| Definition | Macrococcus caseolyticus JCSC5402, complete genome. |
|---|---|
| Accession | NC_011999 |
| Length | 2,102,324 |
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The map label for this gene is yjbG [H]
Identifier: 222151291
GI number: 222151291
Start: 1151276
End: 1153075
Strand: Direct
Name: yjbG [H]
Synonym: MCCL_1044
Alternate gene names: 222151291
Gene position: 1151276-1153075 (Clockwise)
Preceding gene: 222151289
Following gene: 222151292
Centisome position: 54.76
GC content: 37.06
Gene sequence:
>1800_bases ATGGGATTACCATCAAGAAGTGAAGTTAATGCGTCAGAAACATGGGACTTATCTCCCCTGTTTAAAGATGATACTTCGTT TTATCAAGCGTTAGAACAAGCAGTAGAAAATTCACGTGAATTCAACAAGAAATATAAAGGTAATTTAAACAACGCAGACA TAATCCATGAAGCGTTAGATACATATGCAGAGCTTAATATCGCATTAGACACTTTAGGAAATTATGCAAACTTACAGTTC AGTACAGATCAGACTAACCCTGATGCTGGAAAACTATACAGCAAATTTTCTTCAAGTTACGGTAAGATTGCAAGCGAGCT TACATTTTTAAATTCGGAACTTATAGCAAAAGAAGAATCAGAGCTTATAACTTTGAAAGATACCCTGCCATATAGTCGTT TCTTTGAAAAATTAATTAAAGCGAAACCATATGAATTACATCCAGAGGTTGAAAAGGCTCTAGCATCGTTCTCTCCAGTG TTTAATGCGCCTTATAATTTATATGATACGACTAAGATGCAGGATATCGATTTCGGTACATTTGAAGCACACGGTAAGAC GATACCGATGAGTTATGTTTCGTTCGAAGGTGAACTAGAAGTTGATAATGATACAGAAGTTAGACGCAACGCCTTTAAAG CTTTCTCAGATACTTTGAGAAGGTACGAGCACACTACAGCAAAGACTTATGATACACAAGTGCAGCAGGAAAAGATTGAA TCTGAATTAAGAGGATATGATTCAGTCATTGACTTCCTGTTACACGATCAGGAAGTGTCACGTGATCTATACAATCGCCA AATTGATTTAATAACGAAAGAACTTGCTCCACATATGCGTCGTTATGCAAAACTGATACAAAAAGCAAATAAACTTGAAA CGATGAAATTTGAAGATTTGAAGATTTCATTGGATGAGTCATCTGAACCAGATATTACAGTAGAAGAATCACGTGATTAC ATTAAGAAAGCACTCTCTGTAATGGGCGAAGAATATATGCAGCTCGTGAACGATTCTTATGACAAACGCTATATTGATTT TGTACAGAATAAAGGGAAATCTACTGGCGCTTTTTGTGCAAGTCCATATGCTACCAATCCATTTATCTTAATTTCTTGGA CGTCTAAAATGACTGAAGTATTTGTGTTAGCACATGAATTAGGACATGCTGGTCATTTTAACTATGCGAATAATAACCAG AATATATTTGATGCTAACTGCTCACTGTATTTTGTTGAAGCCCCAAGTACGATGAATGAGATGCTTATGGCAAATCACTT ATTAAAAGAATCGGATGATCCTAGATTTAAACGCTGGGTAATTGCATCGATTATCTCTAGAACGTACTATCACAATTTTG TGACACACTTGTTAGAAGCGGCATATCAACGTGAAGTCTATAATCGCGTAGATGCAGGTGAATCGCTTACTGCCCCACTT CTTAATGAAATAAAGCGTAACGTCATTTCAGATTTCTGGGGAGATGCTGTAGAAATTACTGAAGGTGCGGAACTGACATG GATGCGTCAACCCCACTATTATATGGGATTATATCCGTATACGTATTCTGCAGGACTAACGATTGCGACACTTATGTCTA AACGAATATTAGAAGAAGGACAACCTGCTGTAGAAGCTTGGACTGAGGTATTAAAGGCTGGCGGCTCTAAAACTCCTGTA GAGCTTGCCAAAATGGTCAACATCGATTTAACTACCGATGCCCCACTGAAAGAAACGATTGCTTATATCGGAAGTCTCGT TGATGAACTTGAAAAACTAACAGAAGAAATTGAAAATTAA
Upstream 100 bases:
>100_bases TGCTAGATATAACATAAAATTATAAATAAACGAACTTTCTAAATTATTAGAATAGTAGTACAATGGAGGTGTTGATTTAA AAATGAAAGGAAGATGATTT
Downstream 100 bases:
>100_bases TAAAGGACTGATATGTAATGTCTAAACAAAAAGTAGTTGTGATTACTGGTGATCAGAGTGGTATCGGTAAATGTGTTAAA GAAAGTTTTGAAAAAAATGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 599; Mature: 598
Protein sequence:
>599_residues MGLPSRSEVNASETWDLSPLFKDDTSFYQALEQAVENSREFNKKYKGNLNNADIIHEALDTYAELNIALDTLGNYANLQF STDQTNPDAGKLYSKFSSSYGKIASELTFLNSELIAKEESELITLKDTLPYSRFFEKLIKAKPYELHPEVEKALASFSPV FNAPYNLYDTTKMQDIDFGTFEAHGKTIPMSYVSFEGELEVDNDTEVRRNAFKAFSDTLRRYEHTTAKTYDTQVQQEKIE SELRGYDSVIDFLLHDQEVSRDLYNRQIDLITKELAPHMRRYAKLIQKANKLETMKFEDLKISLDESSEPDITVEESRDY IKKALSVMGEEYMQLVNDSYDKRYIDFVQNKGKSTGAFCASPYATNPFILISWTSKMTEVFVLAHELGHAGHFNYANNNQ NIFDANCSLYFVEAPSTMNEMLMANHLLKESDDPRFKRWVIASIISRTYYHNFVTHLLEAAYQREVYNRVDAGESLTAPL LNEIKRNVISDFWGDAVEITEGAELTWMRQPHYYMGLYPYTYSAGLTIATLMSKRILEEGQPAVEAWTEVLKAGGSKTPV ELAKMVNIDLTTDAPLKETIAYIGSLVDELEKLTEEIEN
Sequences:
>Translated_599_residues MGLPSRSEVNASETWDLSPLFKDDTSFYQALEQAVENSREFNKKYKGNLNNADIIHEALDTYAELNIALDTLGNYANLQF STDQTNPDAGKLYSKFSSSYGKIASELTFLNSELIAKEESELITLKDTLPYSRFFEKLIKAKPYELHPEVEKALASFSPV FNAPYNLYDTTKMQDIDFGTFEAHGKTIPMSYVSFEGELEVDNDTEVRRNAFKAFSDTLRRYEHTTAKTYDTQVQQEKIE SELRGYDSVIDFLLHDQEVSRDLYNRQIDLITKELAPHMRRYAKLIQKANKLETMKFEDLKISLDESSEPDITVEESRDY IKKALSVMGEEYMQLVNDSYDKRYIDFVQNKGKSTGAFCASPYATNPFILISWTSKMTEVFVLAHELGHAGHFNYANNNQ NIFDANCSLYFVEAPSTMNEMLMANHLLKESDDPRFKRWVIASIISRTYYHNFVTHLLEAAYQREVYNRVDAGESLTAPL LNEIKRNVISDFWGDAVEITEGAELTWMRQPHYYMGLYPYTYSAGLTIATLMSKRILEEGQPAVEAWTEVLKAGGSKTPV ELAKMVNIDLTTDAPLKETIAYIGSLVDELEKLTEEIEN >Mature_598_residues GLPSRSEVNASETWDLSPLFKDDTSFYQALEQAVENSREFNKKYKGNLNNADIIHEALDTYAELNIALDTLGNYANLQFS TDQTNPDAGKLYSKFSSSYGKIASELTFLNSELIAKEESELITLKDTLPYSRFFEKLIKAKPYELHPEVEKALASFSPVF NAPYNLYDTTKMQDIDFGTFEAHGKTIPMSYVSFEGELEVDNDTEVRRNAFKAFSDTLRRYEHTTAKTYDTQVQQEKIES ELRGYDSVIDFLLHDQEVSRDLYNRQIDLITKELAPHMRRYAKLIQKANKLETMKFEDLKISLDESSEPDITVEESRDYI KKALSVMGEEYMQLVNDSYDKRYIDFVQNKGKSTGAFCASPYATNPFILISWTSKMTEVFVLAHELGHAGHFNYANNNQN IFDANCSLYFVEAPSTMNEMLMANHLLKESDDPRFKRWVIASIISRTYYHNFVTHLLEAAYQREVYNRVDAGESLTAPLL NEIKRNVISDFWGDAVEITEGAELTWMRQPHYYMGLYPYTYSAGLTIATLMSKRILEEGQPAVEAWTEVLKAGGSKTPVE LAKMVNIDLTTDAPLKETIAYIGSLVDELEKLTEEIEN
Specific function: Unknown
COG id: COG1164
COG function: function code E; Oligoendopeptidase F
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M3B family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001567 - InterPro: IPR004438 - InterPro: IPR013647 [H]
Pfam domain/function: PF01432 Peptidase_M3; PF08439 Peptidase_M3_N [H]
EC number: NA
Molecular weight: Translated: 68547; Mature: 68415
Theoretical pI: Translated: 4.57; Mature: 4.57
Prosite motif: PS00142 ZINC_PROTEASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGLPSRSEVNASETWDLSPLFKDDTSFYQALEQAVENSREFNKKYKGNLNNADIIHEALD CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH TYAELNIALDTLGNYANLQFSTDQTNPDAGKLYSKFSSSYGKIASELTFLNSELIAKEES HHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC ELITLKDTLPYSRFFEKLIKAKPYELHPEVEKALASFSPVFNAPYNLYDTTKMQDIDFGT CEEEEHHCCCHHHHHHHHHHCCCCCCCHHHHHHHHHCCHHHCCCCCCCCCCCCCCCCCCC FEAHGKTIPMSYVSFEGELEVDNDTEVRRNAFKAFSDTLRRYEHTTAKTYDTQVQQEKIE EECCCCEECCCEEECCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SELRGYDSVIDFLLHDQEVSRDLYNRQIDLITKELAPHMRRYAKLIQKANKLETMKFEDL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECE KISLDESSEPDITVEESRDYIKKALSVMGEEYMQLVNDSYDKRYIDFVQNKGKSTGAFCA EEEECCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCEEC SPYATNPFILISWTSKMTEVFVLAHELGHAGHFNYANNNQNIFDANCSLYFVEAPSTMNE CCCCCCCEEEEEECHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCEEEEEECCCHHHH MLMANHLLKESDDPRFKRWVIASIISRTYYHNFVTHLLEAAYQREVYNRVDAGESLTAPL HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH LNEIKRNVISDFWGDAVEITEGAELTWMRQPHYYMGLYPYTYSAGLTIATLMSKRILEEG HHHHHHHHHHHHCCCCEEECCCCCEEEEECCCEEEEEECEECCCCHHHHHHHHHHHHHCC QPAVEAWTEVLKAGGSKTPVELAKMVNIDLTTDAPLKETIAYIGSLVDELEKLTEEIEN CHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure GLPSRSEVNASETWDLSPLFKDDTSFYQALEQAVENSREFNKKYKGNLNNADIIHEALD CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH TYAELNIALDTLGNYANLQFSTDQTNPDAGKLYSKFSSSYGKIASELTFLNSELIAKEES HHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC ELITLKDTLPYSRFFEKLIKAKPYELHPEVEKALASFSPVFNAPYNLYDTTKMQDIDFGT CEEEEHHCCCHHHHHHHHHHCCCCCCCHHHHHHHHHCCHHHCCCCCCCCCCCCCCCCCCC FEAHGKTIPMSYVSFEGELEVDNDTEVRRNAFKAFSDTLRRYEHTTAKTYDTQVQQEKIE EECCCCEECCCEEECCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SELRGYDSVIDFLLHDQEVSRDLYNRQIDLITKELAPHMRRYAKLIQKANKLETMKFEDL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECE KISLDESSEPDITVEESRDYIKKALSVMGEEYMQLVNDSYDKRYIDFVQNKGKSTGAFCA EEEECCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCEEC SPYATNPFILISWTSKMTEVFVLAHELGHAGHFNYANNNQNIFDANCSLYFVEAPSTMNE CCCCCCCEEEEEECHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCEEEEEECCCHHHH MLMANHLLKESDDPRFKRWVIASIISRTYYHNFVTHLLEAAYQREVYNRVDAGESLTAPL HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH LNEIKRNVISDFWGDAVEITEGAELTWMRQPHYYMGLYPYTYSAGLTIATLMSKRILEEG HHHHHHHHHHHHCCCCEEECCCCCEEEEECCCEEEEEECEECCCCHHHHHHHHHHHHHCC QPAVEAWTEVLKAGGSKTPVELAKMVNIDLTTDAPLKETIAYIGSLVDELEKLTEEIEN CHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]