| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is 222524307
Identifier: 222524307
GI number: 222524307
Start: 1308820
End: 1311264
Strand: Reverse
Name: 222524307
Synonym: Chy400_1030
Alternate gene names: NA
Gene position: 1311264-1308820 (Counterclockwise)
Preceding gene: 222524308
Following gene: 222524306
Centisome position: 24.89
GC content: 57.46
Gene sequence:
>2445_bases ATGAAACACTTTCACCGCCTACTCCTGATCACGCTGATCGGTATGATCATCGTGGCCGCACTCCTGCGGGATGCTCGATT ACCGGTTGCAGCTCAACCCTTGACCGGCGGACTGATAACGGAAACGCTTGCCGGGGATGCGGTACAGGTAATGATGCCCG GACGGTTCGCTCTCACCTTTACACCAGACGGGATCGAGGTATGGCGCGACCTGCGGCGCGATCCAGCCGGTCACCGCAAT CTGGTTAATCAATCAACACCACTTCTGGTGCCCCAGCTTGCCGACGGCCAGCAAGTGGTCGGCAGGCCAACACTGGTACG TAGTTCATCATTACGCGCCGTGATTTCGTACACCTACGCCGGCACCACAATCAGTTATGAGGTGTGGGCCGGCGGTCAGA TACTGATCAGCGCCAGTGGTCAGCGCGTTACGCTCTCTGGCCCTCACCTGACCGGCGATGCCAGTGCCGGAGCGGCGCTG CAAGCGATTAAATCGACATCCACTGCTCAATACTGGGTACTCTATCTCGATGCCTGGGCCGTTGATGAACTACCGCTCGC CTTGTCCGATCCGGCAATGGTCGCCGTCACCTCACCTGATAATGTGAGCTTATCCGCGAATGGTTCGGTCGCGATAACCC CACCTGACGGTGTGGTGCGGGCGCCACGGCTCCGCATCAAGAACTGGTCTGGCGGCGAGGCGGTTACAGTCGAGCGAGCC GGGGTGACCCTGGCTGAAGGTATTGATTATCTGACCGAGTATGATCCTGTCAGTGGTGATCTCCTCGTGCAATATTTGCA TCTCCTGCCACCTGGCCCGGCAGCCAGCCGCACCTTCCAGATTCGTCCATCTCAGGCCGAACCGGTCTTGAGTCTGGCTA TTCTCGATGCTAACGGCAATCCCCGACCCCTTGATCCGGTTACCGGTATGCTGATCGTCGATGCCGATCTCCCCGCCGGG CAGTCGCCGGCACCTGGCCCGTTAACGACGAGAGATGTCTTCCAGATTCCGTACATTCAAACCGGGCCAACGCTACGCTT GCAGGCGACCGTCACCGATCCGCCGGCTGAGTTCAGTGGTGTCCGCTTTACCATCAGTGGCCCCGGTTTTAATCAAACGA TTGACGATCTCACACCCGGCGATGGTCTTACCGCGACCGTTACCCTGCCGCGCCGCGCCGAGTACAGTGTCTCGGCGACG ATCCTGATCAACGGCGAACCGGGATCGCTTAGCCGGACTATCGATCCGGTCGGTTACGGGTATGTGTTCGTGAGCATTGG CGACTCGATCACCGCAGGGAAATGGGGTTTCTATCGTCTGCCGCCAGGTTCAAGCCTCACCGGTGCGAGTGATGGCTATC CGTTTACCAGCCCGCCACCGGTTGGCAGCGGCTACCCGCGCAGCGATGATGGCCGTAACTATCCCCAATCGGATAACACG CAGGCCGATAGTGCCGGCTATCAGAACATCTACTATGCCGGCTATCAGATAGAATTGAATAATTTGCTGACAACCTGCCT CAACAGCCCGGTATTCATCCTCAACGATGGCTTTAGCGGTATTCGTACCGCACGCGATCTCTACGGTAATACCACCGGAT CAGACCGGATTGGGGCAAGTGGCTACCTGAATGCGCTCGGCAAAGCGACGGTGTACCGGCAGCATATCACCGATCTGGGG GCTGGGCAGGTATTGCTGCAAGTTGGTACCAATGATGCCACGGCAGTTTCGACAACGAATATCTACAACAACCTGATGCC GGCCAGTGTCTATAAAGAAGATCTGCGCGCTCTGATCAATGCCATTCGCCTGGATCGTCCCGATCTCGGATTGTGGGTTG CGCGTCTCCCGTGGCGAAATGACGGCACAACTACCCAGGCTAATACTCGCCGTGCCACAACACAGTCATTTAACCTTAGC ATTGCTGAACTGGTCGATGAACTCGACGACGAGGCACCGGTTCGCTTAGGGCCAGATTTTTATACCCACTTTGCCAATTA TCAAGATCAGATTATTACCACGAATCCCAGTAACGGCAATGCCGACAACATTCACCCGAATAGTGCGGGCTTCAGCGCGA TGGCCGATCTATGGAGTGATGTGCTTTGCGCCGATCTACCTCGTGAACCCGATCCATCACCGACGCCGACCAGCACTATC TACATTCCAACTGTCACCAATACGTCTTCACCAACACCCAGCAGTGTTATTACGACCACGAGTAGCCCAACCGCGACTTC CACCCCAACTGCGACCACCAGCCCAACGGTGACAGGTAGCCCGACCGCGACCACCAGCCCAACGGCGACAGGTAGCCCAA CTGCGACCACCGGCCCGACGGCGACCACCAGCCCAACAGTAACGGTCAGCCCGACCGCAACTCAGACCGGTTCACCGGTA CAGGCACCGGGAAGCTCCATCTACATCCCAATCATCAATAGATGA
Upstream 100 bases:
>100_bases TGTAAGGATGCGCGGAAGGTGTGTTCTGTCCGTTTTGTGTGAGAGCCGGTCTTGCTATCAGGTGTGAACGCAGTATCAGA CTGTTGCAACAGGTTGCCAT
Downstream 100 bases:
>100_bases TGATGCGGCGGGATGCTGTGGTGTGACTGTACAACTTATTTCACAAAAGCTGTGCTGTCGTGCTCCCAGCCTGCCGGTAT GGTAGCGGGGAGTGCTGACG
Product: G-D-S-L family lipolytic protein
Products: NA
Alternate protein names: G-D-S-L Family Lipolytic Protein
Number of amino acids: Translated: 814; Mature: 814
Protein sequence:
>814_residues MKHFHRLLLITLIGMIIVAALLRDARLPVAAQPLTGGLITETLAGDAVQVMMPGRFALTFTPDGIEVWRDLRRDPAGHRN LVNQSTPLLVPQLADGQQVVGRPTLVRSSSLRAVISYTYAGTTISYEVWAGGQILISASGQRVTLSGPHLTGDASAGAAL QAIKSTSTAQYWVLYLDAWAVDELPLALSDPAMVAVTSPDNVSLSANGSVAITPPDGVVRAPRLRIKNWSGGEAVTVERA GVTLAEGIDYLTEYDPVSGDLLVQYLHLLPPGPAASRTFQIRPSQAEPVLSLAILDANGNPRPLDPVTGMLIVDADLPAG QSPAPGPLTTRDVFQIPYIQTGPTLRLQATVTDPPAEFSGVRFTISGPGFNQTIDDLTPGDGLTATVTLPRRAEYSVSAT ILINGEPGSLSRTIDPVGYGYVFVSIGDSITAGKWGFYRLPPGSSLTGASDGYPFTSPPPVGSGYPRSDDGRNYPQSDNT QADSAGYQNIYYAGYQIELNNLLTTCLNSPVFILNDGFSGIRTARDLYGNTTGSDRIGASGYLNALGKATVYRQHITDLG AGQVLLQVGTNDATAVSTTNIYNNLMPASVYKEDLRALINAIRLDRPDLGLWVARLPWRNDGTTTQANTRRATTQSFNLS IAELVDELDDEAPVRLGPDFYTHFANYQDQIITTNPSNGNADNIHPNSAGFSAMADLWSDVLCADLPREPDPSPTPTSTI YIPTVTNTSSPTPSSVITTTSSPTATSTPTATTSPTVTGSPTATTSPTATGSPTATTGPTATTSPTVTVSPTATQTGSPV QAPGSSIYIPIINR
Sequences:
>Translated_814_residues MKHFHRLLLITLIGMIIVAALLRDARLPVAAQPLTGGLITETLAGDAVQVMMPGRFALTFTPDGIEVWRDLRRDPAGHRN LVNQSTPLLVPQLADGQQVVGRPTLVRSSSLRAVISYTYAGTTISYEVWAGGQILISASGQRVTLSGPHLTGDASAGAAL QAIKSTSTAQYWVLYLDAWAVDELPLALSDPAMVAVTSPDNVSLSANGSVAITPPDGVVRAPRLRIKNWSGGEAVTVERA GVTLAEGIDYLTEYDPVSGDLLVQYLHLLPPGPAASRTFQIRPSQAEPVLSLAILDANGNPRPLDPVTGMLIVDADLPAG QSPAPGPLTTRDVFQIPYIQTGPTLRLQATVTDPPAEFSGVRFTISGPGFNQTIDDLTPGDGLTATVTLPRRAEYSVSAT ILINGEPGSLSRTIDPVGYGYVFVSIGDSITAGKWGFYRLPPGSSLTGASDGYPFTSPPPVGSGYPRSDDGRNYPQSDNT QADSAGYQNIYYAGYQIELNNLLTTCLNSPVFILNDGFSGIRTARDLYGNTTGSDRIGASGYLNALGKATVYRQHITDLG AGQVLLQVGTNDATAVSTTNIYNNLMPASVYKEDLRALINAIRLDRPDLGLWVARLPWRNDGTTTQANTRRATTQSFNLS IAELVDELDDEAPVRLGPDFYTHFANYQDQIITTNPSNGNADNIHPNSAGFSAMADLWSDVLCADLPREPDPSPTPTSTI YIPTVTNTSSPTPSSVITTTSSPTATSTPTATTSPTVTGSPTATTSPTATGSPTATTGPTATTSPTVTVSPTATQTGSPV QAPGSSIYIPIINR >Mature_814_residues MKHFHRLLLITLIGMIIVAALLRDARLPVAAQPLTGGLITETLAGDAVQVMMPGRFALTFTPDGIEVWRDLRRDPAGHRN LVNQSTPLLVPQLADGQQVVGRPTLVRSSSLRAVISYTYAGTTISYEVWAGGQILISASGQRVTLSGPHLTGDASAGAAL QAIKSTSTAQYWVLYLDAWAVDELPLALSDPAMVAVTSPDNVSLSANGSVAITPPDGVVRAPRLRIKNWSGGEAVTVERA GVTLAEGIDYLTEYDPVSGDLLVQYLHLLPPGPAASRTFQIRPSQAEPVLSLAILDANGNPRPLDPVTGMLIVDADLPAG QSPAPGPLTTRDVFQIPYIQTGPTLRLQATVTDPPAEFSGVRFTISGPGFNQTIDDLTPGDGLTATVTLPRRAEYSVSAT ILINGEPGSLSRTIDPVGYGYVFVSIGDSITAGKWGFYRLPPGSSLTGASDGYPFTSPPPVGSGYPRSDDGRNYPQSDNT QADSAGYQNIYYAGYQIELNNLLTTCLNSPVFILNDGFSGIRTARDLYGNTTGSDRIGASGYLNALGKATVYRQHITDLG AGQVLLQVGTNDATAVSTTNIYNNLMPASVYKEDLRALINAIRLDRPDLGLWVARLPWRNDGTTTQANTRRATTQSFNLS IAELVDELDDEAPVRLGPDFYTHFANYQDQIITTNPSNGNADNIHPNSAGFSAMADLWSDVLCADLPREPDPSPTPTSTI YIPTVTNTSSPTPSSVITTTSSPTATSTPTATTSPTVTGSPTATTSPTATGSPTATTGPTATTSPTVTVSPTATQTGSPV QAPGSSIYIPIINR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 85895; Mature: 85895
Theoretical pI: Translated: 4.63; Mature: 4.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKHFHRLLLITLIGMIIVAALLRDARLPVAAQPLTGGLITETLAGDAVQVMMPGRFALTF CCHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCHHHHHHCCCEEEEEECCEEEEEE TPDGIEVWRDLRRDPAGHRNLVNQSTPLLVPQLADGQQVVGRPTLVRSSSLRAVISYTYA CCCHHHHHHHHHCCCCCCHHHCCCCCCEEEEECCCCCHHCCCCEEEECCCCEEEEEEEEE GTTISYEVWAGGQILISASGQRVTLSGPHLTGDASAGAALQAIKSTSTAQYWVLYLDAWA CCEEEEEEECCCEEEEEECCCEEEEECCCCCCCCCCCHHHHHHHCCCCCEEEEEEEEEEC VDELPLALSDPAMVAVTSPDNVSLSANGSVAITPPDGVVRAPRLRIKNWSGGEAVTVERA CCCCCEEECCCEEEEEECCCCEEEECCCEEEEECCCCCEECCEEEEECCCCCCEEEEEEC GVTLAEGIDYLTEYDPVSGDLLVQYLHLLPPGPAASRTFQIRPSQAEPVLSLAILDANGN CCCHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCEEEECCCCCCCEEEEEEECCCCC PRPLDPVTGMLIVDADLPAGQSPAPGPLTTRDVFQIPYIQTGPTLRLQATVTDPPAEFSG CCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCEEECCEEECCCCEEEEEEECCCCCCCCC VRFTISGPGFNQTIDDLTPGDGLTATVTLPRRAEYSVSATILINGEPGSLSRTIDPVGYG EEEEEECCCCCCHHHCCCCCCCCEEEEECCCCCCCEEEEEEEEECCCCCCCCEECCCCCC YVFVSIGDSITAGKWGFYRLPPGSSLTGASDGYPFTSPPPVGSGYPRSDDGRNYPQSDNT EEEEEECCCEECCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC QADSAGYQNIYYAGYQIELNNLLTTCLNSPVFILNDGFSGIRTARDLYGNTTGSDRIGAS CCCCCCCCEEEEEEEEEEHHHHHHHHHCCCEEEEECCCHHHHHHHHHCCCCCCCCCCCCC GYLNALGKATVYRQHITDLGAGQVLLQVGTNDATAVSTTNIYNNLMPASVYKEDLRALIN HHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCEEEEHHHHHCCCCHHHHHHHHHHHHH AIRLDRPDLGLWVARLPWRNDGTTTQANTRRATTQSFNLSIAELVDELDDEAPVRLGPDF HHHCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCEECCCCHHHHHHHHCCCCCEEECCHH YTHFANYQDQIITTNPSNGNADNIHPNSAGFSAMADLWSDVLCADLPREPDPSPTPTSTI HHHHCCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCEE YIPTVTNTSSPTPSSVITTTSSPTATSTPTATTSPTVTGSPTATTSPTATGSPTATTGPT EEEEECCCCCCCCCCEEEECCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCC ATTSPTVTVSPTATQTGSPVQAPGSSIYIPIINR CCCCCEEEECCCCCCCCCCCCCCCCEEEEEEECC >Mature Secondary Structure MKHFHRLLLITLIGMIIVAALLRDARLPVAAQPLTGGLITETLAGDAVQVMMPGRFALTF CCHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCHHHHHHCCCEEEEEECCEEEEEE TPDGIEVWRDLRRDPAGHRNLVNQSTPLLVPQLADGQQVVGRPTLVRSSSLRAVISYTYA CCCHHHHHHHHHCCCCCCHHHCCCCCCEEEEECCCCCHHCCCCEEEECCCCEEEEEEEEE GTTISYEVWAGGQILISASGQRVTLSGPHLTGDASAGAALQAIKSTSTAQYWVLYLDAWA CCEEEEEEECCCEEEEEECCCEEEEECCCCCCCCCCCHHHHHHHCCCCCEEEEEEEEEEC VDELPLALSDPAMVAVTSPDNVSLSANGSVAITPPDGVVRAPRLRIKNWSGGEAVTVERA CCCCCEEECCCEEEEEECCCCEEEECCCEEEEECCCCCEECCEEEEECCCCCCEEEEEEC GVTLAEGIDYLTEYDPVSGDLLVQYLHLLPPGPAASRTFQIRPSQAEPVLSLAILDANGN CCCHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCEEEECCCCCCCEEEEEEECCCCC PRPLDPVTGMLIVDADLPAGQSPAPGPLTTRDVFQIPYIQTGPTLRLQATVTDPPAEFSG CCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCEEECCEEECCCCEEEEEEECCCCCCCCC VRFTISGPGFNQTIDDLTPGDGLTATVTLPRRAEYSVSATILINGEPGSLSRTIDPVGYG EEEEEECCCCCCHHHCCCCCCCCEEEEECCCCCCCEEEEEEEEECCCCCCCCEECCCCCC YVFVSIGDSITAGKWGFYRLPPGSSLTGASDGYPFTSPPPVGSGYPRSDDGRNYPQSDNT EEEEEECCCEECCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC QADSAGYQNIYYAGYQIELNNLLTTCLNSPVFILNDGFSGIRTARDLYGNTTGSDRIGAS CCCCCCCCEEEEEEEEEEHHHHHHHHHCCCEEEEECCCHHHHHHHHHCCCCCCCCCCCCC GYLNALGKATVYRQHITDLGAGQVLLQVGTNDATAVSTTNIYNNLMPASVYKEDLRALIN HHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCEEEEHHHHHCCCCHHHHHHHHHHHHH AIRLDRPDLGLWVARLPWRNDGTTTQANTRRATTQSFNLSIAELVDELDDEAPVRLGPDF HHHCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCEECCCCHHHHHHHHCCCCCEEECCHH YTHFANYQDQIITTNPSNGNADNIHPNSAGFSAMADLWSDVLCADLPREPDPSPTPTSTI HHHHCCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCEE YIPTVTNTSSPTPSSVITTTSSPTATSTPTATTSPTVTGSPTATTSPTATGSPTATTGPT EEEEECCCCCCCCCCEEEECCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCC ATTSPTVTVSPTATQTGSPVQAPGSSIYIPIINR CCCCCEEEECCCCCCCCCCCCCCCCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA