Click here to switch to the map view.

The map label for this gene is oppC [H]

Identifier: 222150856

GI number: 222150856

Start: 649650

End: 650699

Strand: Direct

Name: oppC [H]

Synonym: MCCL_0606

Alternate gene names: 222150856

Gene position: 649650-650699 (Clockwise)

Preceding gene: 222150855

Following gene: 222150857

Centisome position: 30.9

GC content: 34.76

Gene sequence:

>1050_bases
ATGTCAAAGCAAGATACAAACTTTACTCATGCTGATCTAAATCAAAACTTACAGACATCTCCTGGATCATTTGTTCTAAT
AGATCGTAAAGATGTAAACGATGAAAAGATTGAACGTAAAGCAAAAACCTTCTGGCAGGATGCTTGGTTACAATTAAAAG
CTAATAAAGCAGCAATTGTAGGATTGATTGGACTCGTTTTATTAGTAATTATGGCATTTGTCGGTCCTATGATTTCTGGA
CATACTTACAGAGCTCAAAATATTGATCATGCAAATTTGCCTCCTAAAATTGAAGCATTAAAAAACGTTTCTTTTCTTCC
GTTTGATGGAAAGGATAAAGATAATTTTGATGTATATGCTAATAGAAATATTAAAGAATCCTATTGGTTTGGTACGGATA
AGTTAGGACGAGATTTATTTACTCGTGTATGGAAAGGGACTCAAGTTTCTATATCAGTAGGGGTAGTAGCAGCGTTCTTA
GATGTGTTATTTGGGATTACTTATGGTGCCATCTCCGGATTTTTTGGAGGGCGTGTCGATACCGTAATGCAGCGTATTAT
TGAAGTAATCGCTTCGGTTCCAAACTTGATTATCATGATTTTATTCGTAATTGTATTTGATGCTAGTATTGTTACTATCA
TCCTTGCAATGTGTTTGACAGGGTGGATTGGCATGAGCCGAATTGTCCGTGGACAATTTTTAAAGCTTAAAAATCAAGAG
TTCGTTATGGCATCAAGAACATTAGGTGCATCAAACTCAAGCTTAATTTTTAAACATATTTTACCTAATACATTGGGACC
AATTATCGTTACTGCAATGTTTTCAGTTCCAGGTGCGATATTCTTCGAAGCCTTTCTAAGCTTTATTGGTTTAGGAATTC
CGGCACCGGCTACATCACTAGGATCGCTTGTTAATGACGGACGTAAAATGTTATTAATTCATCCTTATCAGATGTTTATT
CCATCATTTGTATTAAGTTTCTTAATTTTATGTTTCTATTTATTTGGAGATGGTGTACGTGATGCGTTTGATCCAAAAAT
GCGTAAATAA

Upstream 100 bases:

>100_bases
CAATTTTCTACAGCTTTTTATTCGTAGCAGTTCTGCTAGTGGTAGATATATTATATGGAATAATTGATCCAAGAATTCGC
GTACAAGGAGGTAAAAATTA

Downstream 100 bases:

>100_bases
AGGAGGAAATAAGAGTGGCTGATAGAATTTTAGAGGTTAAAAATTTAAAAGTTTCCTTCGATATTAACGCGGGGGAAGTG
CAAGCTGTAAGAGGAGTAGA

Product: oligopeptide ABC transporter permease OppC

Products: ADP; phosphate; oligopeptides [Cytoplasm] [C]

Alternate protein names: Stage 0 sporulation protein KC [H]

Number of amino acids: Translated: 349; Mature: 348

Protein sequence:

>349_residues
MSKQDTNFTHADLNQNLQTSPGSFVLIDRKDVNDEKIERKAKTFWQDAWLQLKANKAAIVGLIGLVLLVIMAFVGPMISG
HTYRAQNIDHANLPPKIEALKNVSFLPFDGKDKDNFDVYANRNIKESYWFGTDKLGRDLFTRVWKGTQVSISVGVVAAFL
DVLFGITYGAISGFFGGRVDTVMQRIIEVIASVPNLIIMILFVIVFDASIVTIILAMCLTGWIGMSRIVRGQFLKLKNQE
FVMASRTLGASNSSLIFKHILPNTLGPIIVTAMFSVPGAIFFEAFLSFIGLGIPAPATSLGSLVNDGRKMLLIHPYQMFI
PSFVLSFLILCFYLFGDGVRDAFDPKMRK

Sequences:

>Translated_349_residues
MSKQDTNFTHADLNQNLQTSPGSFVLIDRKDVNDEKIERKAKTFWQDAWLQLKANKAAIVGLIGLVLLVIMAFVGPMISG
HTYRAQNIDHANLPPKIEALKNVSFLPFDGKDKDNFDVYANRNIKESYWFGTDKLGRDLFTRVWKGTQVSISVGVVAAFL
DVLFGITYGAISGFFGGRVDTVMQRIIEVIASVPNLIIMILFVIVFDASIVTIILAMCLTGWIGMSRIVRGQFLKLKNQE
FVMASRTLGASNSSLIFKHILPNTLGPIIVTAMFSVPGAIFFEAFLSFIGLGIPAPATSLGSLVNDGRKMLLIHPYQMFI
PSFVLSFLILCFYLFGDGVRDAFDPKMRK
>Mature_348_residues
SKQDTNFTHADLNQNLQTSPGSFVLIDRKDVNDEKIERKAKTFWQDAWLQLKANKAAIVGLIGLVLLVIMAFVGPMISGH
TYRAQNIDHANLPPKIEALKNVSFLPFDGKDKDNFDVYANRNIKESYWFGTDKLGRDLFTRVWKGTQVSISVGVVAAFLD
VLFGITYGAISGFFGGRVDTVMQRIIEVIASVPNLIIMILFVIVFDASIVTIILAMCLTGWIGMSRIVRGQFLKLKNQEF
VMASRTLGASNSSLIFKHILPNTLGPIIVTAMFSVPGAIFFEAFLSFIGLGIPAPATSLGSLVNDGRKMLLIHPYQMFIP
SFVLSFLILCFYLFGDGVRDAFDPKMRK

Specific function: Part of the binding-protein-dependent transport system for oligopeptides; probably responsible for the translocation of the substrate across the membrane. Also required for sporulation and competence [H]

COG id: COG1173

COG function: function code EP; ABC-type dipeptide/oligopeptide/nickel transport systems, permease components

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787498, Length=314, Percent_Identity=37.8980891719745, Blast_Score=197, Evalue=9e-52,
Organism=Escherichia coli, GI1787054, Length=309, Percent_Identity=29.7734627831715, Blast_Score=172, Evalue=4e-44,
Organism=Escherichia coli, GI1787760, Length=321, Percent_Identity=31.1526479750779, Blast_Score=160, Evalue=2e-40,
Organism=Escherichia coli, GI1789889, Length=243, Percent_Identity=31.2757201646091, Blast_Score=140, Evalue=1e-34,
Organism=Escherichia coli, GI1788505, Length=219, Percent_Identity=32.8767123287671, Blast_Score=130, Evalue=2e-31,
Organism=Escherichia coli, GI1789964, Length=223, Percent_Identity=32.2869955156951, Blast_Score=116, Evalue=2e-27,
Organism=Escherichia coli, GI1787549, Length=309, Percent_Identity=23.3009708737864, Blast_Score=100, Evalue=1e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 38761; Mature: 38630

Theoretical pI: Translated: 9.84; Mature: 9.84

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKQDTNFTHADLNQNLQTSPGSFVLIDRKDVNDEKIERKAKTFWQDAWLQLKANKAAIV
CCCCCCCCCHHHCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHEEECCHHHHH
GLIGLVLLVIMAFVGPMISGHTYRAQNIDHANLPPKIEALKNVSFLPFDGKDKDNFDVYA
HHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCEEEE
NRNIKESYWFGTDKLGRDLFTRVWKGTQVSISVGVVAAFLDVLFGITYGAISGFFGGRVD
CCCCCHHHCCCCHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH
TVMQRIIEVIASVPNLIIMILFVIVFDASIVTIILAMCLTGWIGMSRIVRGQFLKLKNQE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH
FVMASRTLGASNSSLIFKHILPNTLGPIIVTAMFSVPGAIFFEAFLSFIGLGIPAPATSL
HEEHHHHCCCCCCHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCHHHH
GSLVNDGRKMLLIHPYQMFIPSFVLSFLILCFYLFGDGVRDAFDPKMRK
HHHHHCCCEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCCCC
>Mature Secondary Structure 
SKQDTNFTHADLNQNLQTSPGSFVLIDRKDVNDEKIERKAKTFWQDAWLQLKANKAAIV
CCCCCCCCHHHCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHEEECCHHHHH
GLIGLVLLVIMAFVGPMISGHTYRAQNIDHANLPPKIEALKNVSFLPFDGKDKDNFDVYA
HHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCEEEE
NRNIKESYWFGTDKLGRDLFTRVWKGTQVSISVGVVAAFLDVLFGITYGAISGFFGGRVD
CCCCCHHHCCCCHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH
TVMQRIIEVIASVPNLIIMILFVIVFDASIVTIILAMCLTGWIGMSRIVRGQFLKLKNQE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH
FVMASRTLGASNSSLIFKHILPNTLGPIIVTAMFSVPGAIFFEAFLSFIGLGIPAPATSL
HEEHHHHCCCCCCHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCHHHH
GSLVNDGRKMLLIHPYQMFIPSFVLSFLILCFYLFGDGVRDAFDPKMRK
HHHHHCCCEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; oligopeptides [Periplasm]; H2O [C]

Specific reaction: ATP + oligopeptides [Periplasm] + H2O = ADP + phosphate + oligopeptides [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1901616; 1899858; 9384377 [H]