| Definition | Macrococcus caseolyticus JCSC5402, complete genome. |
|---|---|
| Accession | NC_011999 |
| Length | 2,102,324 |
Click here to switch to the map view.
The map label for this gene is pgk
Identifier: 222150772
GI number: 222150772
Start: 554478
End: 555668
Strand: Direct
Name: pgk
Synonym: MCCL_0522
Alternate gene names: 222150772
Gene position: 554478-555668 (Clockwise)
Preceding gene: 222150771
Following gene: 222150773
Centisome position: 26.37
GC content: 39.13
Gene sequence:
>1191_bases ATGGTTAAAAAGGTTGTTTCAGATTTAGAGTTAAAAGATAAAAAAGTACTCGTGCGTGCAGATTTCAATGTACCGATGAA AGATGGGAACATTACGAACGATAATCGTATCGTTGAAGCATTACCTACTATTAAATATATTATCGAGCAAGGCGGGAAAG TGATATTATTCTCTCACCTTGGTAAAGTGAAAACTGAAGAAGATAAAGCGAATTTATCACTTCAACCTGTAGCAAACCGT TTATCAGAATTACTGGATAAAGAGGTTCAGTTTGTAGCTGAAACACGCGGAGAAAAGTTAGAGTCAGCAATTAACGCATT ACAACCAGGTGACGTATTATTATTCGAAAACACACGTTTCGAAGATGTTGATGGTAAGAAAGAAAGTAAGAATGATGCTG AACTTGGGAAGTACTGGGCATCACTTGGCGATGTATTTGTTAATGACGCTTTCGGTACAGCTCACCGTGAGCATGCATCG AATGTCGGTGTTGCGACGCATCTAGATACTGCTGCAGGATTCTTGATGGAAAAAGAAATTAAGTTTATCGGTGGGGTCGT TGAAAATCCAGAACGTCCTTTCGTTGCAATTTTAGGTGGTGCGAAAGTATCAGATAAAATCGGTGTTATCGAGAACTTAT TAGAAGTGGCTGATAAAGTATTGATCGGTGGCGGCATGGCGTACACATTCTTGAAAGCACAAGGTAAAGAAATCGGTCAT TCATTATTAGAGGAAGATAAAATTGACTTAGCGAAAGATTTAATGGAACGCGGTAAAGATAAACTTGTTCTACCTATTGA TGCGAAAGTGACAAAAGAGTTCTCAAATGATGGAGAAATCGAAGCAGTAGCAATCGATCACATTCCAGCTGACTTACAAT CTTTAGATATCGGTCCTAAAACAGTCGAATTATTCGGCAAAGAACTTGAAGGTGCTAAAACTGTTGTATGGAACGGACCG ATGGGTGTGTTCGAAATGAGTAACTTTGCGAAAGGTACTGTAGGAGTATGTAAAGCAATTGCTGAACTGAAAGGTGCTAC TACAATTATTGGTGGTGGAGATTCAGCAGCAGCAGCAATGGACCTTGGATTCGCTGATAAGTTTACACATATCTCAACAG GCGGTGGCGCTTCGTTAGAGTACTTAGAAGGTAAAGAACTACCAGGTATTAAATCAATTTCTGACAAATAA
Upstream 100 bases:
>100_bases ATTCACGCGTAAGCGGGGGAAGATTTCGCTTCTCCTGCTTTTTTTAATAAGTTATTTGGTATAATTATATTGTAAGAATA TATTATTAGGAGGCCATAAC
Downstream 100 bases:
>100_bases AAAGGAGTTTTATAAATGAGAAAACCAATTATCGCAGGAAACTGGAAAATGAACAAAACGGTAAAAGAAGCGAAAGCATT TGTTTCAAGCTTACCAGAGT
Product: phosphoglycerate kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 396; Mature: 396
Protein sequence:
>396_residues MVKKVVSDLELKDKKVLVRADFNVPMKDGNITNDNRIVEALPTIKYIIEQGGKVILFSHLGKVKTEEDKANLSLQPVANR LSELLDKEVQFVAETRGEKLESAINALQPGDVLLFENTRFEDVDGKKESKNDAELGKYWASLGDVFVNDAFGTAHREHAS NVGVATHLDTAAGFLMEKEIKFIGGVVENPERPFVAILGGAKVSDKIGVIENLLEVADKVLIGGGMAYTFLKAQGKEIGH SLLEEDKIDLAKDLMERGKDKLVLPIDAKVTKEFSNDGEIEAVAIDHIPADLQSLDIGPKTVELFGKELEGAKTVVWNGP MGVFEMSNFAKGTVGVCKAIAELKGATTIIGGGDSAAAAMDLGFADKFTHISTGGGASLEYLEGKELPGIKSISDK
Sequences:
>Translated_396_residues MVKKVVSDLELKDKKVLVRADFNVPMKDGNITNDNRIVEALPTIKYIIEQGGKVILFSHLGKVKTEEDKANLSLQPVANR LSELLDKEVQFVAETRGEKLESAINALQPGDVLLFENTRFEDVDGKKESKNDAELGKYWASLGDVFVNDAFGTAHREHAS NVGVATHLDTAAGFLMEKEIKFIGGVVENPERPFVAILGGAKVSDKIGVIENLLEVADKVLIGGGMAYTFLKAQGKEIGH SLLEEDKIDLAKDLMERGKDKLVLPIDAKVTKEFSNDGEIEAVAIDHIPADLQSLDIGPKTVELFGKELEGAKTVVWNGP MGVFEMSNFAKGTVGVCKAIAELKGATTIIGGGDSAAAAMDLGFADKFTHISTGGGASLEYLEGKELPGIKSISDK >Mature_396_residues MVKKVVSDLELKDKKVLVRADFNVPMKDGNITNDNRIVEALPTIKYIIEQGGKVILFSHLGKVKTEEDKANLSLQPVANR LSELLDKEVQFVAETRGEKLESAINALQPGDVLLFENTRFEDVDGKKESKNDAELGKYWASLGDVFVNDAFGTAHREHAS NVGVATHLDTAAGFLMEKEIKFIGGVVENPERPFVAILGGAKVSDKIGVIENLLEVADKVLIGGGMAYTFLKAQGKEIGH SLLEEDKIDLAKDLMERGKDKLVLPIDAKVTKEFSNDGEIEAVAIDHIPADLQSLDIGPKTVELFGKELEGAKTVVWNGP MGVFEMSNFAKGTVGVCKAIAELKGATTIIGGGDSAAAAMDLGFADKFTHISTGGGASLEYLEGKELPGIKSISDK
Specific function: Second phase of glycolysis; second step. [C]
COG id: COG0126
COG function: function code G; 3-phosphoglycerate kinase
Gene ontology:
Cell location: Cytoplasm (Potential)
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phosphoglycerate kinase family
Homologues:
Organism=Homo sapiens, GI4505763, Length=412, Percent_Identity=43.9320388349515, Blast_Score=320, Evalue=2e-87, Organism=Homo sapiens, GI31543397, Length=415, Percent_Identity=43.3734939759036, Blast_Score=313, Evalue=2e-85, Organism=Escherichia coli, GI1789294, Length=392, Percent_Identity=43.1122448979592, Blast_Score=298, Evalue=3e-82, Organism=Caenorhabditis elegans, GI17508823, Length=412, Percent_Identity=45.873786407767, Blast_Score=336, Evalue=2e-92, Organism=Saccharomyces cerevisiae, GI6319857, Length=409, Percent_Identity=47.921760391198, Blast_Score=346, Evalue=4e-96, Organism=Drosophila melanogaster, GI24581203, Length=415, Percent_Identity=44.0963855421687, Blast_Score=315, Evalue=3e-86, Organism=Drosophila melanogaster, GI17136394, Length=408, Percent_Identity=43.1372549019608, Blast_Score=300, Evalue=1e-81,
Paralogues:
None
Copy number: 2990 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 1460 Molecules/Cell In: Stationary-Phase, Rich-Media (Based on E. coli). [C]
Swissprot (AC and ID): PGK_MACCJ (B9EAG8)
Other databases:
- EMBL: AP009484 - RefSeq: YP_002559925.1 - GeneID: 7390585 - GenomeReviews: AP009484_GR - KEGG: mcl:MCCL_0522 - OMA: DCIGDEV - GO: GO:0005737 - GO: GO:0006096 - HAMAP: MF_00145 - InterPro: IPR001576 - InterPro: IPR015901 - InterPro: IPR015911 - InterPro: IPR015824 - Gene3D: G3DSA:3.40.50.1270 - Gene3D: G3DSA:3.40.50.1260 - PANTHER: PTHR11406 - PIRSF: PIRSF000724 - PRINTS: PR00477
Pfam domain/function: PF00162 PGK; SSF53748 PGK
EC number: =2.7.2.3
Molecular weight: Translated: 42593; Mature: 42593
Theoretical pI: Translated: 4.76; Mature: 4.76
Prosite motif: PS00111 PGLYCERATE_KINASE
Important sites: BINDING 36-36 BINDING 119-119 BINDING 156-156 BINDING 206-206 BINDING 325-325
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVKKVVSDLELKDKKVLVRADFNVPMKDGNITNDNRIVEALPTIKYIIEQGGKVILFSHL CCHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECC GKVKTEEDKANLSLQPVANRLSELLDKEVQFVAETRGEKLESAINALQPGDVLLFENTRF CCCCCCCHHCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCC EDVDGKKESKNDAELGKYWASLGDVFVNDAFGTAHREHASNVGVATHLDTAAGFLMEKEI CCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCEEEEHHHHHHHHHHHHH KFIGGVVENPERPFVAILGGAKVSDKIGVIENLLEVADKVLIGGGMAYTFLKAQGKEIGH HHHCHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHEECCCHHEEHHHHCCHHHHH SLLEEDKIDLAKDLMERGKDKLVLPIDAKVTKEFSNDGEIEAVAIDHIPADLQSLDIGPK HHHHHHHHHHHHHHHHCCCCCEEEEECHHHHHHCCCCCCEEEEEECCCCCCHHHCCCCCH TVELFGKELEGAKTVVWNGPMGVFEMSNFAKGTVGVCKAIAELKGATTIIGGGDSAAAAM HHHHHHHHCCCCEEEEECCCCCHHHHCCCCCCHHHHHHHHHHHCCCEEEEECCCCHHHHH DLGFADKFTHISTGGGASLEYLEGKELPGIKSISDK HCCCCCCCCEEECCCCCCEEECCCCCCCCCCCCCCC >Mature Secondary Structure MVKKVVSDLELKDKKVLVRADFNVPMKDGNITNDNRIVEALPTIKYIIEQGGKVILFSHL CCHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECC GKVKTEEDKANLSLQPVANRLSELLDKEVQFVAETRGEKLESAINALQPGDVLLFENTRF CCCCCCCHHCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCC EDVDGKKESKNDAELGKYWASLGDVFVNDAFGTAHREHASNVGVATHLDTAAGFLMEKEI CCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCEEEEHHHHHHHHHHHHH KFIGGVVENPERPFVAILGGAKVSDKIGVIENLLEVADKVLIGGGMAYTFLKAQGKEIGH HHHCHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHEECCCHHEEHHHHCCHHHHH SLLEEDKIDLAKDLMERGKDKLVLPIDAKVTKEFSNDGEIEAVAIDHIPADLQSLDIGPK HHHHHHHHHHHHHHHHCCCCCEEEEECHHHHHHCCCCCCEEEEEECCCCCCHHHCCCCCH TVELFGKELEGAKTVVWNGPMGVFEMSNFAKGTVGVCKAIAELKGATTIIGGGDSAAAAM HHHHHHHHCCCCEEEEECCCCCHHHHCCCCCCHHHHHHHHHHHCCCEEEEECCCCHHHHH DLGFADKFTHISTGGGASLEYLEGKELPGIKSISDK HCCCCCCCCEEECCCCCCEEECCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA