| Definition | Macrococcus caseolyticus JCSC5402, complete genome. |
|---|---|
| Accession | NC_011999 |
| Length | 2,102,324 |
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The map label for this gene is yugJ [H]
Identifier: 222150835
GI number: 222150835
Start: 620819
End: 621979
Strand: Direct
Name: yugJ [H]
Synonym: MCCL_0585
Alternate gene names: 222150835
Gene position: 620819-621979 (Clockwise)
Preceding gene: 222150834
Following gene: 222150838
Centisome position: 29.53
GC content: 38.16
Gene sequence:
>1161_bases ATGAATCAATTTACATTTTATAATCCAGTTAAACTGGTATTTGGAAAAGAAAGTCTAGAACAGCTGAACGATATGGTGAA AGCTTATAGTAACGGAAATAAAGTACTACTTACATATGGAGGAGGAAGCATTAAGAAGACAGGTCTTTATGACAAAGTAA TGGAAAAGCTATCAGACTTTGAAGTATTTGAACTGTCTGGAATTGAACCGAATCCACGTGTTGAAACGGTACGTAAAGGC GTAGAAATCGTTAAAGAGAATAATATCGATTTTATCGTAGCAGTCGGTGGTGGATCTGTTATCGATGGTACGAAATTGAT TGCAGCTGCAAGTAAATATGACGGTGATGCTTGGGATATCGTTACACGTAAAGCACAAGTACAAGATGCTGTACCTTTTG GAACGGTATTAACATTATCGGCAACTGGTTCTGAAATGAACTCAGGCAGTGTTATTACAAACTGGGAGACAAACGAGAAG TTAGGTTGGGGTTCACCTCTTGTATTCCCTAAGTTTAGTCTGTTAAATCCGGAAGTTCTATACACATTACCAGAGCATCA GACAGTGAATGGTATTATCGATAGTATGAGTCACCTATTAGAACAATACTTTAACGAAGCAGATAATACAGAAGTACAAG ACCAGATGATCAGTGGCGTACTGAAGACTGTGATGAAGACTGGGCCAATTGCAGTGAAAGAACCAGAAAATTACGAAGCA CGTGAGACATTGATGTTATCATCAACAGTTGCATTAAACGGCTTCTTACGATTAGGCTACGTTGGTGACTGGGCAACACA TAATCTAGAACATGCAGTAAGTGCTGTATACGATATTGCACACGGTGCAGGTCTTGCGATATTATTCCCTGAGTGGATGC GTTATGTAAGTAAGCAGTCTCCTGCACGATTTGTGAAGTTTGCTGAAGATGTGTTCAATGTAGAGGCATCTTTGTCAGAT GAAGAAAAGATTAATTATGCGATTGATGAAATTCAGAACTTCTGGACAAGTTTAGGAGCGAAACAGAAGTTATCTGATTA TGGAGTGAAAGCTGAAGATTTAGAAGCATTTGCAGATAAAACTTTAATCTATGGTCCATTCGGTAACTTCTATAAGTTAC AACGTGAAGACATACTAGCAATCTATAAAGCAGCATTATAA
Upstream 100 bases:
>100_bases CACGTTACCGTGGATGGGCTTAATCATTTTCAATTCTATATTTTTTATGACATAATATGCTTACTTGCATGTTATGTCAT TTTTATTTCAGGAGGAAGTA
Downstream 100 bases:
>100_bases TATTCAACAGTAGTAAAAAAGCAGCGGATTCCGCTGCTTTTTTACATGTATTGTTCTGCTTTTGCGATTTGATTCATCAC GCTTTTTGTACTTGTTCCAT
Product: NADH-dependent butanol dehydrogenase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 386; Mature: 386
Protein sequence:
>386_residues MNQFTFYNPVKLVFGKESLEQLNDMVKAYSNGNKVLLTYGGGSIKKTGLYDKVMEKLSDFEVFELSGIEPNPRVETVRKG VEIVKENNIDFIVAVGGGSVIDGTKLIAAASKYDGDAWDIVTRKAQVQDAVPFGTVLTLSATGSEMNSGSVITNWETNEK LGWGSPLVFPKFSLLNPEVLYTLPEHQTVNGIIDSMSHLLEQYFNEADNTEVQDQMISGVLKTVMKTGPIAVKEPENYEA RETLMLSSTVALNGFLRLGYVGDWATHNLEHAVSAVYDIAHGAGLAILFPEWMRYVSKQSPARFVKFAEDVFNVEASLSD EEKINYAIDEIQNFWTSLGAKQKLSDYGVKAEDLEAFADKTLIYGPFGNFYKLQREDILAIYKAAL
Sequences:
>Translated_386_residues MNQFTFYNPVKLVFGKESLEQLNDMVKAYSNGNKVLLTYGGGSIKKTGLYDKVMEKLSDFEVFELSGIEPNPRVETVRKG VEIVKENNIDFIVAVGGGSVIDGTKLIAAASKYDGDAWDIVTRKAQVQDAVPFGTVLTLSATGSEMNSGSVITNWETNEK LGWGSPLVFPKFSLLNPEVLYTLPEHQTVNGIIDSMSHLLEQYFNEADNTEVQDQMISGVLKTVMKTGPIAVKEPENYEA RETLMLSSTVALNGFLRLGYVGDWATHNLEHAVSAVYDIAHGAGLAILFPEWMRYVSKQSPARFVKFAEDVFNVEASLSD EEKINYAIDEIQNFWTSLGAKQKLSDYGVKAEDLEAFADKTLIYGPFGNFYKLQREDILAIYKAAL >Mature_386_residues MNQFTFYNPVKLVFGKESLEQLNDMVKAYSNGNKVLLTYGGGSIKKTGLYDKVMEKLSDFEVFELSGIEPNPRVETVRKG VEIVKENNIDFIVAVGGGSVIDGTKLIAAASKYDGDAWDIVTRKAQVQDAVPFGTVLTLSATGSEMNSGSVITNWETNEK LGWGSPLVFPKFSLLNPEVLYTLPEHQTVNGIIDSMSHLLEQYFNEADNTEVQDQMISGVLKTVMKTGPIAVKEPENYEA RETLMLSSTVALNGFLRLGYVGDWATHNLEHAVSAVYDIAHGAGLAILFPEWMRYVSKQSPARFVKFAEDVFNVEASLSD EEKINYAIDEIQNFWTSLGAKQKLSDYGVKAEDLEAFADKTLIYGPFGNFYKLQREDILAIYKAAL
Specific function: Unknown
COG id: COG1979
COG function: function code C; Uncharacterized oxidoreductases, Fe-dependent alcohol dehydrogenase family
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the iron-containing alcohol dehydrogenase family [H]
Homologues:
Organism=Escherichia coli, GI1789386, Length=390, Percent_Identity=40, Blast_Score=298, Evalue=3e-82, Organism=Escherichia coli, GI48994951, Length=394, Percent_Identity=28.6802030456853, Blast_Score=143, Evalue=2e-35, Organism=Escherichia coli, GI1789163, Length=386, Percent_Identity=25.3886010362694, Blast_Score=110, Evalue=2e-25, Organism=Escherichia coli, GI87082107, Length=315, Percent_Identity=24.4444444444444, Blast_Score=94, Evalue=2e-20, Organism=Escherichia coli, GI1787493, Length=383, Percent_Identity=22.976501305483, Blast_Score=79, Evalue=4e-16, Organism=Caenorhabditis elegans, GI17537053, Length=335, Percent_Identity=24.4776119402985, Blast_Score=72, Evalue=5e-13, Organism=Saccharomyces cerevisiae, GI6321181, Length=384, Percent_Identity=26.3020833333333, Blast_Score=126, Evalue=6e-30,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001670 - InterPro: IPR018211 [H]
Pfam domain/function: PF00465 Fe-ADH [H]
EC number: 1.1.-.- [C]
Molecular weight: Translated: 42814; Mature: 42814
Theoretical pI: Translated: 4.55; Mature: 4.55
Prosite motif: PS00060 ADH_IRON_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNQFTFYNPVKLVFGKESLEQLNDMVKAYSNGNKVLLTYGGGSIKKTGLYDKVMEKLSDF CCCCCEECCEEEEECHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCHHHHHHHHHCCC EVFELSGIEPNPRVETVRKGVEIVKENNIDFIVAVGGGSVIDGTKLIAAASKYDGDAWDI CEEEECCCCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCEECCHHHEEECCCCCCCHHHH VTRKAQVQDAVPFGTVLTLSATGSEMNSGSVITNWETNEKLGWGSPLVFPKFSLLNPEVL HHHHHHHHCCCCCCEEEEEEECCCCCCCCCEEECCCCCCCCCCCCCCCCCCHHCCCCEEE YTLPEHQTVNGIIDSMSHLLEQYFNEADNTEVQDQMISGVLKTVMKTGPIAVKEPENYEA EECCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCEEEECCCCCCH RETLMLSSTVALNGFLRLGYVGDWATHNLEHAVSAVYDIAHGAGLAILFPEWMRYVSKQS HHHHEEHHHHHHHCEEEEEEECCHHHCCHHHHHHHHHHHHCCCCEEEECHHHHHHHCCCC PARFVKFAEDVFNVEASLSDEEKINYAIDEIQNFWTSLGAKQKLSDYGVKAEDLEAFADK HHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCHHHHHHHHCC TLIYGPFGNFYKLQREDILAIYKAAL EEEECCCCCCCCCCHHHHHHHHHHCC >Mature Secondary Structure MNQFTFYNPVKLVFGKESLEQLNDMVKAYSNGNKVLLTYGGGSIKKTGLYDKVMEKLSDF CCCCCEECCEEEEECHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCHHHHHHHHHCCC EVFELSGIEPNPRVETVRKGVEIVKENNIDFIVAVGGGSVIDGTKLIAAASKYDGDAWDI CEEEECCCCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCEECCHHHEEECCCCCCCHHHH VTRKAQVQDAVPFGTVLTLSATGSEMNSGSVITNWETNEKLGWGSPLVFPKFSLLNPEVL HHHHHHHHCCCCCCEEEEEEECCCCCCCCCEEECCCCCCCCCCCCCCCCCCHHCCCCEEE YTLPEHQTVNGIIDSMSHLLEQYFNEADNTEVQDQMISGVLKTVMKTGPIAVKEPENYEA EECCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCEEEECCCCCCH RETLMLSSTVALNGFLRLGYVGDWATHNLEHAVSAVYDIAHGAGLAILFPEWMRYVSKQS HHHHEEHHHHHHHCEEEEEEECCHHHCCHHHHHHHHHHHHCCCCEEEECHHHHHHHCCCC PARFVKFAEDVFNVEASLSDEEKINYAIDEIQNFWTSLGAKQKLSDYGVKAEDLEAFADK HHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCHHHHHHHHCC TLIYGPFGNFYKLQREDILAIYKAAL EEEECCCCCCCCCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9274030; 9384377 [H]