| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is srlE [H]
Identifier: 222524725
GI number: 222524725
Start: 1838887
End: 1839420
Strand: Reverse
Name: srlE [H]
Synonym: Chy400_1452
Alternate gene names: 222524725
Gene position: 1839420-1838887 (Counterclockwise)
Preceding gene: 222524726
Following gene: 222524724
Centisome position: 34.91
GC content: 49.63
Gene sequence:
>534_bases ATGGAGGGTATAACAAAGCTGTTAGAGCGCATCGGTCGCGGAGCGGGAAAAGTAGTCGGTGTGCTCTACCAATCAGGGCG AGAAGCTATCGATCAGGTTGTGAAAAATATCCTGCCCTTCATGGCATTTATCTCTTTCATTATCGGTGTTATTCTCGCCA CCGGCATTGGCGATATTTTGGCGCGAGCCTTGCAACCACTGGCTACAAATCCTGTAGGCCTGGTTATTATGTCACTTATA ATCGGTTTGCCGGTACTATCGCCACTTCTCGGTCCAGGTGCCGTGATTGCCCAGATTATAGGCACGTTATTAGGAACTCA GTTTGCCAGCCAGGCACTCCCGGCATATGTTGCCTTGCCTGCTTTATTTGCTATCAACCCACAAGTAGGATGCGATTTTA TCCCTGTTGGTCTGGCATTAGGTGAAGCTGAGCCTGAGACGGTCGAAGTTGGGGTGCCGGCAGTACTGTTCTCTCGACTT ATTACCGGTCCTATTGCTGTCATCATCGCTTGGATCTTCAGCGTTGGTCTTTGA
Upstream 100 bases:
>100_bases TTGGCTTAATTGTCATCTTCATTCGTGGTCTTGTTACTGAGCGAATAACTGCATTCCTGTTGGCACGACGTGTAGCCTAT GCGGCTTAGGAGGTAAGGCG
Downstream 100 bases:
>100_bases TCTTTGAAGGGTATGAAGCAACTTTGTCTCAAGCTTCATACCCGAATCAAATCAAGAAAGGAGGATATGTCTATGACTGA GGTGAAAAAGTACCGCAAGG
Product: Protein-N(pi)-phosphohistidine--sugar phosphotransferase
Products: NA
Alternate protein names: EII-Gut; PTS system glucitol/sorbitol-specific EIIB component [H]
Number of amino acids: Translated: 177; Mature: 177
Protein sequence:
>177_residues MEGITKLLERIGRGAGKVVGVLYQSGREAIDQVVKNILPFMAFISFIIGVILATGIGDILARALQPLATNPVGLVIMSLI IGLPVLSPLLGPGAVIAQIIGTLLGTQFASQALPAYVALPALFAINPQVGCDFIPVGLALGEAEPETVEVGVPAVLFSRL ITGPIAVIIAWIFSVGL
Sequences:
>Translated_177_residues MEGITKLLERIGRGAGKVVGVLYQSGREAIDQVVKNILPFMAFISFIIGVILATGIGDILARALQPLATNPVGLVIMSLI IGLPVLSPLLGPGAVIAQIIGTLLGTQFASQALPAYVALPALFAINPQVGCDFIPVGLALGEAEPETVEVGVPAVLFSRL ITGPIAVIIAWIFSVGL >Mature_177_residues MEGITKLLERIGRGAGKVVGVLYQSGREAIDQVVKNILPFMAFISFIIGVILATGIGDILARALQPLATNPVGLVIMSLI IGLPVLSPLLGPGAVIAQIIGTLLGTQFASQALPAYVALPALFAINPQVGCDFIPVGLALGEAEPETVEVGVPAVLFSRL ITGPIAVIIAWIFSVGL
Specific function: The phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. This
COG id: COG3732
COG function: function code G; Phosphotransferase system sorbitol-specific component IIBC
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PTS EIIB type-5 domain [H]
Homologues:
Organism=Escherichia coli, GI48994905, Length=168, Percent_Identity=58.9285714285714, Blast_Score=198, Evalue=1e-52,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011638 - InterPro: IPR011618 - InterPro: IPR004702 [H]
Pfam domain/function: PF07663 EIIBC-GUT_C; PF03612 EIIBC-GUT_N [H]
EC number: =2.7.1.69 [H]
Molecular weight: Translated: 18260; Mature: 18260
Theoretical pI: Translated: 4.67; Mature: 4.67
Prosite motif: PS51102 PTS_EIIB_TYPE_5
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEGITKLLERIGRGAGKVVGVLYQSGREAIDQVVKNILPFMAFISFIIGVILATGIGDIL CCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ARALQPLATNPVGLVIMSLIIGLPVLSPLLGPGAVIAQIIGTLLGTQFASQALPAYVALP HHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH ALFAINPQVGCDFIPVGLALGEAEPETVEVGVPAVLFSRLITGPIAVIIAWIFSVGL HHHHCCCCCCCCHHHHHHHHCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MEGITKLLERIGRGAGKVVGVLYQSGREAIDQVVKNILPFMAFISFIIGVILATGIGDIL CCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ARALQPLATNPVGLVIMSLIIGLPVLSPLLGPGAVIAQIIGTLLGTQFASQALPAYVALP HHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH ALFAINPQVGCDFIPVGLALGEAEPETVEVGVPAVLFSRLITGPIAVIIAWIFSVGL HHHHCCCCCCCCHHHHHHHHCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9435786 [H]