTRHVTEAYEIIHRAGGIVIAAHANGPNGVI
CCCHHHHHHHHHHCCCCHHHHHCCHHHHHCHHHHHHHHHHHHHCCCEEEEEECCCCCCHH
TETLRMGTSGQARVAVTQSPYLHALEFINFYTDHEKFTSPGFYNGKTEHYERRMFCIQGS
HHHHHCCCCCCEEEEEECCCHHHHHHHHHHHCCCHHCCCCCCCCCCCHHHEEEEEEEECC
DAHRLRRLAEAEAQVTHRHGIGDRYFEALLPDRSFEALKALFSSQDFDRVRVPKRDQKQW
CHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCCCHHH
SLDVARFSGSTERQVLRAVNDPSATASLWPDVAALANIGGGVLIIGCDPGGKVIGVDRPD
EEEHHHHCCCHHHHHHHHHCCCCCCHHHCHHHHHHHCCCCCEEEEEECCCCEEEECCCCC
QATESLRQSVAEHLTPQPYLSFELMHYEGRDVIRVEVKAQDPPPYVGSNGAVYIRRDNET
HHHHHHHHHHHHHCCCCCCEEEEEEEECCCEEEEEEEEECCCCCCCCCCCEEEEEECCCE
VVANRSEIIQLCRQAIAAGEPSPLDNGETLELPRSGVEIVSSQRRGGSWSYEVRDLRTTA
EEECHHHHHHHHHHHHHCCCCCCCCCCCEEECCCCCHHHHHCCCCCCCCEEEHHHHHHHH
GVTRDRAQGLWAYAISRHEDLREGRIDLQSQVRWRGRLGLWRAYRQGARVKYDLVHRDQN
CCCHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCC
GVIDHIFYGVSDWGLGEAWMSLLNEAGARIETDADDFDQEGTLDPTPPPDIEAWGERRVR
CCCHHHHCCCCCCCHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCCCCCCCHHCCCCEEE
WRGRGGIVRITLDPEGQPRFDLVMKDKDTGAIQEYNNVPREKLSEAWLALIRVPRPRTGI
EECCCCEEEEEECCCCCCCEEEEEECCCCCHHHHHHCCCHHHHHHHHHHHHCCCCCCCCC
EVVNATRSEDGEWFYTFRNLRTGDVSSAPWRLQDIEPGTVREYAARMYHQDMPLDEEKVR
EEEECCCCCCCCEEEEEECCCCCCCCCCCEEEECCCCCHHHHHHHHHHHCCCCCCHHHHH
WWGNIGYLRPMRSQVDLVYIDEQGVTHVYYAARRDELAGEWRELLQLYGE
HCCCCCCCCCCCCCCCEEEECCCCCEEEEEEHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TTTGEERNEMRWIRVDLHLHTPASEDYAEPNVSYLDILQEAERRGLEIIAFTDHNTVTG
CCCCCCCCCEEEEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHCCCEEEEEECCCCCCC
YEQFQRELEFLTTLEKAGRLTSEEAARLAEYRRLLEKITVLPGFEFTSHFGAHILGIFPP
HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCEEEEECCC
NRPLSLIEATLLQLGIPAEVLKHGVCSVANTRHVTEAYEIIHRAGGIVIAAHANGPNGVI
CCCHHHHHHHHHHCCCCHHHHHCCHHHHHCHHHHHHHHHHHHHCCCEEEEEECCCCCCHH
TETLRMGTSGQARVAVTQSPYLHALEFINFYTDHEKFTSPGFYNGKTEHYERRMFCIQGS
HHHHHCCCCCCEEEEEECCCHHHHHHHHHHHCCCHHCCCCCCCCCCCHHHEEEEEEEECC
DAHRLRRLAEAEAQVTHRHGIGDRYFEALLPDRSFEALKALFSSQDFDRVRVPKRDQKQW
CHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCCCHHH
SLDVARFSGSTERQVLRAVNDPSATASLWPDVAALANIGGGVLIIGCDPGGKVIGVDRPD
EEEHHHHCCCHHHHHHHHHCCCCCCHHHCHHHHHHHCCCCCEEEEEECCCCEEEECCCCC
QATESLRQSVAEHLTPQPYLSFELMHYEGRDVIRVEVKAQDPPPYVGSNGAVYIRRDNET
HHHHHHHHHHHHHCCCCCCEEEEEEEECCCEEEEEEEEECCCCCCCCCCCEEEEEECCCE
VVANRSEIIQLCRQAIAAGEPSPLDNGETLELPRSGVEIVSSQRRGGSWSYEVRDLRTTA
EEECHHHHHHHHHHHHHCCCCCCCCCCCEEECCCCCHHHHHCCCCCCCCEEEHHHHHHHH
GVTRDRAQGLWAYAISRHEDLREGRIDLQSQVRWRGRLGLWRAYRQGARVKYDLVHRDQN
CCCHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCC
GVIDHIFYGVSDWGLGEAWMSLLNEAGARIETDADDFDQEGTLDPTPPPDIEAWGERRVR
CCCHHHHCCCCCCCHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCCCCCCCHHCCCCEEE
WRGRGGIVRITLDPEGQPRFDLVMKDKDTGAIQEYNNVPREKLSEAWLALIRVPRPRTGI
EECCCCEEEEEECCCCCCCEEEEEECCCCCHHHHHHCCCHHHHHHHHHHHHCCCCCCCCC
EVVNATRSEDGEWFYTFRNLRTGDVSSAPWRLQDIEPGTVREYAARMYHQDMPLDEEKVR
EEEECCCCCCCCEEEEEECCCCCCCCCCCEEEECCCCCHHHHHHHHHHHCCCCCCHHHHH
WWGNIGYLRPMRSQVDLVYIDEQGVTHVYYAARRDELAGEWRELLQLYGE
HCCCCCCCCCCCCCCCEEEECCCCCEEEEEEHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA