| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is 222524129
Identifier: 222524129
GI number: 222524129
Start: 1063550
End: 1065004
Strand: Direct
Name: 222524129
Synonym: Chy400_0845
Alternate gene names: NA
Gene position: 1063550-1065004 (Clockwise)
Preceding gene: 222524127
Following gene: 222524130
Centisome position: 20.19
GC content: 63.99
Gene sequence:
>1455_bases GTGAAAAACGTCTGGTATTTTGGGTGGTTAATCATATTCCTCCTCACGTCCTGCATCTCTGCCCCATCCCAGCCCACACC ACCCCCCACGGCCACGCCATCGGGAGAGGTTGCAACCGCTACCCCAATTGTGCAACCGATCACCACACCAACCGCATCAC CGACGGCGCCACCCACTGTTATCGCCGCCGCCACCATCCCGGCCCCGGTCTACCTGATCGAAAACGATCAGGTGATGCGC CTGGAGCCGGATGGTCAGCGTTTGACCCAAATCACCTACGAGCCACAACCGGTACGCGACATGAGCGTTGCCGCCAACGG CACCCTGGTCTACCTGACCGGCAACGACCTGGTCGCCCTCGACGGCAACGGACGACGGGTGATCTTCAGCGAACAGGCAA TCACCAACCCCCGCATCTCCCCCGACGGTCAGCGGATTGTGTACCATCTCGCCAACCCTGCGCCTGGGCTAATCAACGGA CGCGCCGACTCACCGGCTGGCGTCTACCTCAGCCAGATCACCGGCGGACGACCGGAGCTGGTCATCGCCGACGACCCCGT CCCAGAAACGCCGGACATGGAAAATCCGGCCTGGCGCTACATCCCGGTCGCGTGGTCGCCAACCGGTGACCGGCTGCTAC TCTACGCAGTGATGCAACCGGAAATCGGCATTCCCGGCGGCGAAGCGGTCATTATCGGGCCGGACGGCCAGATCGTGCGT GCCTTCAGTTGCTGCGAAGAGGAGCTGTGGAGCGTTGACGGTCGTGACCTGGCGGTGGCGGGTGGCGGCCCCGGCCCCGA CATCCGCTTCGGCCTCTACCTGATCAACGCCGACGACGGCAGCGAAACCGCCCTCCTCTCCGCCGACGAAACCACCATTC CGCTGGTGCGTGCCCCGCAACGCCTGGCCGACGGCTTCGTCTACGCCTTCGTCGAAATGGTACCGACCACTGTCTACTCG TGGGAATACCCTTTCCGCCCGTTCATGTCGCGCATAAGCGATAACGGCCAGATCACACCACTACGCCCGGAACCGCTCAC CGAACCGATAGCCGTCCTCTGGGATGCGCAGGCCCGTGGTGCCTTAATCCGCTTCGCCACCACCGATCCGCTCATCTGGC TACCCACCGATCCGACCCTACCACCGCAACCTACCATTGCCACCGGCTTTGCCTTCACCTGGGTACCGGATGCCGACCCG GTAGCCCGCGACTGCGCATCATTCAGCCCGTTAAGCCCCCAAACCGACGCAGCACGTCGCTACGATCCGGCGGTGGCCGA CATCCAGGCCCGACTGGCAATACTCGGCTTCGATCCCGGCCCGGCAGATGGTCTCTTCGGCCCAACCACAGCCCGCGCCG TCCACACCTTTCGCGCCGCAGCCGGACTACCCGAAGGCGAGACCATTGACTGCGCAGCGTGGCAAGAACTCTTCAGACGG AGCACGACGCCATGA
Upstream 100 bases:
>100_bases TACGCGAAGTCGGCAATTATGACCACTACTGCCGGGCCACCTCGACCGATGCACACCCGGCCACACCAGGATGTTCTCGC CTACCAACAGGAGCCGTCTT
Downstream 100 bases:
>100_bases TCCCACCCGACATTGCCGAACAGATCAGCGCCATTCACGCCGCACCAACCCGCCTGGTCCTCGTCTTTGCCGGAGCCGGC AGCCTGGGGTTAGCCTGGCT
Product: peptidoglycan-binding domain 1 protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 484; Mature: 484
Protein sequence:
>484_residues MKNVWYFGWLIIFLLTSCISAPSQPTPPPTATPSGEVATATPIVQPITTPTASPTAPPTVIAAATIPAPVYLIENDQVMR LEPDGQRLTQITYEPQPVRDMSVAANGTLVYLTGNDLVALDGNGRRVIFSEQAITNPRISPDGQRIVYHLANPAPGLING RADSPAGVYLSQITGGRPELVIADDPVPETPDMENPAWRYIPVAWSPTGDRLLLYAVMQPEIGIPGGEAVIIGPDGQIVR AFSCCEEELWSVDGRDLAVAGGGPGPDIRFGLYLINADDGSETALLSADETTIPLVRAPQRLADGFVYAFVEMVPTTVYS WEYPFRPFMSRISDNGQITPLRPEPLTEPIAVLWDAQARGALIRFATTDPLIWLPTDPTLPPQPTIATGFAFTWVPDADP VARDCASFSPLSPQTDAARRYDPAVADIQARLAILGFDPGPADGLFGPTTARAVHTFRAAAGLPEGETIDCAAWQELFRR STTP
Sequences:
>Translated_484_residues MKNVWYFGWLIIFLLTSCISAPSQPTPPPTATPSGEVATATPIVQPITTPTASPTAPPTVIAAATIPAPVYLIENDQVMR LEPDGQRLTQITYEPQPVRDMSVAANGTLVYLTGNDLVALDGNGRRVIFSEQAITNPRISPDGQRIVYHLANPAPGLING RADSPAGVYLSQITGGRPELVIADDPVPETPDMENPAWRYIPVAWSPTGDRLLLYAVMQPEIGIPGGEAVIIGPDGQIVR AFSCCEEELWSVDGRDLAVAGGGPGPDIRFGLYLINADDGSETALLSADETTIPLVRAPQRLADGFVYAFVEMVPTTVYS WEYPFRPFMSRISDNGQITPLRPEPLTEPIAVLWDAQARGALIRFATTDPLIWLPTDPTLPPQPTIATGFAFTWVPDADP VARDCASFSPLSPQTDAARRYDPAVADIQARLAILGFDPGPADGLFGPTTARAVHTFRAAAGLPEGETIDCAAWQELFRR STTP >Mature_484_residues MKNVWYFGWLIIFLLTSCISAPSQPTPPPTATPSGEVATATPIVQPITTPTASPTAPPTVIAAATIPAPVYLIENDQVMR LEPDGQRLTQITYEPQPVRDMSVAANGTLVYLTGNDLVALDGNGRRVIFSEQAITNPRISPDGQRIVYHLANPAPGLING RADSPAGVYLSQITGGRPELVIADDPVPETPDMENPAWRYIPVAWSPTGDRLLLYAVMQPEIGIPGGEAVIIGPDGQIVR AFSCCEEELWSVDGRDLAVAGGGPGPDIRFGLYLINADDGSETALLSADETTIPLVRAPQRLADGFVYAFVEMVPTTVYS WEYPFRPFMSRISDNGQITPLRPEPLTEPIAVLWDAQARGALIRFATTDPLIWLPTDPTLPPQPTIATGFAFTWVPDADP VARDCASFSPLSPQTDAARRYDPAVADIQARLAILGFDPGPADGLFGPTTARAVHTFRAAAGLPEGETIDCAAWQELFRR STTP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 52000; Mature: 52000
Theoretical pI: Translated: 4.15; Mature: 4.15
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNVWYFGWLIIFLLTSCISAPSQPTPPPTATPSGEVATATPIVQPITTPTASPTAPPTV CCCEEHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCEE IAAATIPAPVYLIENDQVMRLEPDGQRLTQITYEPQPVRDMSVAANGTLVYLTGNDLVAL EEEECCCCEEEEECCCCEEEECCCCCEEEEEEECCCCCCCEEEECCCEEEEEECCCEEEE DGNGRRVIFSEQAITNPRISPDGQRIVYHLANPAPGLINGRADSPAGVYLSQITGGRPEL CCCCCEEEEECCCCCCCCCCCCCCEEEEEECCCCCCCEECCCCCCCCEEEEECCCCCCEE VIADDPVPETPDMENPAWRYIPVAWSPTGDRLLLYAVMQPEIGIPGGEAVIIGPDGQIVR EECCCCCCCCCCCCCCCEEEEEEEECCCCCEEEEEEEECCCCCCCCCCEEEECCCCCEEH AFSCCEEELWSVDGRDLAVAGGGPGPDIRFGLYLINADDGSETALLSADETTIPLVRAPQ HHHHHHHHHHCCCCCEEEEECCCCCCCEEEEEEEEECCCCCCEEEEECCCCCCCCEECCH RLADGFVYAFVEMVPTTVYSWEYPFRPFMSRISDNGQITPLRPEPLTEPIAVLWDAQARG HHHHHHHHHHHHHHCCEEEECCCCHHHHHHHHCCCCCEEECCCCCCCCCEEEEECCCCCC ALIRFATTDPLIWLPTDPTLPPQPTIATGFAFTWVPDADPVARDCASFSPLSPQTDAARR EEEEEECCCCEEEECCCCCCCCCCCEECCEEEEECCCCCHHHHHHHCCCCCCCCCCHHHH YDPAVADIQARLAILGFDPGPADGLFGPTTARAVHTFRAAAGLPEGETIDCAAWQELFRR CCCHHHHCEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCEECHHHHHHHHHH STTP CCCC >Mature Secondary Structure MKNVWYFGWLIIFLLTSCISAPSQPTPPPTATPSGEVATATPIVQPITTPTASPTAPPTV CCCEEHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCEE IAAATIPAPVYLIENDQVMRLEPDGQRLTQITYEPQPVRDMSVAANGTLVYLTGNDLVAL EEEECCCCEEEEECCCCEEEECCCCCEEEEEEECCCCCCCEEEECCCEEEEEECCCEEEE DGNGRRVIFSEQAITNPRISPDGQRIVYHLANPAPGLINGRADSPAGVYLSQITGGRPEL CCCCCEEEEECCCCCCCCCCCCCCEEEEEECCCCCCCEECCCCCCCCEEEEECCCCCCEE VIADDPVPETPDMENPAWRYIPVAWSPTGDRLLLYAVMQPEIGIPGGEAVIIGPDGQIVR EECCCCCCCCCCCCCCCEEEEEEEECCCCCEEEEEEEECCCCCCCCCCEEEECCCCCEEH AFSCCEEELWSVDGRDLAVAGGGPGPDIRFGLYLINADDGSETALLSADETTIPLVRAPQ HHHHHHHHHHCCCCCEEEEECCCCCCCEEEEEEEEECCCCCCEEEEECCCCCCCCEECCH RLADGFVYAFVEMVPTTVYSWEYPFRPFMSRISDNGQITPLRPEPLTEPIAVLWDAQARG HHHHHHHHHHHHHHCCEEEECCCCHHHHHHHHCCCCCEEECCCCCCCCCEEEEECCCCCC ALIRFATTDPLIWLPTDPTLPPQPTIATGFAFTWVPDADPVARDCASFSPLSPQTDAARR EEEEEECCCCEEEECCCCCCCCCCCEECCEEEEECCCCCHHHHHHHCCCCCCCCCCHHHH YDPAVADIQARLAILGFDPGPADGLFGPTTARAVHTFRAAAGLPEGETIDCAAWQELFRR CCCHHHHCEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCEECHHHHHHHHHH STTP CCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA