| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is 222525006
Identifier: 222525006
GI number: 222525006
Start: 2198382
End: 2199620
Strand: Direct
Name: 222525006
Synonym: Chy400_1741
Alternate gene names: NA
Gene position: 2198382-2199620 (Clockwise)
Preceding gene: 222525005
Following gene: 222525008
Centisome position: 41.72
GC content: 56.5
Gene sequence:
>1239_bases ATGCATGATCGTGTGTGGCGTACAGTACGCCCTCTGACCGCGATGATTGGTATCGTGCTATTCTGGTTTGTAATCGGTGG CTTGAGTGGCTGCACAGCAGCCCCCATCCTGGGGGAAGTCAGCGCAACCGCCGAACGGTACAATCCGGGTCGCGATACCC CATTAGCGATTAGCTATGAGATTGGGCGATCCGCCCTGGTTGATATCTACATCCTCGATGCGAATGGACAACGGTATGAC CTGCGCCGGGCACAGCCACGAGCAGCCGCAAACGATCCATACATCCTGCGCTTTGATGGCAGTGTTCCAACCGACGACCC GCAGGTACTACGTCGACTACTACCACCTGGACAATACACGCTGGTTGTAGCTGCCCGTGCGGCTGATGGTAATGACAGCG ATGAACGCCGTCTGCCATTGAGCATCGAAGGCGATGTGATTGCTCCACCCGAAATCGAAAATCTGATGGTCTGGCCGCCG GTTATTTCACCCAACGCTGATGCCATAGATGATGTCGCCGAATTTACTTATCGCCTACCGGTCAGCGCCACCGTCAATAT TGAGGTACAGGCACCGAACGGCGAAATCATTCCGGTCGTCACCCGCGAAGAAGAGGGGCCATACGAGCAGCGTCACGTCT GGAATGGCAAACGCCCCAACGGTTCGCTCCTCGAAGCCGGTGTTTACACCTACACAGTACGGGCAGAAGATGGCTTCGGC AATGTGGTACAGCGTCAGGGGCAAATCACCCTTGCCGACGTTGGTCAACCCGAAGCACGGATCGTCTACTCGATGATTGC CCCCCAGCGCGTTATGCTAGGCGAGGTCATTACGGTCACTATCCGGGTACGAAACACCGGCACCGTGCCCATCCGCACCT ACGGGCCACCGAGCGGCTACGAATACACGACCGATGAAGTCTTCTCTTCGGTTGAAGACGGCATCTACGCTGCGCAAGCC GGTGGCTTCTGGCGAGTGGGCATGGATTGGGACGCCAACAGCGGTGGTGGTCCCAAACGCTACCCATACCGGTGGGCTAT TTCACCCCGTCCGCCCGAAGAGTGGGCAAAACCGTTTGTCGAAGACTTCCTGTACCCAGGCGAAGAGGCCGAGATTATTG GCCGGGTGCGTATCTTACAACGTGAAACACGGATGGGATTCTACGTCGGTCTGATACAGGATGGCGTTGGTTTTTTCCAG GATCGCACTGGACGAACCATTATCGATGTTGGTTTCTAG
Upstream 100 bases:
>100_bases GATGCAATCTTCACACCTGACACCCTTACCCCTCAACCGGATGCTTCATAACAGAGCGAATCTGGGATGAGGTGAGGGTA GGTAAACACGGGAGATCACT
Downstream 100 bases:
>100_bases GATGCAAAAAACCTGCCCCCTCGTTGTTGAGGGGGCAGGTCACGAACCGTTCAACCGCTCTAGCGGTCGGCCACCTTAAA AGTTGCACTACCGATTGAGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 412; Mature: 412
Protein sequence:
>412_residues MHDRVWRTVRPLTAMIGIVLFWFVIGGLSGCTAAPILGEVSATAERYNPGRDTPLAISYEIGRSALVDIYILDANGQRYD LRRAQPRAAANDPYILRFDGSVPTDDPQVLRRLLPPGQYTLVVAARAADGNDSDERRLPLSIEGDVIAPPEIENLMVWPP VISPNADAIDDVAEFTYRLPVSATVNIEVQAPNGEIIPVVTREEEGPYEQRHVWNGKRPNGSLLEAGVYTYTVRAEDGFG NVVQRQGQITLADVGQPEARIVYSMIAPQRVMLGEVITVTIRVRNTGTVPIRTYGPPSGYEYTTDEVFSSVEDGIYAAQA GGFWRVGMDWDANSGGGPKRYPYRWAISPRPPEEWAKPFVEDFLYPGEEAEIIGRVRILQRETRMGFYVGLIQDGVGFFQ DRTGRTIIDVGF
Sequences:
>Translated_412_residues MHDRVWRTVRPLTAMIGIVLFWFVIGGLSGCTAAPILGEVSATAERYNPGRDTPLAISYEIGRSALVDIYILDANGQRYD LRRAQPRAAANDPYILRFDGSVPTDDPQVLRRLLPPGQYTLVVAARAADGNDSDERRLPLSIEGDVIAPPEIENLMVWPP VISPNADAIDDVAEFTYRLPVSATVNIEVQAPNGEIIPVVTREEEGPYEQRHVWNGKRPNGSLLEAGVYTYTVRAEDGFG NVVQRQGQITLADVGQPEARIVYSMIAPQRVMLGEVITVTIRVRNTGTVPIRTYGPPSGYEYTTDEVFSSVEDGIYAAQA GGFWRVGMDWDANSGGGPKRYPYRWAISPRPPEEWAKPFVEDFLYPGEEAEIIGRVRILQRETRMGFYVGLIQDGVGFFQ DRTGRTIIDVGF >Mature_412_residues MHDRVWRTVRPLTAMIGIVLFWFVIGGLSGCTAAPILGEVSATAERYNPGRDTPLAISYEIGRSALVDIYILDANGQRYD LRRAQPRAAANDPYILRFDGSVPTDDPQVLRRLLPPGQYTLVVAARAADGNDSDERRLPLSIEGDVIAPPEIENLMVWPP VISPNADAIDDVAEFTYRLPVSATVNIEVQAPNGEIIPVVTREEEGPYEQRHVWNGKRPNGSLLEAGVYTYTVRAEDGFG NVVQRQGQITLADVGQPEARIVYSMIAPQRVMLGEVITVTIRVRNTGTVPIRTYGPPSGYEYTTDEVFSSVEDGIYAAQA GGFWRVGMDWDANSGGGPKRYPYRWAISPRPPEEWAKPFVEDFLYPGEEAEIIGRVRILQRETRMGFYVGLIQDGVGFFQ DRTGRTIIDVGF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45706; Mature: 45706
Theoretical pI: Translated: 4.56; Mature: 4.56
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHDRVWRTVRPLTAMIGIVLFWFVIGGLSGCTAAPILGEVSATAERYNPGRDTPLAISYE CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEEE IGRSALVDIYILDANGQRYDLRRAQPRAAANDPYILRFDGSVPTDDPQVLRRLLPPGQYT CCCCEEEEEEEECCCCCEEECCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHCCCCCEE LVVAARAADGNDSDERRLPLSIEGDVIAPPEIENLMVWPPVISPNADAIDDVAEFTYRLP EEEEEECCCCCCCCCCCCCEEECCCEECCCCCCCEEEECCCCCCCCCHHHHHHHHEEECC VSATVNIEVQAPNGEIIPVVTREEEGPYEQRHVWNGKRPNGSLLEAGVYTYTVRAEDGFG CEEEEEEEEECCCCCEEEEEECCCCCCHHHHHCCCCCCCCCCEEECCEEEEEEEECCCCC NVVQRQGQITLADVGQPEARIVYSMIAPQRVMLGEVITVTIRVRNTGTVPIRTYGPPSGY HHHHCCCCEEEEECCCCHHEEEEEHHCCCHHEECEEEEEEEEEECCCCEEEEECCCCCCC EYTTDEVFSSVEDGIYAAQAGGFWRVGMDWDANSGGGPKRYPYRWAISPRPPEEWAKPFV CCCHHHHHHHHHCCEEEECCCCEEEEECCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHH EDFLYPGEEAEIIGRVRILQRETRMGFYVGLIQDGVGFFQDRTGRTIIDVGF HHHCCCCCHHHHHHHHHHHHHHHCCEEEEEEHHCCCHHHHCCCCCEEEEECC >Mature Secondary Structure MHDRVWRTVRPLTAMIGIVLFWFVIGGLSGCTAAPILGEVSATAERYNPGRDTPLAISYE CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEEE IGRSALVDIYILDANGQRYDLRRAQPRAAANDPYILRFDGSVPTDDPQVLRRLLPPGQYT CCCCEEEEEEEECCCCCEEECCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHCCCCCEE LVVAARAADGNDSDERRLPLSIEGDVIAPPEIENLMVWPPVISPNADAIDDVAEFTYRLP EEEEEECCCCCCCCCCCCCEEECCCEECCCCCCCEEEECCCCCCCCCHHHHHHHHEEECC VSATVNIEVQAPNGEIIPVVTREEEGPYEQRHVWNGKRPNGSLLEAGVYTYTVRAEDGFG CEEEEEEEEECCCCCEEEEEECCCCCCHHHHHCCCCCCCCCCEEECCEEEEEEEECCCCC NVVQRQGQITLADVGQPEARIVYSMIAPQRVMLGEVITVTIRVRNTGTVPIRTYGPPSGY HHHHCCCCEEEEECCCCHHEEEEEHHCCCHHEECEEEEEEEEEECCCCEEEEECCCCCCC EYTTDEVFSSVEDGIYAAQAGGFWRVGMDWDANSGGGPKRYPYRWAISPRPPEEWAKPFV CCCHHHHHHHHHCCEEEECCCCEEEEECCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHH EDFLYPGEEAEIIGRVRILQRETRMGFYVGLIQDGVGFFQDRTGRTIIDVGF HHHCCCCCHHHHHHHHHHHHHHHCCEEEEEEHHCCCHHHHCCCCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA