| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is mhpC [H]
Identifier: 222524127
GI number: 222524127
Start: 1061871
End: 1062713
Strand: Direct
Name: mhpC [H]
Synonym: Chy400_0843
Alternate gene names: 222524127
Gene position: 1061871-1062713 (Clockwise)
Preceding gene: 222524121
Following gene: 222524129
Centisome position: 20.15
GC content: 65.48
Gene sequence:
>843_bases ATGCGTTCACGCTGGTTACGGATCAACGGCTATCAACTCCACTGGATCGAAGCCGGACAGGGGCCGGCTGTAATCCTCTT ACACGGTTTCGCCGGCTCGTGTGCCGACTGGGAACCAACTGTAGACTGGCTGGCTCGACAGGGGTATCGCGCCTTAGCCG TCGACGCCCTCGGCTTTGGACGCTCAGAAAAGCCGGTCAACGCCCCCTATGGACTGCACTTGCAGAGCGATCTCTACGCC GGTCTCCTGACCGCACTCGGTATCGAGCGTGCCGTCTTCGTAGCGCATTCGATGGGAGGCAAATACGCGCTGGCGACCGC CCTCCGCCATCCCCAACGGATCGCCCGCCTGGTACTGATCGCCACCGACGGCTTCATCAAGCCATCGCCACTCACCATCA TCGGCGGCTGGCCTGTCCTGGGCGAGACCATCCTCTGGCTCTCGGCCCACCCCGCAGTCGTGCGCGCCTTTCTCGCCGCC GCCTTCCACAACCCCGAACCCTACCTCACCGCCGACCTGATCGAGCGCGGTCGGGCCGCCATCAGCGGTACCGCCAATCG CCGTGCCCTCACCGCCCTCAGCCGGCGCTACGCCGCCACCGATCTCACCCTCACCGGCCTGCGCGCACGCCTCGGCGAGC TTCGCGTGCCCACACTGCTCGTCTGGGGCGAACACGACCGCGTCTTCTCGTTCGACTACGCCCGCATTGCCAACCGCGAA ATCCCCGGCTCGCAGCTCGTCGTCATCCCACACTGCGGCCACTTCCCGCACATCGAAGCCGTGCGCCCGTTTCGTGGCCT GCTAAATGGCTTCCTGGCCCCGGTACACTCGAACCCATCGTAA
Upstream 100 bases:
>100_bases GCCGGCAATGAGCAGAAACGCCCTTTTTGCGCTTCATCACTGTCAACCACTCGCCTACCCGTGGTATACTCACTATGGCC TGTGTCTACGAGGAAAAGCG
Downstream 100 bases:
>100_bases ACGCCCCACCATCACCGACTGCGCGTCACCCCAATCCGCGGACAGACCTCACGGATCGGGCAGATACTACACCGCGGCGA CGTAGGGTGACAGATATTCT
Product: alpha/beta hydrolase fold protein
Products: 2-oxopent-4-enoate; succinate [C]
Alternate protein names: 2-hydroxy-6-ketonona-2,4-diene-1,9-dioic acid 5,6-hydrolase; 2-hydroxy-6-oxonona-2,4,7-triene-1,9-dioic acid 5,6-hydrolase; 2-hydroxy-6-oxonona-2,4-diene-1,9-dioic acid 5,6-hydrolase [H]
Number of amino acids: Translated: 280; Mature: 280
Protein sequence:
>280_residues MRSRWLRINGYQLHWIEAGQGPAVILLHGFAGSCADWEPTVDWLARQGYRALAVDALGFGRSEKPVNAPYGLHLQSDLYA GLLTALGIERAVFVAHSMGGKYALATALRHPQRIARLVLIATDGFIKPSPLTIIGGWPVLGETILWLSAHPAVVRAFLAA AFHNPEPYLTADLIERGRAAISGTANRRALTALSRRYAATDLTLTGLRARLGELRVPTLLVWGEHDRVFSFDYARIANRE IPGSQLVVIPHCGHFPHIEAVRPFRGLLNGFLAPVHSNPS
Sequences:
>Translated_280_residues MRSRWLRINGYQLHWIEAGQGPAVILLHGFAGSCADWEPTVDWLARQGYRALAVDALGFGRSEKPVNAPYGLHLQSDLYA GLLTALGIERAVFVAHSMGGKYALATALRHPQRIARLVLIATDGFIKPSPLTIIGGWPVLGETILWLSAHPAVVRAFLAA AFHNPEPYLTADLIERGRAAISGTANRRALTALSRRYAATDLTLTGLRARLGELRVPTLLVWGEHDRVFSFDYARIANRE IPGSQLVVIPHCGHFPHIEAVRPFRGLLNGFLAPVHSNPS >Mature_280_residues MRSRWLRINGYQLHWIEAGQGPAVILLHGFAGSCADWEPTVDWLARQGYRALAVDALGFGRSEKPVNAPYGLHLQSDLYA GLLTALGIERAVFVAHSMGGKYALATALRHPQRIARLVLIATDGFIKPSPLTIIGGWPVLGETILWLSAHPAVVRAFLAA AFHNPEPYLTADLIERGRAAISGTANRRALTALSRRYAATDLTLTGLRARLGELRVPTLLVWGEHDRVFSFDYARIANRE IPGSQLVVIPHCGHFPHIEAVRPFRGLLNGFLAPVHSNPS
Specific function: Catalyzes the cleavage of the C5-C6 bond of 2-hydroxy-6- oxononadienedioate and 2-hydroxy-6-oxononatrienedioate, a dienol ring fission product of the bacterial meta-cleavage pathway for degradation of phenylpropionic acid [H]
COG id: COG0596
COG function: function code R; Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the AB hydrolase superfamily. MhpC family [H]
Homologues:
Organism=Homo sapiens, GI27597073, Length=304, Percent_Identity=25.9868421052632, Blast_Score=80, Evalue=2e-15, Organism=Escherichia coli, GI87081721, Length=271, Percent_Identity=28.4132841328413, Blast_Score=91, Evalue=8e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000073 - InterPro: IPR000639 [H]
Pfam domain/function: PF00561 Abhydrolase_1 [H]
EC number: 3.7.1.- [C]
Molecular weight: Translated: 30664; Mature: 30664
Theoretical pI: Translated: 10.18; Mature: 10.18
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRSRWLRINGYQLHWIEAGQGPAVILLHGFAGSCADWEPTVDWLARQGYRALAVDALGFG CCCCEEEECCEEEEEEECCCCCEEEEEECCCCCCCCCCHHHHHHHHCCCCEEEEEECCCC RSEKPVNAPYGLHLQSDLYAGLLTALGIERAVFVAHSMGGKYALATALRHPQRIARLVLI CCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHEEEECCCCCCHHHHHHHHCHHHHEEEEEE ATDGFIKPSPLTIIGGWPVLGETILWLSAHPAVVRAFLAAAFHNPEPYLTADLIERGRAA EECCCCCCCCEEEECCCHHHCCEEEEEECCHHHHHHHHHHHHCCCCCCEEHHHHHCCCCE ISGTANRRALTALSRRYAATDLTLTGLRARLGELRVPTLLVWGEHDRVFSFDYARIANRE ECCCCCHHHHHHHHHHHHHCCEEEHHHHHHHCCCCCCEEEEECCCCCEEEEHHHHHHCCC IPGSQLVVIPHCGHFPHIEAVRPFRGLLNGFLAPVHSNPS CCCCEEEEEECCCCCCCHHHHHHHHHHHHHHEECCCCCCC >Mature Secondary Structure MRSRWLRINGYQLHWIEAGQGPAVILLHGFAGSCADWEPTVDWLARQGYRALAVDALGFG CCCCEEEECCEEEEEEECCCCCEEEEEECCCCCCCCCCHHHHHHHHCCCCEEEEEECCCC RSEKPVNAPYGLHLQSDLYAGLLTALGIERAVFVAHSMGGKYALATALRHPQRIARLVLI CCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHEEEECCCCCCHHHHHHHHCHHHHEEEEEE ATDGFIKPSPLTIIGGWPVLGETILWLSAHPAVVRAFLAAAFHNPEPYLTADLIERGRAA EECCCCCCCCEEEECCCHHHCCEEEEEECCHHHHHHHHHHHHCCCCCCEEHHHHHCCCCE ISGTANRRALTALSRRYAATDLTLTGLRARLGELRVPTLLVWGEHDRVFSFDYARIANRE ECCCCCHHHHHHHHHHHHHCCEEEHHHHHHHCCCCCCEEEEECCCCCEEEEHHHHHHCCC IPGSQLVVIPHCGHFPHIEAVRPFRGLLNGFLAPVHSNPS CCCCEEEEEECCCCCCCHHHHHHHHHHHHHHEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: 2-hydroxy-6-ketononadienedicarboxylate; H2O [C]
Specific reaction: 2-hydroxy-6-ketononadienedicarboxylate + H2O = 2-oxopent-4-enoate + succinate [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA