| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is 222525008
Identifier: 222525008
GI number: 222525008
Start: 2200181
End: 2201410
Strand: Direct
Name: 222525008
Synonym: Chy400_1743
Alternate gene names: NA
Gene position: 2200181-2201410 (Clockwise)
Preceding gene: 222525006
Following gene: 222525009
Centisome position: 41.76
GC content: 59.19
Gene sequence:
>1230_bases ATGGCGGCTCCAGCAGTACAACGGGTGCGAATCTACTTGAACGGCGAGGATCGGAGCGGAGATCGTCCCCTTTACCAGGT AGTATTAGCCGAATTGCGCCAGAGTGGGGCAACCGGTGCGACAGTGATTGCAGCCCTGACCGGCTTTGGGCCACGTCGGC AGGTACCTCCCCTTGCCGACCGCCAGCCGGTAGTGATTGAGTGGGTTGATCACGCCGGTCGCATCAAACGGCTCCTTCCC CTGATCGGCGAGCTGGCACCTTCAGCTTTAATCACCGTTGAACCGGTCGAGGTAGTTCAGGGTGCTCTACGTCCGGGCGG GCCATTCGGGGCTGAACAGATGGTATCCGATCTGATGCAGGTGCCGTCCAGAACTATTGCGCATAACGCCTCGCTTATTG AGGCCCTAGAGCACTTTGTGACGGCCAGGGCAGAGGTACTGCCTGTTATTGACAACAACACGGTGATCGGTGTTATCTCG ACCCGTGAACTGGCGTGGCGGGCAGGGTTGCGCCTGGCTCCAGAATTGCTCAGAGTACTGGGACCGGCGGAAGGCACTGC ACTGGTGGCAGCGTTGAAGGGACGAAGCGTAGGCGAGATTGTCAACCGCGAGGTGTGTGGAATTGCGCCGACAACACCAA TCCCCCAGGCGCTCACGATGATGATCGAATGGGGATATACCGAGATACCGGTTGTTGATGATCAGGGCCGCCTGGCCGGA GTCTTTGGTCAGCGCGAGGTCTTACAGGCCGCAGCTCGAACACTCACCGCTGTCCAGACTTCAGAAGGTGTGCAGGTTCG TATGGTCATGCAGGCCGCTACCGCCCGGATTGCGCTCGGCCAATCACTGGCAACCGCGCTTGCGCTACTTATCACAGCAC CCGGCCAACTCTTGTTCGTCGTTGATGAGGCCGGTCGTCTGGTCGGCACCTTACGCCTGGCCAGTGTCCTCAATCATTTC CAGGGTGACGAGCGGAGTCTACTGTTAGCAGCAATTCAACGTGCGCAACCAACGCCGGCGACGGCACTGCCCGGCGCTCG CCAAACGATAGACACCCTGGTCGAGCCACCTCCATCTACCGTCGCACTTGATGCCAGCCTCGGCTCAGCGGCACAACAGT TGCTTGACCATAACGCCGAGCGCTTACCGGTCGTTGATCACGATGGTCGACTGTCGGGTATAATCGCACGTGGTGCCCTG ATCAGGGCCTTATTACAACAAAGCGAATAG
Upstream 100 bases:
>100_bases CGTAGTCTTGTGAGCGACAATAGAAGTTGTTACTACCGGGTTCAGATGAGGCAAGATCGTTCCAAACAATCCACATATCA ATCCGGTTAAGGAGAACAAT
Downstream 100 bases:
>100_bases TAGGACTGGTAACCTATGGCTGATCGTGTCTTAATTACTGGCGGAGCCGGTTTTCTGGGCATTAACCTGACGCGCTACCT GTTAGCGCGAGGGTATCTCG
Product: CBS domain-containing protein
Products: NA
Alternate protein names: CBS Domain Containing Protein
Number of amino acids: Translated: 409; Mature: 408
Protein sequence:
>409_residues MAAPAVQRVRIYLNGEDRSGDRPLYQVVLAELRQSGATGATVIAALTGFGPRRQVPPLADRQPVVIEWVDHAGRIKRLLP LIGELAPSALITVEPVEVVQGALRPGGPFGAEQMVSDLMQVPSRTIAHNASLIEALEHFVTARAEVLPVIDNNTVIGVIS TRELAWRAGLRLAPELLRVLGPAEGTALVAALKGRSVGEIVNREVCGIAPTTPIPQALTMMIEWGYTEIPVVDDQGRLAG VFGQREVLQAAARTLTAVQTSEGVQVRMVMQAATARIALGQSLATALALLITAPGQLLFVVDEAGRLVGTLRLASVLNHF QGDERSLLLAAIQRAQPTPATALPGARQTIDTLVEPPPSTVALDASLGSAAQQLLDHNAERLPVVDHDGRLSGIIARGAL IRALLQQSE
Sequences:
>Translated_409_residues MAAPAVQRVRIYLNGEDRSGDRPLYQVVLAELRQSGATGATVIAALTGFGPRRQVPPLADRQPVVIEWVDHAGRIKRLLP LIGELAPSALITVEPVEVVQGALRPGGPFGAEQMVSDLMQVPSRTIAHNASLIEALEHFVTARAEVLPVIDNNTVIGVIS TRELAWRAGLRLAPELLRVLGPAEGTALVAALKGRSVGEIVNREVCGIAPTTPIPQALTMMIEWGYTEIPVVDDQGRLAG VFGQREVLQAAARTLTAVQTSEGVQVRMVMQAATARIALGQSLATALALLITAPGQLLFVVDEAGRLVGTLRLASVLNHF QGDERSLLLAAIQRAQPTPATALPGARQTIDTLVEPPPSTVALDASLGSAAQQLLDHNAERLPVVDHDGRLSGIIARGAL IRALLQQSE >Mature_408_residues AAPAVQRVRIYLNGEDRSGDRPLYQVVLAELRQSGATGATVIAALTGFGPRRQVPPLADRQPVVIEWVDHAGRIKRLLPL IGELAPSALITVEPVEVVQGALRPGGPFGAEQMVSDLMQVPSRTIAHNASLIEALEHFVTARAEVLPVIDNNTVIGVIST RELAWRAGLRLAPELLRVLGPAEGTALVAALKGRSVGEIVNREVCGIAPTTPIPQALTMMIEWGYTEIPVVDDQGRLAGV FGQREVLQAAARTLTAVQTSEGVQVRMVMQAATARIALGQSLATALALLITAPGQLLFVVDEAGRLVGTLRLASVLNHFQ GDERSLLLAAIQRAQPTPATALPGARQTIDTLVEPPPSTVALDASLGSAAQQLLDHNAERLPVVDHDGRLSGIIARGALI RALLQQSE
Specific function: Unknown
COG id: COG0517
COG function: function code R; FOG: CBS domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43318; Mature: 43187
Theoretical pI: Translated: 6.27; Mature: 6.27
Prosite motif: PS00153 ATPASE_GAMMA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAAPAVQRVRIYLNGEDRSGDRPLYQVVLAELRQSGATGATVIAALTGFGPRRQVPPLAD CCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCC RQPVVIEWVDHAGRIKRLLPLIGELAPSALITVEPVEVVQGALRPGGPFGAEQMVSDLMQ CCCEEEEEHHHHHHHHHHHHHHHHHCCCCEEEECHHHHHHHHCCCCCCCCHHHHHHHHHH VPSRTIAHNASLIEALEHFVTARAEVLPVIDNNTVIGVISTRELAWRAGLRLAPELLRVL CCCHHHHHHHHHHHHHHHHHHHHHHEEEEECCCEEEEEEECHHHHHHHCCHHHHHHHHHH GPAEGTALVAALKGRSVGEIVNREVCGIAPTTPIPQALTMMIEWGYTEIPVVDDQGRLAG CCCCCCEEEEECCCCCHHHHHCCHHCCCCCCCCCHHHHHHHHHCCCCCCCEECCCCCEEE VFGQREVLQAAARTLTAVQTSEGVQVRMVMQAATARIALGQSLATALALLITAPGQLLFV CCCHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEE VDEAGRLVGTLRLASVLNHFQGDERSLLLAAIQRAQPTPATALPGARQTIDTLVEPPPST EECCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHCCCCCCC VALDASLGSAAQQLLDHNAERLPVVDHDGRLSGIIARGALIRALLQQSE EEEECHHHHHHHHHHHCCCCCCCEECCCCCHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure AAPAVQRVRIYLNGEDRSGDRPLYQVVLAELRQSGATGATVIAALTGFGPRRQVPPLAD CCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCC RQPVVIEWVDHAGRIKRLLPLIGELAPSALITVEPVEVVQGALRPGGPFGAEQMVSDLMQ CCCEEEEEHHHHHHHHHHHHHHHHHCCCCEEEECHHHHHHHHCCCCCCCCHHHHHHHHHH VPSRTIAHNASLIEALEHFVTARAEVLPVIDNNTVIGVISTRELAWRAGLRLAPELLRVL CCCHHHHHHHHHHHHHHHHHHHHHHEEEEECCCEEEEEEECHHHHHHHCCHHHHHHHHHH GPAEGTALVAALKGRSVGEIVNREVCGIAPTTPIPQALTMMIEWGYTEIPVVDDQGRLAG CCCCCCEEEEECCCCCHHHHHCCHHCCCCCCCCCHHHHHHHHHCCCCCCCEECCCCCEEE VFGQREVLQAAARTLTAVQTSEGVQVRMVMQAATARIALGQSLATALALLITAPGQLLFV CCCHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEE VDEAGRLVGTLRLASVLNHFQGDERSLLLAAIQRAQPTPATALPGARQTIDTLVEPPPST EECCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHCCCCCCC VALDASLGSAAQQLLDHNAERLPVVDHDGRLSGIIARGALIRALLQQSE EEEECHHHHHHHHHHHCCCCCCCEECCCCCHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA