| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is 222525010
Identifier: 222525010
GI number: 222525010
Start: 2203947
End: 2206259
Strand: Direct
Name: 222525010
Synonym: Chy400_1745
Alternate gene names: NA
Gene position: 2203947-2206259 (Clockwise)
Preceding gene: 222525009
Following gene: 222525011
Centisome position: 41.83
GC content: 56.33
Gene sequence:
>2313_bases ATGACAACAACAGGAGAAGAGCGCAACGAGATGCGCTGGATTCGGGTTGATTTGCATCTACACACGCCTGCTTCTGAAGA TTACGCTGAACCAAACGTTTCGTACCTTGATATTCTCCAGGAAGCTGAACGTCGTGGTCTTGAGATCATCGCATTTACCG ATCACAATACTGTTACCGGTTATGAGCAGTTCCAACGTGAACTGGAATTTCTAACCACCCTGGAAAAAGCCGGTCGGCTA ACCAGTGAAGAAGCTGCCCGTTTAGCCGAGTATCGGCGTCTACTTGAGAAGATTACTGTCCTGCCGGGTTTTGAATTCAC GTCGCATTTTGGGGCGCACATTCTCGGTATCTTTCCGCCGAATCGCCCGCTCAGTTTGATTGAAGCTACGCTGCTCCAGC TCGGTATCCCGGCTGAAGTACTCAAGCACGGAGTGTGTAGTGTTGCCAACACCCGGCATGTCACCGAAGCCTACGAGATC ATTCATCGTGCCGGTGGGATTGTGATTGCTGCTCACGCGAACGGCCCGAATGGTGTTATCACCGAAACTTTGCGCATGGG CACGAGCGGACAGGCGCGTGTGGCCGTGACACAAAGCCCCTATCTGCACGCTCTTGAGTTTATCAATTTCTACACCGACC ACGAGAAGTTTACCTCGCCTGGTTTTTACAACGGCAAAACCGAACACTACGAGCGCCGCATGTTCTGCATTCAGGGAAGC GATGCCCATCGGCTCCGTCGCTTAGCCGAAGCAGAAGCCCAGGTCACGCATCGCCACGGCATCGGTGATCGCTATTTCGA GGCGTTGCTTCCTGATCGTAGTTTTGAGGCGTTGAAAGCCCTTTTCTCAAGTCAGGATTTTGATCGGGTACGGGTACCAA AACGCGATCAAAAGCAGTGGTCGCTTGATGTTGCTCGCTTCAGCGGTAGTACGGAACGTCAGGTACTGCGCGCTGTCAAC GATCCATCGGCAACTGCTTCGCTCTGGCCTGATGTGGCTGCGTTGGCGAATATCGGCGGTGGTGTGCTGATCATTGGCTG CGATCCCGGCGGTAAAGTGATCGGTGTTGATCGGCCCGACCAGGCGACCGAATCGTTGCGGCAGAGTGTCGCCGAACATC TTACGCCCCAACCATATCTATCATTTGAACTTATGCACTACGAGGGGCGTGACGTGATCCGCGTTGAGGTCAAAGCCCAA GACCCGCCACCCTACGTTGGCAGCAACGGCGCAGTCTACATCCGCCGTGATAACGAGACGGTGGTAGCGAATCGCAGCGA GATCATTCAGCTCTGTCGCCAGGCGATTGCCGCCGGCGAACCATCCCCGCTCGACAACGGTGAAACTCTCGAATTGCCGC GTTCGGGGGTCGAGATTGTTAGTAGCCAGCGTCGCGGTGGTTCGTGGAGCTACGAGGTTCGTGATCTCCGCACAACTGCC GGTGTCACCCGTGACCGGGCCCAGGGCTTGTGGGCGTATGCCATTAGCCGTCACGAAGATTTACGGGAAGGCCGCATCGA TCTGCAAAGCCAGGTACGCTGGCGCGGGCGACTCGGTCTCTGGCGCGCCTATCGCCAGGGCGCTCGCGTCAAATACGATC TCGTTCACCGCGACCAGAACGGTGTCATTGACCATATTTTCTACGGGGTTAGCGATTGGGGCCTCGGCGAAGCATGGATG AGTCTCTTGAACGAGGCCGGCGCCCGGATTGAGACCGACGCGGACGATTTTGATCAAGAGGGAACGCTCGACCCAACCCC ACCTCCTGACATTGAAGCCTGGGGAGAACGCCGGGTGCGCTGGCGCGGACGAGGCGGTATTGTGCGCATCACCCTTGATC CCGAAGGTCAGCCACGCTTCGATCTGGTGATGAAGGACAAAGACACAGGCGCAATCCAGGAATATAACAACGTGCCACGC GAGAAACTCTCAGAGGCCTGGCTGGCGCTGATTCGGGTACCACGTCCGCGCACCGGTATTGAGGTGGTGAATGCGACACG CTCTGAAGATGGTGAGTGGTTCTATACCTTCCGCAATCTTCGTACCGGTGATGTGAGTAGTGCGCCGTGGCGCTTGCAAG ACATTGAACCGGGGACGGTGCGTGAATATGCAGCCCGGATGTACCACCAGGATATGCCGCTCGACGAAGAGAAGGTTCGT TGGTGGGGAAACATCGGCTACCTGCGTCCAATGCGTTCACAGGTAGACCTGGTGTACATTGATGAGCAGGGCGTAACCCA CGTTTATTACGCTGCCCGGCGTGATGAACTGGCCGGTGAATGGCGCGAATTGCTCCAACTGTACGGCGAGTAG
Upstream 100 bases:
>100_bases CTCCCGACAGCACTGCATCATCTTGAGAAGAGACGGCTAAAAACGAAAAACTTATAAAAACATGTTTGATAAAGATCTGA ATGTCTAAGGTTTTAATGAT
Downstream 100 bases:
>100_bases GAATGGCGCGAAGAGGCCTGATTTCTCAGAGATGTTTGTTCGCTTGAATTGGTATCCGAAACATACAATGCATGGCACAC GCCATTCCCTCGTTCGCTGC
Product: putative transcriptional regulator
Products: NA
Alternate protein names: Transcriptional Regulator
Number of amino acids: Translated: 770; Mature: 769
Protein sequence:
>770_residues MTTTGEERNEMRWIRVDLHLHTPASEDYAEPNVSYLDILQEAERRGLEIIAFTDHNTVTGYEQFQRELEFLTTLEKAGRL TSEEAARLAEYRRLLEKITVLPGFEFTSHFGAHILGIFPPNRPLSLIEATLLQLGIPAEVLKHGVCSVANTRHVTEAYEI IHRAGGIVIAAHANGPNGVITETLRMGTSGQARVAVTQSPYLHALEFINFYTDHEKFTSPGFYNGKTEHYERRMFCIQGS DAHRLRRLAEAEAQVTHRHGIGDRYFEALLPDRSFEALKALFSSQDFDRVRVPKRDQKQWSLDVARFSGSTERQVLRAVN DPSATASLWPDVAALANIGGGVLIIGCDPGGKVIGVDRPDQATESLRQSVAEHLTPQPYLSFELMHYEGRDVIRVEVKAQ DPPPYVGSNGAVYIRRDNETVVANRSEIIQLCRQAIAAGEPSPLDNGETLELPRSGVEIVSSQRRGGSWSYEVRDLRTTA GVTRDRAQGLWAYAISRHEDLREGRIDLQSQVRWRGRLGLWRAYRQGARVKYDLVHRDQNGVIDHIFYGVSDWGLGEAWM SLLNEAGARIETDADDFDQEGTLDPTPPPDIEAWGERRVRWRGRGGIVRITLDPEGQPRFDLVMKDKDTGAIQEYNNVPR EKLSEAWLALIRVPRPRTGIEVVNATRSEDGEWFYTFRNLRTGDVSSAPWRLQDIEPGTVREYAARMYHQDMPLDEEKVR WWGNIGYLRPMRSQVDLVYIDEQGVTHVYYAARRDELAGEWRELLQLYGE
Sequences:
>Translated_770_residues MTTTGEERNEMRWIRVDLHLHTPASEDYAEPNVSYLDILQEAERRGLEIIAFTDHNTVTGYEQFQRELEFLTTLEKAGRL TSEEAARLAEYRRLLEKITVLPGFEFTSHFGAHILGIFPPNRPLSLIEATLLQLGIPAEVLKHGVCSVANTRHVTEAYEI IHRAGGIVIAAHANGPNGVITETLRMGTSGQARVAVTQSPYLHALEFINFYTDHEKFTSPGFYNGKTEHYERRMFCIQGS DAHRLRRLAEAEAQVTHRHGIGDRYFEALLPDRSFEALKALFSSQDFDRVRVPKRDQKQWSLDVARFSGSTERQVLRAVN DPSATASLWPDVAALANIGGGVLIIGCDPGGKVIGVDRPDQATESLRQSVAEHLTPQPYLSFELMHYEGRDVIRVEVKAQ DPPPYVGSNGAVYIRRDNETVVANRSEIIQLCRQAIAAGEPSPLDNGETLELPRSGVEIVSSQRRGGSWSYEVRDLRTTA GVTRDRAQGLWAYAISRHEDLREGRIDLQSQVRWRGRLGLWRAYRQGARVKYDLVHRDQNGVIDHIFYGVSDWGLGEAWM