| Definition | Macrococcus caseolyticus JCSC5402, complete genome. |
|---|---|
| Accession | NC_011999 |
| Length | 2,102,324 |
Click here to switch to the map view.
The map label for this gene is femB [H]
Identifier: 222151289
GI number: 222151289
Start: 1149366
End: 1150640
Strand: Direct
Name: femB [H]
Synonym: MCCL_1042
Alternate gene names: 222151289
Gene position: 1149366-1150640 (Clockwise)
Preceding gene: 222151288
Following gene: 222151291
Centisome position: 54.67
GC content: 37.88
Gene sequence:
>1275_bases ATGAAGTTTACAGAATTAACCGTTGAGGAATATGACCAGTATATGTGGAAAACTGAGGCGATGAGTCATTATTTTCAAAT GAAGGAGAATATAGAGAATCGTGAACGAAAAGGCTATCCCGTTGTATTGCTTGGTGTAAAAGAAGGAGAACGCGTCATCG CTGCAAGCCTCTTCTCGAAAATTCCGATCTTTGGAGGTTATCAGTACTATTCGAATCGAGGTCCTGTGATGGACTTCCAT GATTCGAAACTGGTTGACTTCTTCTTCAGAGGTCTTGACCATTATTTGAGACGTCATCAGGCAGTGTTCGTAAAGATTGA TCCTTATTGGATCTACAAATGCTATGACAAGGATGTTAATGCAAAGGACGATGCTGCAAACGATGAGATTATTCATCAGC TCAAACAGCTTGGCTATCAGCACAAAGGATTCAAAAGAGGATACTCACCAGATGAGCAAGTACGCTGGATGAGTGTCATG TATTTACATGGAGAAACACCGCAATCTCTGATGAAACAGTTTGATTCCCAAAGAAAGCGCAATATCAAGAAAGCACAAAA ATATGGTGTAAAAGTACGAATGCTGCATAAGGATGAACTGAATCTATTTCTTGATCTCTATCGAGAAACTGAAGAGAGAA CCGGATTTATATCAAGACCGGATGACTATATGCAAGGATTCAATGATACATATGGAGAAAATATACTACTACCATTAGCG TATATAGACTTAGATGAATATATGCAGCAACTTTCCGAAGAACTTACACAAGCAGAAATTTCACGAGATCAGATGATGGC AAATGAAAATAAAAGCGAAAAACAACTGACGAAAATTGCGCAGAAAGATCGTGATATTGATCACATAAAACAAGAGCTGC TTGAAATAAGCGAATTGCGAAAAACAGATGGACAAATACTAAATCTAGCAGCGGGCATGTTCTTCCAGAATCATTATGAG GTGAATTATTACTCAGGTGGTTCCAGCACAAAATATAACAAGTTCATGGGTCCATATGCAATGCATTGGTATATGATTAA TTATTGTCTGGACCATGGCTATGACCGTTATAATTTCTATGGTGTGTCCGGAGATTTCACTGAAGACAGCGAAGATTATG GTGTATATCGTTTCAAACGTGGATTTAACGCACAGATTGAAGAACTCGTCGGTGACTTTATAAAACCAATCAATAAAACT AGATACAATGCATATCAGCTATTAACAAGTGCGCGTACTAAAGCTGCACAAATAAAACAACGTATAAAAAAGTAA
Upstream 100 bases:
>100_bases TGTCATTGAGTATATCGGTGATTTTGAACTCCCTGTCAATAAAAGTGTCTATAATATATACAAACGAATCAAGAAATAAG TATTACTGGAGGCAGTATCT
Downstream 100 bases:
>100_bases TCACTTTAAGTGATTACTTTTTTATATATTTTAGTTTACATAATATATATTATCGGAAGTTATAGATTAGAGACAAACCA GAACCTACTCGTTCTGGTTT
Product: methicillin resistance protein FemB
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 424; Mature: 424
Protein sequence:
>424_residues MKFTELTVEEYDQYMWKTEAMSHYFQMKENIENRERKGYPVVLLGVKEGERVIAASLFSKIPIFGGYQYYSNRGPVMDFH DSKLVDFFFRGLDHYLRRHQAVFVKIDPYWIYKCYDKDVNAKDDAANDEIIHQLKQLGYQHKGFKRGYSPDEQVRWMSVM YLHGETPQSLMKQFDSQRKRNIKKAQKYGVKVRMLHKDELNLFLDLYRETEERTGFISRPDDYMQGFNDTYGENILLPLA YIDLDEYMQQLSEELTQAEISRDQMMANENKSEKQLTKIAQKDRDIDHIKQELLEISELRKTDGQILNLAAGMFFQNHYE VNYYSGGSSTKYNKFMGPYAMHWYMINYCLDHGYDRYNFYGVSGDFTEDSEDYGVYRFKRGFNAQIEELVGDFIKPINKT RYNAYQLLTSARTKAAQIKQRIKK
Sequences:
>Translated_424_residues MKFTELTVEEYDQYMWKTEAMSHYFQMKENIENRERKGYPVVLLGVKEGERVIAASLFSKIPIFGGYQYYSNRGPVMDFH DSKLVDFFFRGLDHYLRRHQAVFVKIDPYWIYKCYDKDVNAKDDAANDEIIHQLKQLGYQHKGFKRGYSPDEQVRWMSVM YLHGETPQSLMKQFDSQRKRNIKKAQKYGVKVRMLHKDELNLFLDLYRETEERTGFISRPDDYMQGFNDTYGENILLPLA YIDLDEYMQQLSEELTQAEISRDQMMANENKSEKQLTKIAQKDRDIDHIKQELLEISELRKTDGQILNLAAGMFFQNHYE VNYYSGGSSTKYNKFMGPYAMHWYMINYCLDHGYDRYNFYGVSGDFTEDSEDYGVYRFKRGFNAQIEELVGDFIKPINKT RYNAYQLLTSARTKAAQIKQRIKK >Mature_424_residues MKFTELTVEEYDQYMWKTEAMSHYFQMKENIENRERKGYPVVLLGVKEGERVIAASLFSKIPIFGGYQYYSNRGPVMDFH DSKLVDFFFRGLDHYLRRHQAVFVKIDPYWIYKCYDKDVNAKDDAANDEIIHQLKQLGYQHKGFKRGYSPDEQVRWMSVM YLHGETPQSLMKQFDSQRKRNIKKAQKYGVKVRMLHKDELNLFLDLYRETEERTGFISRPDDYMQGFNDTYGENILLPLA YIDLDEYMQQLSEELTQAEISRDQMMANENKSEKQLTKIAQKDRDIDHIKQELLEISELRKTDGQILNLAAGMFFQNHYE VNYYSGGSSTKYNKFMGPYAMHWYMINYCLDHGYDRYNFYGVSGDFTEDSEDYGVYRFKRGFNAQIEELVGDFIKPINKT RYNAYQLLTSARTKAAQIKQRIKK
Specific function: Catalyzes the incorporation of amino acid(s) into the interchain peptide bridge of peptidoglycan, using aminoacyl-tRNA as amino acid donor [H]
COG id: COG2348
COG function: function code V; Uncharacterized protein involved in methicillin resistance
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the femABX family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016181 - InterPro: IPR003447 [H]
Pfam domain/function: PF02388 FemAB [H]
EC number: NA
Molecular weight: Translated: 50434; Mature: 50434
Theoretical pI: Translated: 7.17; Mature: 7.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKFTELTVEEYDQYMWKTEAMSHYFQMKENIENRERKGYPVVLLGVKEGERVIAASLFSK CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHH IPIFGGYQYYSNRGPVMDFHDSKLVDFFFRGLDHYLRRHQAVFVKIDPYWIYKCYDKDVN CCCCCCCHHCCCCCCEECCCCHHHHHHHHHHHHHHHHHCCEEEEEECCEEEEEEECCCCC AKDDAANDEIIHQLKQLGYQHKGFKRGYSPDEQVRWMSVMYLHGETPQSLMKQFDSQRKR CCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCHHHEEEEEEEEECCCHHHHHHHHHHHHHH NIKKAQKYGVKVRMLHKDELNLFLDLYRETEERTGFISRPDDYMQGFNDTYGENILLPLA HHHHHHHCCCEEEEEEHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCCCCCEEEEEH YIDLDEYMQQLSEELTQAEISRDQMMANENKSEKQLTKIAQKDRDIDHIKQELLEISELR CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHH KTDGQILNLAAGMFFQNHYEVNYYSGGSSTKYNKFMGPYAMHWYMINYCLDHGYDRYNFY HCCCHHHHHHHHHHHHCCEEEEEECCCCCCCHHHHCCHHHHHHHHHHHHHHCCCCCCEEE GVSGDFTEDSEDYGVYRFKRGFNAQIEELVGDFIKPINKTRYNAYQLLTSARTKAAQIKQ ECCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RIKK HHCC >Mature Secondary Structure MKFTELTVEEYDQYMWKTEAMSHYFQMKENIENRERKGYPVVLLGVKEGERVIAASLFSK CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHH IPIFGGYQYYSNRGPVMDFHDSKLVDFFFRGLDHYLRRHQAVFVKIDPYWIYKCYDKDVN CCCCCCCHHCCCCCCEECCCCHHHHHHHHHHHHHHHHHCCEEEEEECCEEEEEEECCCCC AKDDAANDEIIHQLKQLGYQHKGFKRGYSPDEQVRWMSVMYLHGETPQSLMKQFDSQRKR CCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCHHHEEEEEEEEECCCHHHHHHHHHHHHHH NIKKAQKYGVKVRMLHKDELNLFLDLYRETEERTGFISRPDDYMQGFNDTYGENILLPLA HHHHHHHCCCEEEEEEHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCCCCCEEEEEH YIDLDEYMQQLSEELTQAEISRDQMMANENKSEKQLTKIAQKDRDIDHIKQELLEISELR CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHH KTDGQILNLAAGMFFQNHYEVNYYSGGSSTKYNKFMGPYAMHWYMINYCLDHGYDRYNFY HCCCHHHHHHHHHHHHCCEEEEEECCCCCCCHHHHCCHHHHHHHHHHHHHHCCCCCCEEE GVSGDFTEDSEDYGVYRFKRGFNAQIEELVGDFIKPINKTRYNAYQLLTSARTKAAQIKQ ECCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RIKK HHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8973364 [H]