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The map label for this gene is oppB [H]

Identifier: 222150855

GI number: 222150855

Start: 648721

End: 649650

Strand: Direct

Name: oppB [H]

Synonym: MCCL_0605

Alternate gene names: 222150855

Gene position: 648721-649650 (Clockwise)

Preceding gene: 222150854

Following gene: 222150856

Centisome position: 30.86

GC content: 34.41

Gene sequence:

>930_bases
TTGATGTTAAAGTATGCTTTGAAAAGATTAGTGTACATGATTATTACTTTATTCATCGTAGCAACGGCGACATTCTTTCT
GATGAAATTAATGCCAGGGTCTCCGTTTAACGATGAGAAATTATCTGCTGAGCAGAAACAGATTGTCAATGAAAAATATG
GGCTAAATGATCCGCTTCCAGTTCAATATGGAAATTATCTCAAAAATGTAGCAACAGGTGATTTTGGAAACAGTTTTCAA
TATGATGGAAAAACGGTGACTGAGCTGATAATGCCTCGTATTGGACCTTCAACTGAAATTGGTATTTACGCTATGATTAT
TGGTTTAATTCTAGGGATTTTATTAGGCGTAATTGCTGCAGTAAAACAAAATACCTGGACGGATTACTTAGCAACTATTT
TCTCAGTGTTTGCAATCTCAGTGCCTTCATTTGTACTTGCTGTATTATTACAATATTACTTATCAGTTAAAGTACAAATT
TTCCCAGTAGCAGGATGGGATGGAATTATGTATGCTGTCTTGCCGGCAATTGCATTGTCTGCTGGAGTTACAGCGACTAT
AGCACGATACATTCGTTCAGAAATGATTGAGGTATTAAGTTCGGATTACATAACTTTAGCAAAAGCAAAAGGAAATTCAA
CTAGTAAAGTATTATTTGGTCATGCATTAAGAAATGCATTAATACCAATTATTACATTAATTGGACCTATGACGGTTGGT
ATATTAACTGGAGCATTAACGATTGAAACAATCTTTGGTATACCTGGTCTAGGTGATCAGTTTGTACGTTCTATTCAAAT
GAATGATTACCCGGTAATTATGGCTTTAACAATTTTCTACAGCTTTTTATTCGTAGCAGTTCTGCTAGTGGTAGATATAT
TATATGGAATAATTGATCCAAGAATTCGCGTACAAGGAGGTAAAAATTAA

Upstream 100 bases:

>100_bases
AGTGAACGTTATATCGCATATTTTAGATTGCATCAAAACATATGTTTCAGTGTATATGTAACTTTTTAAAGAAGGATTTT
ATTTAAGAATAGGAGGATTT

Downstream 100 bases:

>100_bases
TGTCAAAGCAAGATACAAACTTTACTCATGCTGATCTAAATCAAAACTTACAGACATCTCCTGGATCATTTGTTCTAATA
GATCGTAAAGATGTAAACGA

Product: oligopeptide ABC transporter permease OppB

Products: ADP; phosphate; oligopeptides [Cytoplasm] [C]

Alternate protein names: Stage 0 sporulation protein KB [H]

Number of amino acids: Translated: 309; Mature: 309

Protein sequence:

>309_residues
MMLKYALKRLVYMIITLFIVATATFFLMKLMPGSPFNDEKLSAEQKQIVNEKYGLNDPLPVQYGNYLKNVATGDFGNSFQ
YDGKTVTELIMPRIGPSTEIGIYAMIIGLILGILLGVIAAVKQNTWTDYLATIFSVFAISVPSFVLAVLLQYYLSVKVQI
FPVAGWDGIMYAVLPAIALSAGVTATIARYIRSEMIEVLSSDYITLAKAKGNSTSKVLFGHALRNALIPIITLIGPMTVG
ILTGALTIETIFGIPGLGDQFVRSIQMNDYPVIMALTIFYSFLFVAVLLVVDILYGIIDPRIRVQGGKN

Sequences:

>Translated_309_residues
MMLKYALKRLVYMIITLFIVATATFFLMKLMPGSPFNDEKLSAEQKQIVNEKYGLNDPLPVQYGNYLKNVATGDFGNSFQ
YDGKTVTELIMPRIGPSTEIGIYAMIIGLILGILLGVIAAVKQNTWTDYLATIFSVFAISVPSFVLAVLLQYYLSVKVQI
FPVAGWDGIMYAVLPAIALSAGVTATIARYIRSEMIEVLSSDYITLAKAKGNSTSKVLFGHALRNALIPIITLIGPMTVG
ILTGALTIETIFGIPGLGDQFVRSIQMNDYPVIMALTIFYSFLFVAVLLVVDILYGIIDPRIRVQGGKN
>Mature_309_residues
MMLKYALKRLVYMIITLFIVATATFFLMKLMPGSPFNDEKLSAEQKQIVNEKYGLNDPLPVQYGNYLKNVATGDFGNSFQ
YDGKTVTELIMPRIGPSTEIGIYAMIIGLILGILLGVIAAVKQNTWTDYLATIFSVFAISVPSFVLAVLLQYYLSVKVQI
FPVAGWDGIMYAVLPAIALSAGVTATIARYIRSEMIEVLSSDYITLAKAKGNSTSKVLFGHALRNALIPIITLIGPMTVG
ILTGALTIETIFGIPGLGDQFVRSIQMNDYPVIMALTIFYSFLFVAVLLVVDILYGIIDPRIRVQGGKN

Specific function: Part of the binding-protein-dependent transport system for oligopeptides; probably responsible for the translocation of the substrate across the membrane. Also required for sporulation and competence [H]

COG id: COG0601

COG function: function code EP; ABC-type dipeptide/oligopeptide/nickel transport systems, permease components

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787497, Length=305, Percent_Identity=42.9508196721311, Blast_Score=248, Evalue=5e-67,
Organism=Escherichia coli, GI1787053, Length=305, Percent_Identity=38.6885245901639, Blast_Score=221, Evalue=7e-59,
Organism=Escherichia coli, GI1789965, Length=337, Percent_Identity=33.8278931750742, Blast_Score=181, Evalue=4e-47,
Organism=Escherichia coli, GI1789888, Length=315, Percent_Identity=31.1111111111111, Blast_Score=157, Evalue=1e-39,
Organism=Escherichia coli, GI1787761, Length=333, Percent_Identity=32.7327327327327, Blast_Score=137, Evalue=7e-34,
Organism=Escherichia coli, GI1788504, Length=364, Percent_Identity=23.9010989010989, Blast_Score=108, Evalue=5e-25,
Organism=Escherichia coli, GI1787550, Length=266, Percent_Identity=28.5714285714286, Blast_Score=105, Evalue=3e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 33863; Mature: 33863

Theoretical pI: Translated: 9.21; Mature: 9.21

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMLKYALKRLVYMIITLFIVATATFFLMKLMPGSPFNDEKLSAEQKQIVNEKYGLNDPLP
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCC
VQYGNYLKNVATGDFGNSFQYDGKTVTELIMPRIGPSTEIGIYAMIIGLILGILLGVIAA
CHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
VKQNTWTDYLATIFSVFAISVPSFVLAVLLQYYLSVKVQIFPVAGWDGIMYAVLPAIALS
HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEEECCCHHHHHHHHHHHHHH
AGVTATIARYIRSEMIEVLSSDYITLAKAKGNSTSKVLFGHALRNALIPIITLIGPMTVG
CCHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
ILTGALTIETIFGIPGLGDQFVRSIQMNDYPVIMALTIFYSFLFVAVLLVVDILYGIIDP
HHHHHHHHHHHHCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
RIRVQGGKN
CEEECCCCC
>Mature Secondary Structure
MMLKYALKRLVYMIITLFIVATATFFLMKLMPGSPFNDEKLSAEQKQIVNEKYGLNDPLP
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCC
VQYGNYLKNVATGDFGNSFQYDGKTVTELIMPRIGPSTEIGIYAMIIGLILGILLGVIAA
CHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
VKQNTWTDYLATIFSVFAISVPSFVLAVLLQYYLSVKVQIFPVAGWDGIMYAVLPAIALS
HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEEECCCHHHHHHHHHHHHHH
AGVTATIARYIRSEMIEVLSSDYITLAKAKGNSTSKVLFGHALRNALIPIITLIGPMTVG
CCHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
ILTGALTIETIFGIPGLGDQFVRSIQMNDYPVIMALTIFYSFLFVAVLLVVDILYGIIDP
HHHHHHHHHHHHCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
RIRVQGGKN
CEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; oligopeptides [Periplasm]; H2O [C]

Specific reaction: ATP + oligopeptides [Periplasm] + H2O = ADP + phosphate + oligopeptides [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1901616; 1899858; 9384377 [H]