| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is yfiL [H]
Identifier: 222524306
GI number: 222524306
Start: 1307439
End: 1308050
Strand: Reverse
Name: yfiL [H]
Synonym: Chy400_1029
Alternate gene names: 222524306
Gene position: 1308050-1307439 (Counterclockwise)
Preceding gene: 222524307
Following gene: 222524305
Centisome position: 24.83
GC content: 56.21
Gene sequence:
>612_bases ATGCAACTACGTGTCACACAACTCAGCGCCAGCTACGGTATTCGCACCATCTTGCGCGGAATCAGCTTTGAACTCCAGCG CGGTGAAGTCCTGGTCGTCAGTGGGCCAAACGGAAGTGGTAAAAGCACGCTGTTGCGTATCCTGGCCGGTCTCCAGATGC CTGCAAGTGGAAGTGTGTCCTATACAGTCGGCGATCATCAGCTTGATCCTCGCGATATGCGCCACCTTATCGGTTGGGTT GCCCCCGACCTGTCACTTTACCGGGAACTGAGTGGGATCGAAAACTTGCGCTTCTTTGCCGATGTCCGTGGGTTAGCCAT ATCCGATGCTGAACTTCACGATCTGCTCAGGCGAGTGGGTCTGGGCGAGCGTGGTCATGATCGGTTGGCGGCCTACTCAT CGGGTATGACGCAGCGGTTACGCTACGCTTTTGCCCTGCTTCATCGGCCACCGGTGCTCTTACTCGATGAACCAACCGTG ACCCTTGACGAACGGGGCACAGCGTTTGTCGAACAGATTATTACCGACCAGCGCCAACGCGGGCTGACCGTCATTGCCAC CAATGACCCACGTGAGTTGCGGTATGCCGACCTGCTGCTGAAGTTATATTAG
Upstream 100 bases:
>100_bases TGCGGCGTGCAGACATACTCCTGGTGTACGGGCTGGTATAATCGTATATAGCACTCTGACACCTGTCGGAGTATCGTGCC GGAGATACGACCCACAGCAT
Downstream 100 bases:
>100_bases AGCACGAAGACAGAACTGTATGGCTGAGTCAATTGACACCGAGGCACAATCGTCCTCGTATACAATGCCCCAGGCTGGTG GCACAATCGCAACGCTCCGT
Product: heme exporter protein CcmA
Products: ADP; phosphate; L-glutamine [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 203; Mature: 203
Protein sequence:
>203_residues MQLRVTQLSASYGIRTILRGISFELQRGEVLVVSGPNGSGKSTLLRILAGLQMPASGSVSYTVGDHQLDPRDMRHLIGWV APDLSLYRELSGIENLRFFADVRGLAISDAELHDLLRRVGLGERGHDRLAAYSSGMTQRLRYAFALLHRPPVLLLDEPTV TLDERGTAFVEQIITDQRQRGLTVIATNDPRELRYADLLLKLY
Sequences:
>Translated_203_residues MQLRVTQLSASYGIRTILRGISFELQRGEVLVVSGPNGSGKSTLLRILAGLQMPASGSVSYTVGDHQLDPRDMRHLIGWV APDLSLYRELSGIENLRFFADVRGLAISDAELHDLLRRVGLGERGHDRLAAYSSGMTQRLRYAFALLHRPPVLLLDEPTV TLDERGTAFVEQIITDQRQRGLTVIATNDPRELRYADLLLKLY >Mature_203_residues MQLRVTQLSASYGIRTILRGISFELQRGEVLVVSGPNGSGKSTLLRILAGLQMPASGSVSYTVGDHQLDPRDMRHLIGWV APDLSLYRELSGIENLRFFADVRGLAISDAELHDLLRRVGLGERGHDRLAAYSSGMTQRLRYAFALLHRPPVLLLDEPTV TLDERGTAFVEQIITDQRQRGLTVIATNDPRELRYADLLLKLY
Specific function: Part Of The Binding-Protein-Dependent Transport System For Glutamine. Probably Responsible For Energy Coupling To The Transport System. [C]
COG id: COG1131
COG function: function code V; ABC-type multidrug transport system, ATPase component
Gene ontology:
Cell location: Inner Membrane-Associated [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transporter domain [H]
Homologues:
Organism=Homo sapiens, GI27477115, Length=172, Percent_Identity=33.7209302325581, Blast_Score=83, Evalue=1e-16, Organism=Homo sapiens, GI27436953, Length=175, Percent_Identity=33.1428571428571, Blast_Score=82, Evalue=2e-16, Organism=Homo sapiens, GI153792144, Length=183, Percent_Identity=30.6010928961749, Blast_Score=79, Evalue=2e-15, Organism=Homo sapiens, GI27881501, Length=175, Percent_Identity=30.8571428571429, Blast_Score=78, Evalue=4e-15, Organism=Homo sapiens, GI30795238, Length=175, Percent_Identity=30.8571428571429, Blast_Score=78, Evalue=5e-15, Organism=Homo sapiens, GI42741659, Length=195, Percent_Identity=29.7435897435897, Blast_Score=77, Evalue=9e-15, Organism=Homo sapiens, GI46592978, Length=195, Percent_Identity=29.2307692307692, Blast_Score=77, Evalue=1e-14, Organism=Homo sapiens, GI46592971, Length=195, Percent_Identity=29.2307692307692, Blast_Score=77, Evalue=1e-14, Organism=Homo sapiens, GI46592956, Length=195, Percent_Identity=29.2307692307692, Blast_Score=77, Evalue=1e-14, Organism=Homo sapiens, GI46592964, Length=195, Percent_Identity=29.2307692307692, Blast_Score=77, Evalue=1e-14, Organism=Homo sapiens, GI46592898, Length=195, Percent_Identity=29.2307692307692, Blast_Score=77, Evalue=1e-14, Organism=Homo sapiens, GI215820660, Length=195, Percent_Identity=28.7179487179487, Blast_Score=77, Evalue=2e-14, Organism=Homo sapiens, GI20143975, Length=195, Percent_Identity=28.7179487179487, Blast_Score=77, Evalue=2e-14, Organism=Homo sapiens, GI27262624, Length=178, Percent_Identity=28.6516853932584, Blast_Score=76, Evalue=2e-14, Organism=Homo sapiens, GI27262626, Length=178, Percent_Identity=28.6516853932584, Blast_Score=76, Evalue=2e-14, Organism=Homo sapiens, GI46592915, Length=197, Percent_Identity=28.9340101522843, Blast_Score=76, Evalue=2e-14, Organism=Homo sapiens, GI116734710, Length=203, Percent_Identity=28.5714285714286, Blast_Score=75, Evalue=5e-14, Organism=Homo sapiens, GI31657092, Length=190, Percent_Identity=30, Blast_Score=74, Evalue=9e-14, Organism=Homo sapiens, GI148612844, Length=199, Percent_Identity=29.6482412060301, Blast_Score=74, Evalue=1e-13, Organism=Homo sapiens, GI255708477, Length=199, Percent_Identity=29.6482412060301, Blast_Score=74, Evalue=1e-13, Organism=Homo sapiens, GI6005701, Length=158, Percent_Identity=29.746835443038, Blast_Score=73, Evalue=2e-13, Organism=Homo sapiens, GI9961250, Length=200, Percent_Identity=26, Blast_Score=71, Evalue=6e-13, Organism=Homo sapiens, GI21536376, Length=191, Percent_Identity=27.7486910994764, Blast_Score=70, Evalue=1e-12, Organism=Homo sapiens, GI4505771, Length=195, Percent_Identity=27.1794871794872, Blast_Score=69, Evalue=2e-12, Organism=Homo sapiens, GI9961252, Length=195, Percent_Identity=27.1794871794872, Blast_Score=69, Evalue=3e-12, Organism=Homo sapiens, GI171184400, Length=180, Percent_Identity=32.7777777777778, Blast_Score=68, Evalue=5e-12, Organism=Homo sapiens, GI150417984, Length=180, Percent_Identity=28.8888888888889, Blast_Score=67, Evalue=1e-11, Organism=Homo sapiens, GI45446740, Length=198, Percent_Identity=24.7474747474747, Blast_Score=65, Evalue=3e-11, Organism=Homo sapiens, GI47078218, Length=198, Percent_Identity=24.7474747474747, Blast_Score=65, Evalue=3e-11, Organism=Homo sapiens, GI105990541, Length=181, Percent_Identity=27.0718232044199, Blast_Score=64, Evalue=8e-11, Organism=Escherichia coli, GI1787029, Length=194, Percent_Identity=35.5670103092784, Blast_Score=103, Evalue=1e-23, Organism=Escherichia coli, GI87081782, Length=198, Percent_Identity=30.3030303030303, Blast_Score=91, Evalue=4e-20, Organism=Escherichia coli, GI1787089, Length=202, Percent_Identity=34.6534653465347, Blast_Score=87, Evalue=5e-19, Organism=Escherichia coli, GI1788225, Length=180, Percent_Identity=33.3333333333333, Blast_Score=87, Evalue=7e-19, Organism=Escherichia coli, GI1786703, Length=197, Percent_Identity=36.0406091370558, Blast_Score=85, Evalue=3e-18, Organism=Escherichia coli, GI48994943, Length=198, Percent_Identity=32.3232323232323, Blast_Score=84, Evalue=5e-18, Organism=Escherichia coli, GI1786698, Length=194, Percent_Identity=33.5051546391753, Blast_Score=84, Evalue=7e-18, Organism=Escherichia coli, GI1788761, Length=170, Percent_Identity=33.5294117647059, Blast_Score=82, Evalue=3e-17, Organism=Escherichia coli, GI1789873, Length=195, Percent_Identity=30.2564102564103, Blast_Score=81, Evalue=5e-17, Organism=Escherichia coli, GI1790739, Length=225, Percent_Identity=31.5555555555556, Blast_Score=81, Evalue=5e-17, Organism=Escherichia coli, GI1788165, Length=176, Percent_Identity=36.3636363636364, Blast_Score=81, Evalue=6e-17, Organism=Escherichia coli, GI1787105, Length=196, Percent_Identity=33.1632653061224, Blast_Score=79, Evalue=3e-16, Organism=Escherichia coli, GI1790544, Length=223, Percent_Identity=29.1479820627803, Blast_Score=77, Evalue=1e-15, Organism=Escherichia coli, GI1786872, Length=190, Percent_Identity=34.2105263157895, Blast_Score=76, Evalue=1e-15, Organism=Escherichia coli, GI1789672, Length=183, Percent_Identity=29.5081967213115, Blast_Score=76, Evalue=1e-15, Organism=Escherichia coli, GI1789991, Length=192, Percent_Identity=27.6041666666667, Blast_Score=75, Evalue=3e-15, Organism=Escherichia coli, GI1790534, Length=191, Percent_Identity=30.8900523560209, Blast_Score=74, Evalue=6e-15, Organism=Escherichia coli, GI1786319, Length=198, Percent_Identity=28.7878787878788, Blast_Score=74, Evalue=6e-15, Organism=Escherichia coli, GI87081834, Length=169, Percent_Identity=29.585798816568, Blast_Score=74, Evalue=8e-15, Organism=Escherichia coli, GI1786253, Length=145, Percent_Identity=32.4137931034483, Blast_Score=72, Evalue=3e-14, Organism=Escherichia coli, GI1790525, Length=192, Percent_Identity=28.125, Blast_Score=72, Evalue=3e-14, Organism=Escherichia coli, GI1787712, Length=157, Percent_Identity=33.1210191082803, Blast_Score=72, Evalue=3e-14, Organism=Escherichia coli, GI1790467, Length=169, Percent_Identity=30.7692307692308, Blast_Score=70, Evalue=7e-14, Organism=Escherichia coli, GI1786563, Length=170, Percent_Identity=34.1176470588235, Blast_Score=70, Evalue=1e-13, Organism=Escherichia coli, GI87081791, Length=194, Percent_Identity=28.8659793814433, Blast_Score=70, Evalue=1e-13, Organism=Escherichia coli, GI1787164, Length=198, Percent_Identity=32.8282828282828, Blast_Score=68, Evalue=4e-13, Organism=Escherichia coli, GI87082268, Length=206, Percent_Identity=30.0970873786408, Blast_Score=68, Evalue=4e-13, Organism=Escherichia coli, GI1788644, Length=205, Percent_Identity=30.7317073170732, Blast_Score=68, Evalue=4e-13, Organism=Escherichia coli, GI87081709, Length=170, Percent_Identity=28.8235294117647, Blast_Score=68, Evalue=5e-13, Organism=Escherichia coli, GI87082267, Length=178, Percent_Identity=29.2134831460674, Blast_Score=68, Evalue=5e-13, Organism=Escherichia coli, GI1790162, Length=206, Percent_Identity=29.6116504854369, Blast_Score=65, Evalue=2e-12, Organism=Escherichia coli, GI1789032, Length=170, Percent_Identity=30.5882352941176, Blast_Score=64, Evalue=7e-12, Organism=Escherichia coli, GI1786398, Length=184, Percent_Identity=30.4347826086957, Blast_Score=64, Evalue=7e-12, Organism=Escherichia coli, GI1786803, Length=215, Percent_Identity=27.906976744186, Blast_Score=64, Evalue=9e-12, Organism=Escherichia coli, GI1789751, Length=206, Percent_Identity=31.5533980582524, Blast_Score=63, Evalue=2e-11, Organism=Escherichia coli, GI48995001, Length=200, Percent_Identity=27.5, Blast_Score=63, Evalue=2e-11, Organism=Escherichia coli, GI1787370, Length=190, Percent_Identity=28.4210526315789, Blast_Score=62, Evalue=3e-11, Organism=Escherichia coli, GI1788506, Length=204, Percent_Identity=29.4117647058824, Blast_Score=62, Evalue=3e-11, Organism=Escherichia coli, GI1789593, Length=191, Percent_Identity=27.2251308900524, Blast_Score=61, Evalue=5e-11, Organism=Escherichia coli, GI2367384, Length=170, Percent_Identity=32.3529411764706, Blast_Score=61, Evalue=6e-11, Organism=Caenorhabditis elegans, GI25146777, Length=202, Percent_Identity=29.2079207920792, Blast_Score=79, Evalue=1e-15, Organism=Caenorhabditis elegans, GI17565586, Length=179, Percent_Identity=26.2569832402235, Blast_Score=77, Evalue=7e-15, Organism=Caenorhabditis elegans, GI115533608, Length=181, Percent_Identity=27.6243093922652, Blast_Score=76, Evalue=1e-14, Organism=Caenorhabditis elegans, GI17558664, Length=210, Percent_Identity=26.6666666666667, Blast_Score=72, Evalue=1e-13, Organism=Caenorhabditis elegans, GI71996809, Length=197, Percent_Identity=28.4263959390863, Blast_Score=72, Evalue=2e-13, Organism=Caenorhabditis elegans, GI193211015, Length=197, Percent_Identity=28.4263959390863, Blast_Score=72, Evalue=2e-13, Organism=Caenorhabditis elegans, GI193211017, Length=197, Percent_Identity=28.4263959390863, Blast_Score=72, Evalue=3e-13, Organism=Caenorhabditis elegans, GI71983523, Length=174, Percent_Identity=28.1609195402299, Blast_Score=71, Evalue=4e-13, Organism=Caenorhabditis elegans, GI71983516, Length=174, Percent_Identity=28.1609195402299, Blast_Score=71, Evalue=5e-13, Organism=Caenorhabditis elegans, GI71983510, Length=174, Percent_Identity=28.1609195402299, Blast_Score=71, Evalue=5e-13, Organism=Caenorhabditis elegans, GI17541710, Length=181, Percent_Identity=29.8342541436464, Blast_Score=70, Evalue=7e-13, Organism=Caenorhabditis elegans, GI193209708, Length=186, Percent_Identity=31.7204301075269, Blast_Score=69, Evalue=1e-12, Organism=Caenorhabditis elegans, GI193202349, Length=178, Percent_Identity=31.4606741573034, Blast_Score=69, Evalue=2e-12, Organism=Caenorhabditis elegans, GI17510237, Length=179, Percent_Identity=26.8156424581006, Blast_Score=68, Evalue=4e-12, Organism=Caenorhabditis elegans, GI17543740, Length=180, Percent_Identity=28.3333333333333, Blast_Score=66, Evalue=1e-11, Organism=Caenorhabditis elegans, GI71992290, Length=183, Percent_Identity=29.5081967213115, Blast_Score=66, Evalue=1e-11, Organism=Caenorhabditis elegans, GI212646699, Length=197, Percent_Identity=28.9340101522843, Blast_Score=65, Evalue=2e-11, Organism=Saccharomyces cerevisiae, GI6324498, Length=208, Percent_Identity=30.2884615384615, Blast_Score=74, Evalue=1e-14, Organism=Drosophila melanogaster, GI24666092, Length=189, Percent_Identity=30.1587301587302, Blast_Score=90, Evalue=1e-18, Organism=Drosophila melanogaster, GI28574744, Length=188, Percent_Identity=31.3829787234043, Blast_Score=84, Evalue=9e-17, Organism=Drosophila melanogaster, GI28571209, Length=189, Percent_Identity=31.7460317460317, Blast_Score=82, Evalue=3e-16, Organism=Drosophila melanogaster, GI85816269, Length=195, Percent_Identity=30.2564102564103, Blast_Score=80, Evalue=1e-15, Organism=Drosophila melanogaster, GI24580553, Length=195, Percent_Identity=30.2564102564103, Blast_Score=80, Evalue=1e-15, Organism=Drosophila melanogaster, GI161076682, Length=181, Percent_Identity=31.4917127071823, Blast_Score=79, Evalue=1e-15, Organism=Drosophila melanogaster, GI161076684, Length=181, Percent_Identity=31.4917127071823, Blast_Score=79, Evalue=1e-15, Organism=Drosophila melanogaster, GI24581617, Length=181, Percent_Identity=31.4917127071823, Blast_Score=79, Evalue=1e-15, Organism=Drosophila melanogaster, GI24581615, Length=181, Percent_Identity=31.4917127071823, Blast_Score=79, Evalue=1e-15, Organism=Drosophila melanogaster, GI85724864, Length=195, Percent_Identity=30.2564102564103, Blast_Score=79, Evalue=2e-15, Organism=Drosophila melanogaster, GI24580555, Length=195, Percent_Identity=30.2564102564103, Blast_Score=79, Evalue=2e-15, Organism=Drosophila melanogaster, GI221500419, Length=193, Percent_Identity=30.5699481865285, Blast_Score=77, Evalue=8e-15, Organism=Drosophila melanogaster, GI19920532, Length=196, Percent_Identity=28.0612244897959, Blast_Score=73, Evalue=1e-13, Organism=Drosophila melanogaster, GI24580930, Length=196, Percent_Identity=28.0612244897959, Blast_Score=73, Evalue=1e-13, Organism=Drosophila melanogaster, GI28573571, Length=193, Percent_Identity=27.4611398963731, Blast_Score=72, Evalue=2e-13, Organism=Drosophila melanogaster, GI28573573, Length=193, Percent_Identity=27.4611398963731, Blast_Score=72, Evalue=2e-13, Organism=Drosophila melanogaster, GI24643674, Length=163, Percent_Identity=26.9938650306748, Blast_Score=72, Evalue=2e-13, Organism=Drosophila melanogaster, GI221512771, Length=188, Percent_Identity=25, Blast_Score=72, Evalue=4e-13, Organism=Drosophila melanogaster, GI116007184, Length=200, Percent_Identity=27.5, Blast_Score=71, Evalue=5e-13, Organism=Drosophila melanogaster, GI221500365, Length=200, Percent_Identity=27.5, Blast_Score=71, Evalue=6e-13, Organism=Drosophila melanogaster, GI24648314, Length=192, Percent_Identity=25, Blast_Score=70, Evalue=1e-12, Organism=Drosophila melanogaster, GI281363262, Length=206, Percent_Identity=30.5825242718447, Blast_Score=69, Evalue=2e-12, Organism=Drosophila melanogaster, GI24653245, Length=206, Percent_Identity=30.5825242718447, Blast_Score=69, Evalue=2e-12, Organism=Drosophila melanogaster, GI28574533, Length=187, Percent_Identity=27.807486631016, Blast_Score=69, Evalue=2e-12, Organism=Drosophila melanogaster, GI116007328, Length=170, Percent_Identity=26.4705882352941, Blast_Score=69, Evalue=2e-12, Organism=Drosophila melanogaster, GI28574150, Length=170, Percent_Identity=26.4705882352941, Blast_Score=69, Evalue=2e-12, Organism=Drosophila melanogaster, GI24643672, Length=194, Percent_Identity=25.7731958762887, Blast_Score=67, Evalue=1e-11, Organism=Drosophila melanogaster, GI24581191, Length=180, Percent_Identity=27.2222222222222, Blast_Score=67, Evalue=1e-11, Organism=Drosophila melanogaster, GI24581189, Length=180, Percent_Identity=27.2222222222222, Blast_Score=67, Evalue=1e-11, Organism=Drosophila melanogaster, GI24581193, Length=180, Percent_Identity=27.2222222222222, Blast_Score=67, Evalue=1e-11, Organism=Drosophila melanogaster, GI24581195, Length=180, Percent_Identity=27.2222222222222, Blast_Score=67, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003439 - InterPro: IPR017871 - InterPro: IPR003593 [H]
Pfam domain/function: PF00005 ABC_tran [H]
EC number: NA
Molecular weight: Translated: 22666; Mature: 22666
Theoretical pI: Translated: 8.84; Mature: 8.84
Prosite motif: PS50893 ABC_TRANSPORTER_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQLRVTQLSASYGIRTILRGISFELQRGEVLVVSGPNGSGKSTLLRILAGLQMPASGSVS CCEEEEEHHHHHHHHHHHHHHCEEECCCCEEEEECCCCCCHHHHHHHHHHCCCCCCCCEE YTVGDHQLDPRDMRHLIGWVAPDLSLYRELSGIENLRFFADVRGLAISDAELHDLLRRVG EEECCCCCCHHHHHHHHHHHCCCHHHHHHHHCHHHHHHHHHHCCCEECHHHHHHHHHHHC LGERGHDRLAAYSSGMTQRLRYAFALLHRPPVLLLDEPTVTLDERGTAFVEQIITDQRQR CCCCCCHHHHHHHCCHHHHHHHHHHHHCCCCEEEECCCCEEECCCCHHHHHHHHHHHHHC GLTVIATNDPRELRYADLLLKLY CEEEEECCCCHHHHHHHHHHHCC >Mature Secondary Structure MQLRVTQLSASYGIRTILRGISFELQRGEVLVVSGPNGSGKSTLLRILAGLQMPASGSVS CCEEEEEHHHHHHHHHHHHHHCEEECCCCEEEEECCCCCCHHHHHHHHHHCCCCCCCCEE YTVGDHQLDPRDMRHLIGWVAPDLSLYRELSGIENLRFFADVRGLAISDAELHDLLRRVG EEECCCCCCHHHHHHHHHHHCCCHHHHHHHHCHHHHHHHHHHCCCEECHHHHHHHHHHHC LGERGHDRLAAYSSGMTQRLRYAFALLHRPPVLLLDEPTVTLDERGTAFVEQIITDQRQR CCCCCCHHHHHHHCCHHHHHHHHHHHHCCCCEEEECCCCEEECCCCHHHHHHHHHHHHHC GLTVIATNDPRELRYADLLLKLY CEEEEECCCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-glutamine [Periplasm]; H2O [C]
Specific reaction: ATP + L-glutamine [Periplasm] + H2O = ADP + phosphate + L-glutamine [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8973323; 9384377 [H]