SLLNEAGARIETDADDFDQEGTLDPTPPPDIEAWGERRVRWRGRGGIVRITLDPEGQPRFDLVMKDKDTGAIQEYNNVPR EKLSEAWLALIRVPRPRTGIEVVNATRSEDGEWFYTFRNLRTGDVSSAPWRLQDIEPGTVREYAARMYHQDMPLDEEKVR WWGNIGYLRPMRSQVDLVYIDEQGVTHVYYAARRDELAGEWRELLQLYGE >Mature_769_residues TTTGEERNEMRWIRVDLHLHTPASEDYAEPNVSYLDILQEAERRGLEIIAFTDHNTVTGYEQFQRELEFLTTLEKAGRLT SEEAARLAEYRRLLEKITVLPGFEFTSHFGAHILGIFPPNRPLSLIEATLLQLGIPAEVLKHGVCSVANTRHVTEAYEII HRAGGIVIAAHANGPNGVITETLRMGTSGQARVAVTQSPYLHALEFINFYTDHEKFTSPGFYNGKTEHYERRMFCIQGSD AHRLRRLAEAEAQVTHRHGIGDRYFEALLPDRSFEALKALFSSQDFDRVRVPKRDQKQWSLDVARFSGSTERQVLRAVND PSATASLWPDVAALANIGGGVLIIGCDPGGKVIGVDRPDQATESLRQSVAEHLTPQPYLSFELMHYEGRDVIRVEVKAQD PPPYVGSNGAVYIRRDNETVVANRSEIIQLCRQAIAAGEPSPLDNGETLELPRSGVEIVSSQRRGGSWSYEVRDLRTTAG VTRDRAQGLWAYAISRHEDLREGRIDLQSQVRWRGRLGLWRAYRQGARVKYDLVHRDQNGVIDHIFYGVSDWGLGEAWMS LLNEAGARIETDADDFDQEGTLDPTPPPDIEAWGERRVRWRGRGGIVRITLDPEGQPRFDLVMKDKDTGAIQEYNNVPRE KLSEAWLALIRVPRPRTGIEVVNATRSEDGEWFYTFRNLRTGDVSSAPWRLQDIEPGTVREYAARMYHQDMPLDEEKVRW WGNIGYLRPMRSQVDLVYIDEQGVTHVYYAARRDELAGEWRELLQLYGE
Specific function: Unknown
COG id: COG2865
COG function: function code K; Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 87453; Mature: 87322
Theoretical pI: Translated: 5.73; Mature: 5.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTTGEERNEMRWIRVDLHLHTPASEDYAEPNVSYLDILQEAERRGLEIIAFTDHNTVTG CCCCCCCCCCEEEEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHCCCEEEEEECCCCCCC YEQFQRELEFLTTLEKAGRLTSEEAARLAEYRRLLEKITVLPGFEFTSHFGAHILGIFPP HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCEEEEECCC NRPLSLIEATLLQLGIPAEVLKHGVCSVANTRHVTEAYEIIHRAGGIVIAAHANGPNGVI CCCHHHHHHHHHHCCCCHHHHHCCHHHHHCHHHHHHHHHHHHHCCCEEEEEECCCCCCHH TETLRMGTSGQARVAVTQSPYLHALEFINFYTDHEKFTSPGFYNGKTEHYERRMFCIQGS HHHHHCCCCCCEEEEEECCCHHHHHHHHHHHCCCHHCCCCCCCCCCCHHHEEEEEEEECC DAHRLRRLAEAEAQVTHRHGIGDRYFEALLPDRSFEALKALFSSQDFDRVRVPKRDQKQW CHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCCCHHH SLDVARFSGSTERQVLRAVNDPSATASLWPDVAALANIGGGVLIIGCDPGGKVIGVDRPD EEEHHHHCCCHHHHHHHHHCCCCCCHHHCHHHHHHHCCCCCEEEEEECCCCEEEECCCCC QATESLRQSVAEHLTPQPYLSFELMHYEGRDVIRVEVKAQDPPPYVGSNGAVYIRRDNET HHHHHHHHHHHHHCCCCCCEEEEEEEECCCEEEEEEEEECCCCCCCCCCCEEEEEECCCE VVANRSEIIQLCRQAIAAGEPSPLDNGETLELPRSGVEIVSSQRRGGSWSYEVRDLRTTA EEECHHHHHHHHHHHHHCCCCCCCCCCCEEECCCCCHHHHHCCCCCCCCEEEHHHHHHHH GVTRDRAQGLWAYAISRHEDLREGRIDLQSQVRWRGRLGLWRAYRQGARVKYDLVHRDQN CCCHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCC GVIDHIFYGVSDWGLGEAWMSLLNEAGARIETDADDFDQEGTLDPTPPPDIEAWGERRVR CCCHHHHCCCCCCCHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCCCCCCCHHCCCCEEE WRGRGGIVRITLDPEGQPRFDLVMKDKDTGAIQEYNNVPREKLSEAWLALIRVPRPRTGI EECCCCEEEEEECCCCCCCEEEEEECCCCCHHHHHHCCCHHHHHHHHHHHHCCCCCCCCC EVVNATRSEDGEWFYTFRNLRTGDVSSAPWRLQDIEPGTVREYAARMYHQDMPLDEEKVR EEEECCCCCCCCEEEEEECCCCCCCCCCCEEEECCCCCHHHHHHHHHHHCCCCCCHHHHH WWGNIGYLRPMRSQVDLVYIDEQGVTHVYYAARRDELAGEWRELLQLYGE HCCCCCCCCCCCCCCCEEEECCCCCEEEEEEHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure TTTGEERNEMRWIRVDLHLHTPASEDYAEPNVSYLDILQEAERRGLEIIAFTDHNTVTG CCCCCCCCCEEEEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHCCCEEEEEECCCCCCC YEQFQRELEFLTTLEKAGRLTSEEAARLAEYRRLLEKITVLPGFEFTSHFGAHILGIFPP HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCEEEEECCC NRPLSLIEATLLQLGIPAEVLKHGVCSVANTRHVTEAYEIIHRAGGIVIAAHANGPNGVI CCCHHHHHHHHHHCCCCHHHHHCCHHHHHCHHHHHHHHHHHHHCCCEEEEEECCCCCCHH TETLRMGTSGQARVAVTQSPYLHALEFINFYTDHEKFTSPGFYNGKTEHYERRMFCIQGS HHHHHCCCCCCEEEEEECCCHHHHHHHHHHHCCCHHCCCCCCCCCCCHHHEEEEEEEECC DAHRLRRLAEAEAQVTHRHGIGDRYFEALLPDRSFEALKALFSSQDFDRVRVPKRDQKQW CHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCCCHHH SLDVARFSGSTERQVLRAVNDPSATASLWPDVAALANIGGGVLIIGCDPGGKVIGVDRPD EEEHHHHCCCHHHHHHHHHCCCCCCHHHCHHHHHHHCCCCCEEEEEECCCCEEEECCCCC QATESLRQSVAEHLTPQPYLSFELMHYEGRDVIRVEVKAQDPPPYVGSNGAVYIRRDNET HHHHHHHHHHHHHCCCCCCEEEEEEEECCCEEEEEEEEECCCCCCCCCCCEEEEEECCCE VVANRSEIIQLCRQAIAAGEPSPLDNGETLELPRSGVEIVSSQRRGGSWSYEVRDLRTTA EEECHHHHHHHHHHHHHCCCCCCCCCCCEEECCCCCHHHHHCCCCCCCCEEEHHHHHHHH GVTRDRAQGLWAYAISRHEDLREGRIDLQSQVRWRGRLGLWRAYRQGARVKYDLVHRDQN CCCHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCC GVIDHIFYGVSDWGLGEAWMSLLNEAGARIETDADDFDQEGTLDPTPPPDIEAWGERRVR CCCHHHHCCCCCCCHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCCCCCCCHHCCCCEEE WRGRGGIVRITLDPEGQPRFDLVMKDKDTGAIQEYNNVPREKLSEAWLALIRVPRPRTGI EECCCCEEEEEECCCCCCCEEEEEECCCCCHHHHHHCCCHHHHHHHHHHHHCCCCCCCCC EVVNATRSEDGEWFYTFRNLRTGDVSSAPWRLQDIEPGTVREYAARMYHQDMPLDEEKVR EEEECCCCCCCCEEEEEECCCCCCCCCCCEEEECCCCCHHHHHHHHHHHCCCCCCHHHHH WWGNIGYLRPMRSQVDLVYIDEQGVTHVYYAARRDELAGEWRELLQLYGE HCCCCCCCCCCCCCCCEEEECCCCCEEEEEEHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA