Click here to switch to the map view.

The map label for this gene is 222524305

Identifier: 222524305

GI number: 222524305

Start: 1306670

End: 1307419

Strand: Reverse

Name: 222524305

Synonym: Chy400_1028

Alternate gene names: NA

Gene position: 1307419-1306670 (Counterclockwise)

Preceding gene: 222524306

Following gene: 222524304

Centisome position: 24.81

GC content: 56.0

Gene sequence:

>750_bases
ATGGCTGAGTCAATTGACACCGAGGCACAATCGTCCTCGTATACAATGCCCCAGGCTGGTGGCACAATCGCAACGCTCCG
TGCGGCCTGGGCAATTTTTCGCAAAGACATTGCCTGTGAACTCAGGACACGCTACGCCATCAACACCCTTCTCCTCTTTG
CGGTCAGTGCAGCAACTGCGGTCAGCCTCGGCGTAGGCTTTCTCGGTTTGCGCCGTACCGAAGAGGCACTCTTGATCCAA
TCGGCCCTGCTTTGGGTTGCCATTCTCTTTGCTGCCCTGAATGGACTTTCCCGCAGCTTTGTTTACGAAGAGGAGACACG
AACCCTCACCGCATTACGTCTGGCAGCCTCGCCAACCGCGGTGTTTCTGGGCAAATTCTGCTTTAACCTGACGCTCGTGC
TGATCCTCGATCTGGTAACCAGTCTGCTCTTTATCGTCTTGTTGCGCGTCCAGGTCGGTAGCCCACTTGCCTTCAGTGCA
ATGCTGGCGACCGGAGGATTGGCGTTAACCTCGGCAACCACCATCATTGCGGCCATTATTGCCCGCGCCAGCTTCAAAAA
TGCTCTCTTCGCGGTACTGGCGTTCCCGCTCCTCGTTGCACCCCTGATCGTTGCCATCCAGGGCACTGCGCAAACGCTTG
AAAACGTCGCCTTTGATGTTGTCCTTGGCCCGATCCGCTTCCTGCTGGCCTACGTCGTGGTCACCTTTACCGCTTCACTG
ATGCTCTTTCCCTTTGTATGGGAGTCTTGA

Upstream 100 bases:

>100_bases
CGCCAACGCGGGCTGACCGTCATTGCCACCAATGACCCACGTGAGTTGCGGTATGCCGACCTGCTGCTGAAGTTATATTA
GAGCACGAAGACAGAACTGT

Downstream 100 bases:

>100_bases
CAGGTGAGTGGAAGTAGTATATTCACCTCACCCTATAGAGCATTGCAGTATAGTGATGGATCGGTTGCCAAAATTGCAGA
TCAGGCGTGCTATCGAAAGC

Product: cytochrome c-type biogenesis protein CcmB

Products: NA

Alternate protein names: Heme Exporter Protein B

Number of amino acids: Translated: 249; Mature: 248

Protein sequence:

>249_residues
MAESIDTEAQSSSYTMPQAGGTIATLRAAWAIFRKDIACELRTRYAINTLLLFAVSAATAVSLGVGFLGLRRTEEALLIQ
SALLWVAILFAALNGLSRSFVYEEETRTLTALRLAASPTAVFLGKFCFNLTLVLILDLVTSLLFIVLLRVQVGSPLAFSA
MLATGGLALTSATTIIAAIIARASFKNALFAVLAFPLLVAPLIVAIQGTAQTLENVAFDVVLGPIRFLLAYVVVTFTASL
MLFPFVWES

Sequences:

>Translated_249_residues
MAESIDTEAQSSSYTMPQAGGTIATLRAAWAIFRKDIACELRTRYAINTLLLFAVSAATAVSLGVGFLGLRRTEEALLIQ
SALLWVAILFAALNGLSRSFVYEEETRTLTALRLAASPTAVFLGKFCFNLTLVLILDLVTSLLFIVLLRVQVGSPLAFSA
MLATGGLALTSATTIIAAIIARASFKNALFAVLAFPLLVAPLIVAIQGTAQTLENVAFDVVLGPIRFLLAYVVVTFTASL
MLFPFVWES
>Mature_248_residues
AESIDTEAQSSSYTMPQAGGTIATLRAAWAIFRKDIACELRTRYAINTLLLFAVSAATAVSLGVGFLGLRRTEEALLIQS
ALLWVAILFAALNGLSRSFVYEEETRTLTALRLAASPTAVFLGKFCFNLTLVLILDLVTSLLFIVLLRVQVGSPLAFSAM
LATGGLALTSATTIIAAIIARASFKNALFAVLAFPLLVAPLIVAIQGTAQTLENVAFDVVLGPIRFLLAYVVVTFTASLM
LFPFVWES

Specific function: Unknown

COG id: COG2386

COG function: function code O; ABC-type transport system involved in cytochrome c biogenesis, permease component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26630; Mature: 26499

Theoretical pI: Translated: 8.19; Mature: 8.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAESIDTEAQSSSYTMPQAGGTIATLRAAWAIFRKDIACELRTRYAINTLLLFAVSAATA
CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VSLGVGFLGLRRTEEALLIQSALLWVAILFAALNGLSRSFVYEEETRTLTALRLAASPTA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHH
VFLGKFCFNLTLVLILDLVTSLLFIVLLRVQVGSPLAFSAMLATGGLALTSATTIIAAII
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHHHH
ARASFKNALFAVLAFPLLVAPLIVAIQGTAQTLENVAFDVVLGPIRFLLAYVVVTFTASL
HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MLFPFVWES
HHHHHHCCC
>Mature Secondary Structure 
AESIDTEAQSSSYTMPQAGGTIATLRAAWAIFRKDIACELRTRYAINTLLLFAVSAATA
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VSLGVGFLGLRRTEEALLIQSALLWVAILFAALNGLSRSFVYEEETRTLTALRLAASPTA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHH
VFLGKFCFNLTLVLILDLVTSLLFIVLLRVQVGSPLAFSAMLATGGLALTSATTIIAAII
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHHHH
ARASFKNALFAVLAFPLLVAPLIVAIQGTAQTLENVAFDVVLGPIRFLLAYVVVTFTASL
HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MLFPFVWES
HHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA