| Definition | Macrococcus caseolyticus JCSC5402, complete genome. |
|---|---|
| Accession | NC_011999 |
| Length | 2,102,324 |
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The map label for this gene is pgm [H]
Identifier: 222150774
GI number: 222150774
Start: 556430
End: 557965
Strand: Direct
Name: pgm [H]
Synonym: MCCL_0524
Alternate gene names: 222150774
Gene position: 556430-557965 (Clockwise)
Preceding gene: 222150773
Following gene: 222150775
Centisome position: 26.47
GC content: 40.69
Gene sequence:
>1536_bases ATGAAAAGCCCGACAGCTTTAATCATTTTAGATGGTTTTGCAAACCGTAAAGAAACCTTTGGGAATGCAGTAGCGCAAGC TCATAAACCAAATTTTGACCGTTACTACAATCAATATCCACATAGCGAATTAAAAGCATGTGGATTGGATGTAGGACTGC CTGAAGGACAGATGGGTAATTCTGAAGTAGGTCATTTAAATATTGGAGCAGGCCGTGTTGTGTATCAGTCTTTAACACGT ATCAATAAATCGATTGAAGATGGTGATTTCTTTAAGAATCAAGTGCTGCTAGACGCAATGCAGCATGTAAAAGAGAAACA TACAGCCTTGCACTTAATGGGATTACTCTCTGATGGTGGCGTGCACAGTCACTATGAACATTTATTTGCGTTACTCAAAC TTGCGAAAGCGCAAGGGGTGGATAAGGTTTATGTCCATGCATTTTTAGATGGTCGCGATGTCGGTCAGCAGACAGCGCTT AAGTATATCGAAGCAACTGAAAAGCAGTTTAAAGAGATTGGTATCGGTCAATTTGCTTCTGTTTCTGGTCGTTATTATGC GATGGATAGAGACAAACGCTGGGATCGTGAGCAATTAGCATATGATGCCATGACATACGGTAAAGGTGTAGAATATAGTT CTGCTGCTGCAGGTGTAGAAGCAAGTTATGCAGAAGGTGTAAATGATGAGTTCGTTGTTCCTTTTGTGGTTAAAGACCAC GAAAAAGGAGAAGAGAACACAGGTGTAAACGATGGAGATGCGATGATTTTCTTCAACTTCAGACCTGACCGTGCAGCACA GCTTTCAGAAGTATATACGAATGAAGAATTTGATGGATTCAAGATGGATAAGCGTCTAATCGGAATCAAATTTGTTACAT TTACTAAGTACAACGATCAAGTGAAAGCGGATGTTGTATTCGAAAAGGTAGACTTAGTGAACACAATCGGTGAAGTTGCA GCAAACAATAATTTGACGCAACTGCGTATCGCTGAAACAGAAAAGTATCCGCACGTAACTTACTTTATGAGTGGTGGGCG TAATGATGAGTTTCCAGGTGAACGTCGTGTATTGATTGATTCACCGAAAGTTGCAACCTACGACTTACAGCCTGAAATGA GTGCATATGAAGTACGTGATGCATTACTTGCCGAACTCGATAAGGGTGATTTAGATTTAGTTATTTTAAACTTTGCAAAC CCTGATATGGTCGGACATTCTGGCATGCTGGAACCAACGATTAAAGCGATTGAGGCGGTGGATGAATGTCTAGGTGCAGT AGTGGATAAAATCCTGGAAATGCAAGGAACAGCGATTATTACAGCTGATCACGGTAATTCAGATGAAGTGTTAAAGCTTG ATGGAAGCCCAATGACGGCACATACAACAAATCCAGTTCCTGTTATTGTTACGCGTGAAGGCATTACGTTGCGTGAAGGT GGTCGTTTAGCTGATTTAGCACCAACGTTAGTAGATTTATTAGGTGTTGAAAAACCAGCTGATATGACTGGGGAAACATT AATACAAAAAGGTTAA
Upstream 100 bases:
>100_bases TCAAGGAATATATGGCAAACGAAAACATCGATGGTGCATTAGTAGGTGGCGCATCGTTAGAAGTGGATTCTTTTGTTCAA TTGTTAGAAGGTGCTAAGTA
Downstream 100 bases:
>100_bases TGTTATACAGAAAATGAATTACAAATAATTGATTATTTCAATTAAATCAATAATAATAAGTAAGAACACAAATTGAGAGG AGTTTTTATAAATGCCAATT
Product: phosphoglyceromutase
Products: NA
Alternate protein names: BPG-independent PGAM; Phosphoglyceromutase; iPGM [H]
