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The map label for this gene is yciC [H]

Identifier: 222150701

GI number: 222150701

Start: 477041

End: 477952

Strand: Direct

Name: yciC [H]

Synonym: MCCL_0451

Alternate gene names: 222150701

Gene position: 477041-477952 (Clockwise)

Preceding gene: 222150699

Following gene: 222150702

Centisome position: 22.69

GC content: 35.96

Gene sequence:

>912_bases
ATGTCTCAGAAGATGAAAATTATTATTCTTAGTGGATTTCTAGGGAGTGGCAAGACAACTTTATTACTCAATATATTAAA
ACATAATAATGAAAAAAACAATTTCAATATCGCAATATTAATGAACGAACTTGGTGGTTTTAATGTTGACTCTAAAATCA
TCGGAGAAGAAACACCGTATAATGAATTATTGAACGGATGTATCTGCTGCGATTTAAAACAGGATGTAGCAGTGCAAATC
AGTGATCTCTATCATCGACATCATCCGGACTATGTCATTATCGAGGCAACTGGTGTAGCACATCCTGTAGAAATTTATGA
TGCTTGTACAGATCCAGTGCTGACACCTATCTCCGATGTTTATAATATCACTACGATAGTAGATGCTAAGCGTTTTCTCG
AACGATTCAAATATACTGAATCTACGAGAAGACTGATGGAAGAACAGGTAAAGTATGCAGATATTGTGATTGTAAATAAG
ATAGATACAATAGAGAACGCTGAGCGCATAGAATTATCGCATCAGCTGCTGCAAATTAATGTGCGAGCACAAATCATAGA
AACGTCCTACAGTGAGATTGAGTTTAACCTTTTAGAGCAAAAAGGAAACGAGCAGCACGGTGATATACATATGCATCATG
GGATATCGTCTGTTGTGTATACGTTTAATGGACCGATTGATTCACGTGCGTTCGTAAAATGGTTAACACAGTTACCCGAT
AGTGTTTTAAGGGTGAAAGGATTTATTAAGTTCAGAGAGAATAAAGACCAGACCGTATTGTTTCAGTACGCCTATGGTAT
TCCTCAGTATGAAGAAGAACTAATGAATTTACCACTTAAACTGGTGGTTATTGGTGAAGGATTAGATAAGCATAAAATTA
TGGATCAATTGGATCAGCTGCAATTTAGTTAA

Upstream 100 bases:

>100_bases
TGCTATTTACAATCTTTAGGTATGAATATCGTTAAGTCTTACTGACGTTTACTGTTTAATGAAAAATATATACAATACTC
TAAAAAGGAAGGTTAAATTT

Downstream 100 bases:

>100_bases
GAAATGTGAAGGTTTTATCACATTTCTTATTTTTTCTCTTTTTTTGATTGTAAATGAATGAATTTGGTTGACATTGAATG
CAAACAATCATATTATGAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 303; Mature: 302

Protein sequence:

>303_residues
MSQKMKIIILSGFLGSGKTTLLLNILKHNNEKNNFNIAILMNELGGFNVDSKIIGEETPYNELLNGCICCDLKQDVAVQI
SDLYHRHHPDYVIIEATGVAHPVEIYDACTDPVLTPISDVYNITTIVDAKRFLERFKYTESTRRLMEEQVKYADIVIVNK
IDTIENAERIELSHQLLQINVRAQIIETSYSEIEFNLLEQKGNEQHGDIHMHHGISSVVYTFNGPIDSRAFVKWLTQLPD
SVLRVKGFIKFRENKDQTVLFQYAYGIPQYEEELMNLPLKLVVIGEGLDKHKIMDQLDQLQFS

Sequences:

>Translated_303_residues
MSQKMKIIILSGFLGSGKTTLLLNILKHNNEKNNFNIAILMNELGGFNVDSKIIGEETPYNELLNGCICCDLKQDVAVQI
SDLYHRHHPDYVIIEATGVAHPVEIYDACTDPVLTPISDVYNITTIVDAKRFLERFKYTESTRRLMEEQVKYADIVIVNK
IDTIENAERIELSHQLLQINVRAQIIETSYSEIEFNLLEQKGNEQHGDIHMHHGISSVVYTFNGPIDSRAFVKWLTQLPD
SVLRVKGFIKFRENKDQTVLFQYAYGIPQYEEELMNLPLKLVVIGEGLDKHKIMDQLDQLQFS
>Mature_302_residues
SQKMKIIILSGFLGSGKTTLLLNILKHNNEKNNFNIAILMNELGGFNVDSKIIGEETPYNELLNGCICCDLKQDVAVQIS
DLYHRHHPDYVIIEATGVAHPVEIYDACTDPVLTPISDVYNITTIVDAKRFLERFKYTESTRRLMEEQVKYADIVIVNKI
DTIENAERIELSHQLLQINVRAQIIETSYSEIEFNLLEQKGNEQHGDIHMHHGISSVVYTFNGPIDSRAFVKWLTQLPDS
VLRVKGFIKFRENKDQTVLFQYAYGIPQYEEELMNLPLKLVVIGEGLDKHKIMDQLDQLQFS

Specific function: May bind GTP. Might act as metal chaperone (Potential). Contributes to optimal growth under starvation for zinc [H]

COG id: COG0523

COG function: function code R; Putative GTPases (G3E family)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 cobW C-terminal domain [H]

Homologues:

Organism=Homo sapiens, GI223941779, Length=334, Percent_Identity=29.3413173652695, Blast_Score=98, Evalue=9e-21,
Organism=Homo sapiens, GI33469141, Length=347, Percent_Identity=28.5302593659942, Blast_Score=94, Evalue=2e-19,
Organism=Homo sapiens, GI146231952, Length=347, Percent_Identity=29.1066282420749, Blast_Score=94, Evalue=2e-19,
Organism=Homo sapiens, GI126722884, Length=347, Percent_Identity=28.5302593659942, Blast_Score=93, Evalue=3e-19,
Organism=Homo sapiens, GI148727351, Length=347, Percent_Identity=28.8184438040346, Blast_Score=91, Evalue=1e-18,
Organism=Homo sapiens, GI223941776, Length=333, Percent_Identity=28.5285285285285, Blast_Score=81, Evalue=1e-15,
Organism=Homo sapiens, GI119120938, Length=327, Percent_Identity=28.4403669724771, Blast_Score=74, Evalue=2e-13,
Organism=Escherichia coli, GI1788499, Length=192, Percent_Identity=29.6875, Blast_Score=100, Evalue=1e-22,
Organism=Escherichia coli, GI87082430, Length=282, Percent_Identity=30.4964539007092, Blast_Score=97, Evalue=9e-22,
Organism=Saccharomyces cerevisiae, GI6324356, Length=222, Percent_Identity=29.7297297297297, Blast_Score=75, Evalue=1e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003495
- InterPro:   IPR011629 [H]

Pfam domain/function: PF02492 cobW; PF07683 CobW_C [H]

EC number: NA

Molecular weight: Translated: 34756; Mature: 34625

Theoretical pI: Translated: 5.22; Mature: 5.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQKMKIIILSGFLGSGKTTLLLNILKHNNEKNNFNIAILMNELGGFNVDSKIIGEETPY
CCCCEEEEEEECCCCCCCHHEEHHHHHCCCCCCCEEEEEEEECCCCCCCCCEECCCCCCH
NELLNGCICCDLKQDVAVQISDLYHRHHPDYVIIEATGVAHPVEIYDACTDPVLTPISDV
HHHHCCEEEEECCCCHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHCCCCCCCCCHHHH
YNITTIVDAKRFLERFKYTESTRRLMEEQVKYADIVIVNKIDTIENAERIELSHQLLQIN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCCCCHHHHHHHHHHEEEE
VRAQIIETSYSEIEFNLLEQKGNEQHGDIHMHHGISSVVYTFNGPIDSRAFVKWLTQLPD
EEEEEEECCHHHHHEEEHHHCCCCCCCCEEEECCCCEEEEEECCCCCHHHHHHHHHHCCH
SVLRVKGFIKFRENKDQTVLFQYAYGIPQYEEELMNLPLKLVVIGEGLDKHKIMDQLDQL
HHHHHHHHEEEECCCCCEEEEEEECCCCHHHHHHHCCCEEEEEEECCCCHHHHHHHHHHH
QFS
CCC
>Mature Secondary Structure 
SQKMKIIILSGFLGSGKTTLLLNILKHNNEKNNFNIAILMNELGGFNVDSKIIGEETPY
CCCEEEEEEECCCCCCCHHEEHHHHHCCCCCCCEEEEEEEECCCCCCCCCEECCCCCCH
NELLNGCICCDLKQDVAVQISDLYHRHHPDYVIIEATGVAHPVEIYDACTDPVLTPISDV
HHHHCCEEEEECCCCHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHCCCCCCCCCHHHH
YNITTIVDAKRFLERFKYTESTRRLMEEQVKYADIVIVNKIDTIENAERIELSHQLLQIN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCCCCHHHHHHHHHHEEEE
VRAQIIETSYSEIEFNLLEQKGNEQHGDIHMHHGISSVVYTFNGPIDSRAFVKWLTQLPD
EEEEEEECCHHHHHEEEHHHCCCCCCCCEEEECCCCEEEEEECCCCCHHHHHHHHHHCCH
SVLRVKGFIKFRENKDQTVLFQYAYGIPQYEEELMNLPLKLVVIGEGLDKHKIMDQLDQL
HHHHHHHHEEEECCCCCEEEEEEECCCCHHHHHHHCCCEEEEEEECCCCHHHHHHHHHHH
QFS
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969502; 9384377; 9811636 [H]