Definition Macrococcus caseolyticus JCSC5402, complete genome.
Accession NC_011999
Length 2,102,324

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The map label for this gene is yjbG [H]

Identifier: 222151291

GI number: 222151291

Start: 1151276

End: 1153075

Strand: Direct

Name: yjbG [H]

Synonym: MCCL_1044

Alternate gene names: 222151291

Gene position: 1151276-1153075 (Clockwise)

Preceding gene: 222151289

Following gene: 222151292

Centisome position: 54.76

GC content: 37.06

Gene sequence:

>1800_bases
ATGGGATTACCATCAAGAAGTGAAGTTAATGCGTCAGAAACATGGGACTTATCTCCCCTGTTTAAAGATGATACTTCGTT
TTATCAAGCGTTAGAACAAGCAGTAGAAAATTCACGTGAATTCAACAAGAAATATAAAGGTAATTTAAACAACGCAGACA
TAATCCATGAAGCGTTAGATACATATGCAGAGCTTAATATCGCATTAGACACTTTAGGAAATTATGCAAACTTACAGTTC
AGTACAGATCAGACTAACCCTGATGCTGGAAAACTATACAGCAAATTTTCTTCAAGTTACGGTAAGATTGCAAGCGAGCT
TACATTTTTAAATTCGGAACTTATAGCAAAAGAAGAATCAGAGCTTATAACTTTGAAAGATACCCTGCCATATAGTCGTT
TCTTTGAAAAATTAATTAAAGCGAAACCATATGAATTACATCCAGAGGTTGAAAAGGCTCTAGCATCGTTCTCTCCAGTG
TTTAATGCGCCTTATAATTTATATGATACGACTAAGATGCAGGATATCGATTTCGGTACATTTGAAGCACACGGTAAGAC
GATACCGATGAGTTATGTTTCGTTCGAAGGTGAACTAGAAGTTGATAATGATACAGAAGTTAGACGCAACGCCTTTAAAG
CTTTCTCAGATACTTTGAGAAGGTACGAGCACACTACAGCAAAGACTTATGATACACAAGTGCAGCAGGAAAAGATTGAA
TCTGAATTAAGAGGATATGATTCAGTCATTGACTTCCTGTTACACGATCAGGAAGTGTCACGTGATCTATACAATCGCCA
AATTGATTTAATAACGAAAGAACTTGCTCCACATATGCGTCGTTATGCAAAACTGATACAAAAAGCAAATAAACTTGAAA
CGATGAAATTTGAAGATTTGAAGATTTCATTGGATGAGTCATCTGAACCAGATATTACAGTAGAAGAATCACGTGATTAC
ATTAAGAAAGCACTCTCTGTAATGGGCGAAGAATATATGCAGCTCGTGAACGATTCTTATGACAAACGCTATATTGATTT
TGTACAGAATAAAGGGAAATCTACTGGCGCTTTTTGTGCAAGTCCATATGCTACCAATCCATTTATCTTAATTTCTTGGA
CGTCTAAAATGACTGAAGTATTTGTGTTAGCACATGAATTAGGACATGCTGGTCATTTTAACTATGCGAATAATAACCAG
AATATATTTGATGCTAACTGCTCACTGTATTTTGTTGAAGCCCCAAGTACGATGAATGAGATGCTTATGGCAAATCACTT
ATTAAAAGAATCGGATGATCCTAGATTTAAACGCTGGGTAATTGCATCGATTATCTCTAGAACGTACTATCACAATTTTG
TGACACACTTGTTAGAAGCGGCATATCAACGTGAAGTCTATAATCGCGTAGATGCAGGTGAATCGCTTACTGCCCCACTT
CTTAATGAAATAAAGCGTAACGTCATTTCAGATTTCTGGGGAGATGCTGTAGAAATTACTGAAGGTGCGGAACTGACATG
GATGCGTCAACCCCACTATTATATGGGATTATATCCGTATACGTATTCTGCAGGACTAACGATTGCGACACTTATGTCTA
AACGAATATTAGAAGAAGGACAACCTGCTGTAGAAGCTTGGACTGAGGTATTAAAGGCTGGCGGCTCTAAAACTCCTGTA
GAGCTTGCCAAAATGGTCAACATCGATTTAACTACCGATGCCCCACTGAAAGAAACGATTGCTTATATCGGAAGTCTCGT
TGATGAACTTGAAAAACTAACAGAAGAAATTGAAAATTAA

Upstream 100 bases:

>100_bases
TGCTAGATATAACATAAAATTATAAATAAACGAACTTTCTAAATTATTAGAATAGTAGTACAATGGAGGTGTTGATTTAA
AAATGAAAGGAAGATGATTT

Downstream 100 bases:

>100_bases
TAAAGGACTGATATGTAATGTCTAAACAAAAAGTAGTTGTGATTACTGGTGATCAGAGTGGTATCGGTAAATGTGTTAAA
GAAAGTTTTGAAAAAAATGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 599; Mature: 598

Protein sequence:

>599_residues
MGLPSRSEVNASETWDLSPLFKDDTSFYQALEQAVENSREFNKKYKGNLNNADIIHEALDTYAELNIALDTLGNYANLQF
STDQTNPDAGKLYSKFSSSYGKIASELTFLNSELIAKEESELITLKDTLPYSRFFEKLIKAKPYELHPEVEKALASFSPV
FNAPYNLYDTTKMQDIDFGTFEAHGKTIPMSYVSFEGELEVDNDTEVRRNAFKAFSDTLRRYEHTTAKTYDTQVQQEKIE
SELRGYDSVIDFLLHDQEVSRDLYNRQIDLITKELAPHMRRYAKLIQKANKLETMKFEDLKISLDESSEPDITVEESRDY
IKKALSVMGEEYMQLVNDSYDKRYIDFVQNKGKSTGAFCASPYATNPFILISWTSKMTEVFVLAHELGHAGHFNYANNNQ
NIFDANCSLYFVEAPSTMNEMLMANHLLKESDDPRFKRWVIASIISRTYYHNFVTHLLEAAYQREVYNRVDAGESLTAPL
LNEIKRNVISDFWGDAVEITEGAELTWMRQPHYYMGLYPYTYSAGLTIATLMSKRILEEGQPAVEAWTEVLKAGGSKTPV
ELAKMVNIDLTTDAPLKETIAYIGSLVDELEKLTEEIEN

Sequences:

>Translated_599_residues
MGLPSRSEVNASETWDLSPLFKDDTSFYQALEQAVENSREFNKKYKGNLNNADIIHEALDTYAELNIALDTLGNYANLQF
STDQTNPDAGKLYSKFSSSYGKIASELTFLNSELIAKEESELITLKDTLPYSRFFEKLIKAKPYELHPEVEKALASFSPV
FNAPYNLYDTTKMQDIDFGTFEAHGKTIPMSYVSFEGELEVDNDTEVRRNAFKAFSDTLRRYEHTTAKTYDTQVQQEKIE
SELRGYDSVIDFLLHDQEVSRDLYNRQIDLITKELAPHMRRYAKLIQKANKLETMKFEDLKISLDESSEPDITVEESRDY
IKKALSVMGEEYMQLVNDSYDKRYIDFVQNKGKSTGAFCASPYATNPFILISWTSKMTEVFVLAHELGHAGHFNYANNNQ
NIFDANCSLYFVEAPSTMNEMLMANHLLKESDDPRFKRWVIASIISRTYYHNFVTHLLEAAYQREVYNRVDAGESLTAPL
LNEIKRNVISDFWGDAVEITEGAELTWMRQPHYYMGLYPYTYSAGLTIATLMSKRILEEGQPAVEAWTEVLKAGGSKTPV
ELAKMVNIDLTTDAPLKETIAYIGSLVDELEKLTEEIEN
>Mature_598_residues
GLPSRSEVNASETWDLSPLFKDDTSFYQALEQAVENSREFNKKYKGNLNNADIIHEALDTYAELNIALDTLGNYANLQFS
TDQTNPDAGKLYSKFSSSYGKIASELTFLNSELIAKEESELITLKDTLPYSRFFEKLIKAKPYELHPEVEKALASFSPVF
NAPYNLYDTTKMQDIDFGTFEAHGKTIPMSYVSFEGELEVDNDTEVRRNAFKAFSDTLRRYEHTTAKTYDTQVQQEKIES
ELRGYDSVIDFLLHDQEVSRDLYNRQIDLITKELAPHMRRYAKLIQKANKLETMKFEDLKISLDESSEPDITVEESRDYI
KKALSVMGEEYMQLVNDSYDKRYIDFVQNKGKSTGAFCASPYATNPFILISWTSKMTEVFVLAHELGHAGHFNYANNNQN
IFDANCSLYFVEAPSTMNEMLMANHLLKESDDPRFKRWVIASIISRTYYHNFVTHLLEAAYQREVYNRVDAGESLTAPLL
NEIKRNVISDFWGDAVEITEGAELTWMRQPHYYMGLYPYTYSAGLTIATLMSKRILEEGQPAVEAWTEVLKAGGSKTPVE
LAKMVNIDLTTDAPLKETIAYIGSLVDELEKLTEEIEN

Specific function: Unknown

COG id: COG1164

COG function: function code E; Oligoendopeptidase F

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M3B family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001567
- InterPro:   IPR004438
- InterPro:   IPR013647 [H]

Pfam domain/function: PF01432 Peptidase_M3; PF08439 Peptidase_M3_N [H]

EC number: NA

Molecular weight: Translated: 68547; Mature: 68415

Theoretical pI: Translated: 4.57; Mature: 4.57

Prosite motif: PS00142 ZINC_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGLPSRSEVNASETWDLSPLFKDDTSFYQALEQAVENSREFNKKYKGNLNNADIIHEALD
CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH
TYAELNIALDTLGNYANLQFSTDQTNPDAGKLYSKFSSSYGKIASELTFLNSELIAKEES
HHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
ELITLKDTLPYSRFFEKLIKAKPYELHPEVEKALASFSPVFNAPYNLYDTTKMQDIDFGT
CEEEEHHCCCHHHHHHHHHHCCCCCCCHHHHHHHHHCCHHHCCCCCCCCCCCCCCCCCCC
FEAHGKTIPMSYVSFEGELEVDNDTEVRRNAFKAFSDTLRRYEHTTAKTYDTQVQQEKIE
EECCCCEECCCEEECCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SELRGYDSVIDFLLHDQEVSRDLYNRQIDLITKELAPHMRRYAKLIQKANKLETMKFEDL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECE
KISLDESSEPDITVEESRDYIKKALSVMGEEYMQLVNDSYDKRYIDFVQNKGKSTGAFCA
EEEECCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCEEC
SPYATNPFILISWTSKMTEVFVLAHELGHAGHFNYANNNQNIFDANCSLYFVEAPSTMNE
CCCCCCCEEEEEECHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCEEEEEECCCHHHH
MLMANHLLKESDDPRFKRWVIASIISRTYYHNFVTHLLEAAYQREVYNRVDAGESLTAPL
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH
LNEIKRNVISDFWGDAVEITEGAELTWMRQPHYYMGLYPYTYSAGLTIATLMSKRILEEG
HHHHHHHHHHHHCCCCEEECCCCCEEEEECCCEEEEEECEECCCCHHHHHHHHHHHHHCC
QPAVEAWTEVLKAGGSKTPVELAKMVNIDLTTDAPLKETIAYIGSLVDELEKLTEEIEN
CHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
GLPSRSEVNASETWDLSPLFKDDTSFYQALEQAVENSREFNKKYKGNLNNADIIHEALD
CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH
TYAELNIALDTLGNYANLQFSTDQTNPDAGKLYSKFSSSYGKIASELTFLNSELIAKEES
HHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
ELITLKDTLPYSRFFEKLIKAKPYELHPEVEKALASFSPVFNAPYNLYDTTKMQDIDFGT
CEEEEHHCCCHHHHHHHHHHCCCCCCCHHHHHHHHHCCHHHCCCCCCCCCCCCCCCCCCC
FEAHGKTIPMSYVSFEGELEVDNDTEVRRNAFKAFSDTLRRYEHTTAKTYDTQVQQEKIE
EECCCCEECCCEEECCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SELRGYDSVIDFLLHDQEVSRDLYNRQIDLITKELAPHMRRYAKLIQKANKLETMKFEDL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECE
KISLDESSEPDITVEESRDYIKKALSVMGEEYMQLVNDSYDKRYIDFVQNKGKSTGAFCA
EEEECCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCEEC
SPYATNPFILISWTSKMTEVFVLAHELGHAGHFNYANNNQNIFDANCSLYFVEAPSTMNE
CCCCCCCEEEEEECHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCEEEEEECCCHHHH
MLMANHLLKESDDPRFKRWVIASIISRTYYHNFVTHLLEAAYQREVYNRVDAGESLTAPL
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH
LNEIKRNVISDFWGDAVEITEGAELTWMRQPHYYMGLYPYTYSAGLTIATLMSKRILEEG
HHHHHHHHHHHHCCCCEEECCCCCEEEEECCCEEEEEECEECCCCHHHHHHHHHHHHHCC
QPAVEAWTEVLKAGGSKTPVELAKMVNIDLTTDAPLKETIAYIGSLVDELEKLTEEIEN
CHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]