Number of amino acids: Translated: 511; Mature: 511
Protein sequence:
>511_residues MKSPTALIILDGFANRKETFGNAVAQAHKPNFDRYYNQYPHSELKACGLDVGLPEGQMGNSEVGHLNIGAGRVVYQSLTR INKSIEDGDFFKNQVLLDAMQHVKEKHTALHLMGLLSDGGVHSHYEHLFALLKLAKAQGVDKVYVHAFLDGRDVGQQTAL KYIEATEKQFKEIGIGQFASVSGRYYAMDRDKRWDREQLAYDAMTYGKGVEYSSAAAGVEASYAEGVNDEFVVPFVVKDH EKGEENTGVNDGDAMIFFNFRPDRAAQLSEVYTNEEFDGFKMDKRLIGIKFVTFTKYNDQVKADVVFEKVDLVNTIGEVA ANNNLTQLRIAETEKYPHVTYFMSGGRNDEFPGERRVLIDSPKVATYDLQPEMSAYEVRDALLAELDKGDLDLVILNFAN PDMVGHSGMLEPTIKAIEAVDECLGAVVDKILEMQGTAIITADHGNSDEVLKLDGSPMTAHTTNPVPVIVTREGITLREG GRLADLAPTLVDLLGVEKPADMTGETLIQKG
Sequences:
>Translated_511_residues MKSPTALIILDGFANRKETFGNAVAQAHKPNFDRYYNQYPHSELKACGLDVGLPEGQMGNSEVGHLNIGAGRVVYQSLTR INKSIEDGDFFKNQVLLDAMQHVKEKHTALHLMGLLSDGGVHSHYEHLFALLKLAKAQGVDKVYVHAFLDGRDVGQQTAL KYIEATEKQFKEIGIGQFASVSGRYYAMDRDKRWDREQLAYDAMTYGKGVEYSSAAAGVEASYAEGVNDEFVVPFVVKDH EKGEENTGVNDGDAMIFFNFRPDRAAQLSEVYTNEEFDGFKMDKRLIGIKFVTFTKYNDQVKADVVFEKVDLVNTIGEVA ANNNLTQLRIAETEKYPHVTYFMSGGRNDEFPGERRVLIDSPKVATYDLQPEMSAYEVRDALLAELDKGDLDLVILNFAN PDMVGHSGMLEPTIKAIEAVDECLGAVVDKILEMQGTAIITADHGNSDEVLKLDGSPMTAHTTNPVPVIVTREGITLREG GRLADLAPTLVDLLGVEKPADMTGETLIQKG >Mature_511_residues MKSPTALIILDGFANRKETFGNAVAQAHKPNFDRYYNQYPHSELKACGLDVGLPEGQMGNSEVGHLNIGAGRVVYQSLTR INKSIEDGDFFKNQVLLDAMQHVKEKHTALHLMGLLSDGGVHSHYEHLFALLKLAKAQGVDKVYVHAFLDGRDVGQQTAL KYIEATEKQFKEIGIGQFASVSGRYYAMDRDKRWDREQLAYDAMTYGKGVEYSSAAAGVEASYAEGVNDEFVVPFVVKDH EKGEENTGVNDGDAMIFFNFRPDRAAQLSEVYTNEEFDGFKMDKRLIGIKFVTFTKYNDQVKADVVFEKVDLVNTIGEVA ANNNLTQLRIAETEKYPHVTYFMSGGRNDEFPGERRVLIDSPKVATYDLQPEMSAYEVRDALLAELDKGDLDLVILNFAN PDMVGHSGMLEPTIKAIEAVDECLGAVVDKILEMQGTAIITADHGNSDEVLKLDGSPMTAHTTNPVPVIVTREGITLREG GRLADLAPTLVDLLGVEKPADMTGETLIQKG
Specific function: Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate [H]
COG id: COG0696
COG function: function code G; Phosphoglyceromutase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the BPG-independent phosphoglycerate mutase family [H]
Homologues:
Organism=Escherichia coli, GI1790041, Length=509, Percent_Identity=47.5442043222004, Blast_Score=491, Evalue=1e-140, Organism=Caenorhabditis elegans, GI17507741, Length=515, Percent_Identity=40.9708737864078, Blast_Score=388, Evalue=1e-108, Organism=Caenorhabditis elegans, GI32564249, Length=514, Percent_Identity=41.0505836575875, Blast_Score=388, Evalue=1e-108,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017849 - InterPro: IPR017850 - InterPro: IPR011258 - InterPro: IPR006124 - InterPro: IPR005995 [H]
Pfam domain/function: PF06415 iPGM_N; PF01676 Metalloenzyme [H]
EC number: =5.4.2.1 [H]
Molecular weight: Translated: 56427; Mature: 56427
Theoretical pI: Translated: 4.75; Mature: 4.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKSPTALIILDGFANRKETFGNAVAQAHKPNFDRYYNQYPHSELKACGLDVGLPEGQMGN CCCCCEEEEECCCCCCHHHHHHHHHHHCCCCHHHHHHCCCCHHHHHCCCCCCCCCCCCCC SEVGHLNIGAGRVVYQSLTRINKSIEDGDFFKNQVLLDAMQHVKEKHTALHLMGLLSDGG CCCCEEECCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC VHSHYEHLFALLKLAKAQGVDKVYVHAFLDGRDVGQQTALKYIEATEKQFKEIGIGQFAS CHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCEEC VSGRYYAMDRDKRWDREQLAYDAMTYGKGVEYSSAAAGVEASYAEGVNDEFVVPFVVKDH CCCEEEEECCCCCCCHHHHHHHHHHHCCCCCCCHHHCCCCHHHHCCCCCCEEEEEEEECC EKGEENTGVNDGDAMIFFNFRPDRAAQLSEVYTNEEFDGFKMDKRLIGIKFVTFTKYNDQ CCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHCCCCCCCEECCCEEEEEEEEEEECCCCC VKADVVFEKVDLVNTIGEVAANNNLTQLRIAETEKYPHVTYFMSGGRNDEFPGERRVLID EEHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCEEEEEECCCCCCCCCCCCEEEEE SPKVATYDLQPEMSAYEVRDALLAELDKGDLDLVILNFANPDMVGHSGMLEPTIKAIEAV CCCEEEEECCCCCHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHH DECLGAVVDKILEMQGTAIITADHGNSDEVLKLDGSPMTAHTTNPVPVIVTREGITLREG HHHHHHHHHHHHHHCCCEEEEECCCCCCCEEEECCCCCEEECCCCEEEEEECCCEEEECC GRLADLAPTLVDLLGVEKPADMTGETLIQKG CCCHHHHHHHHHHHCCCCCCCCCCHHHHCCC >Mature Secondary Structure MKSPTALIILDGFANRKETFGNAVAQAHKPNFDRYYNQYPHSELKACGLDVGLPEGQMGN CCCCCEEEEECCCCCCHHHHHHHHHHHCCCCHHHHHHCCCCHHHHHCCCCCCCCCCCCCC SEVGHLNIGAGRVVYQSLTRINKSIEDGDFFKNQVLLDAMQHVKEKHTALHLMGLLSDGG CCCCEEECCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC VHSHYEHLFALLKLAKAQGVDKVYVHAFLDGRDVGQQTALKYIEATEKQFKEIGIGQFAS CHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCEEC VSGRYYAMDRDKRWDREQLAYDAMTYGKGVEYSSAAAGVEASYAEGVNDEFVVPFVVKDH CCCEEEEECCCCCCCHHHHHHHHHHHCCCCCCCHHHCCCCHHHHCCCCCCEEEEEEEECC EKGEENTGVNDGDAMIFFNFRPDRAAQLSEVYTNEEFDGFKMDKRLIGIKFVTFTKYNDQ CCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHCCCCCCCEECCCEEEEEEEEEEECCCCC VKADVVFEKVDLVNTIGEVAANNNLTQLRIAETEKYPHVTYFMSGGRNDEFPGERRVLID EEHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCEEEEEECCCCCCCCCCCCEEEEE SPKVATYDLQPEMSAYEVRDALLAELDKGDLDLVILNFANPDMVGHSGMLEPTIKAIEAV CCCEEEEECCCCCHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHH DECLGAVVDKILEMQGTAIITADHGNSDEVLKLDGSPMTAHTTNPVPVIVTREGITLREG HHHHHHHHHHHHHHCCCEEEEECCCCCCCEEEECCCCCEEECCCCEEEEEECCCEEEECC GRLADLAPTLVDLLGVEKPADMTGETLIQKG CCCHHHHHHHHHHHCCCCCCCCCCHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA