Click here to switch to the map view.

The map label for this gene is fruR [H]

Identifier: 222150702

GI number: 222150702

Start: 478075

End: 478812

Strand: Direct

Name: fruR [H]

Synonym: MCCL_0452

Alternate gene names: 222150702

Gene position: 478075-478812 (Clockwise)

Preceding gene: 222150701

Following gene: 222150703

Centisome position: 22.74

GC content: 38.62

Gene sequence:

>738_bases
ATGCTAACAATTGAAAGACATAATACAATATTAAGGCTTTTAGAAATACATGAAATTATTACGCTGCAAATGCTTATCGA
TGAGACGCATTGCAGTGAGTCTACAATAAGAAGAGATCTTTCTACATTAGAAGATGAAGGTCAGTTGATTCGCATTCATG
GGGGCGCGAAAAAGGTGACCGAAAAACATAGAGATATCGCACTCTCTGTGAAGTCTACGAAAAAAACGAAGGAAAAAGAA
GAAATCGCCAAGGTAGCTGCGGCACAAGTGAGGAATAATGACTGTATCTATCTGGATGCAGGGAGTAGCACATTAATGAT
GATTCCTTATTTGGATCAAGCGCATATCACCATTGTAACGAATGGTTTGACACATGTACCCCCGCTTGTGGAAAAGGGCT
ATGAAGTCTATATGATTGGTGGTTATATCAAATCGGATACACATGCAAGCATTGGTGTACAGGCAATAGAAAATTTGAAG
CAGTTTCGCTTTGATAAAGCATTCATGGGTGCAAACGGCGTACATCTAACACAAGGCATCACAACTCCGGATATCGAAGA
AGCCTATGTAAAGCGAAAGGCAATTGAAAAAGCTGAACAAGTCTACTTTTTAGTTGATGACAGCAAGTTTGATGAAGTGA
CATTTGCGAAAGTATTAGACATGCAAGAAGGTAGAACGATGCTGATTACGAATCGTGAGAATAACCTTCAGCATCGATAT
AGTAAATATTTAATATAG

Upstream 100 bases:

>100_bases
TTTCTTATTTTTTCTCTTTTTTTGATTGTAAATGAATGAATTTGGTTGACATTGAATGCAAACAATCATATTATGAAAGT
GTTCACAAAGGAGGTCTCCT

Downstream 100 bases:

>100_bases
GAGGCAGTTTATGATTTATACAATAACATTAAATCCATCTATCGATTATGTGATGTTTACGGATAGATTTGAAACTGGAG
TATTGAATCGCGCACAGACG

Product: transcriptional regulator DeoR family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 245; Mature: 245

Protein sequence:

>245_residues
MLTIERHNTILRLLEIHEIITLQMLIDETHCSESTIRRDLSTLEDEGQLIRIHGGAKKVTEKHRDIALSVKSTKKTKEKE
EIAKVAAAQVRNNDCIYLDAGSSTLMMIPYLDQAHITIVTNGLTHVPPLVEKGYEVYMIGGYIKSDTHASIGVQAIENLK
QFRFDKAFMGANGVHLTQGITTPDIEEAYVKRKAIEKAEQVYFLVDDSKFDEVTFAKVLDMQEGRTMLITNRENNLQHRY
SKYLI

Sequences:

>Translated_245_residues
MLTIERHNTILRLLEIHEIITLQMLIDETHCSESTIRRDLSTLEDEGQLIRIHGGAKKVTEKHRDIALSVKSTKKTKEKE
EIAKVAAAQVRNNDCIYLDAGSSTLMMIPYLDQAHITIVTNGLTHVPPLVEKGYEVYMIGGYIKSDTHASIGVQAIENLK
QFRFDKAFMGANGVHLTQGITTPDIEEAYVKRKAIEKAEQVYFLVDDSKFDEVTFAKVLDMQEGRTMLITNRENNLQHRY
SKYLI
>Mature_245_residues
MLTIERHNTILRLLEIHEIITLQMLIDETHCSESTIRRDLSTLEDEGQLIRIHGGAKKVTEKHRDIALSVKSTKKTKEKE
EIAKVAAAQVRNNDCIYLDAGSSTLMMIPYLDQAHITIVTNGLTHVPPLVEKGYEVYMIGGYIKSDTHASIGVQAIENLK
QFRFDKAFMGANGVHLTQGITTPDIEEAYVKRKAIEKAEQVYFLVDDSKFDEVTFAKVLDMQEGRTMLITNRENNLQHRY
SKYLI

Specific function: Probable Repressor For The Aga Operon For N-Acetyl Galactosamine Transport And Metabolism. [C]

COG id: COG1349

COG function: function code KG; Transcriptional regulators of sugar metabolism

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH deoR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI226510968, Length=225, Percent_Identity=28.8888888888889, Blast_Score=102, Evalue=3e-23,
Organism=Escherichia coli, GI1789519, Length=225, Percent_Identity=30.6666666666667, Blast_Score=101, Evalue=4e-23,
Organism=Escherichia coli, GI1789059, Length=210, Percent_Identity=34.2857142857143, Blast_Score=100, Evalue=7e-23,
Organism=Escherichia coli, GI1789829, Length=212, Percent_Identity=29.2452830188679, Blast_Score=99, Evalue=3e-22,
Organism=Escherichia coli, GI1790753, Length=213, Percent_Identity=28.6384976525822, Blast_Score=88, Evalue=4e-19,
Organism=Escherichia coli, GI1788069, Length=197, Percent_Identity=29.9492385786802, Blast_Score=84, Evalue=9e-18,
Organism=Escherichia coli, GI1787540, Length=210, Percent_Identity=30, Blast_Score=78, Evalue=4e-16,
Organism=Escherichia coli, GI1787063, Length=194, Percent_Identity=29.3814432989691, Blast_Score=73, Evalue=2e-14,
Organism=Escherichia coli, GI1790635, Length=241, Percent_Identity=24.0663900414938, Blast_Score=71, Evalue=6e-14,
Organism=Escherichia coli, GI1789170, Length=224, Percent_Identity=25.8928571428571, Blast_Score=70, Evalue=9e-14,
Organism=Escherichia coli, GI87082344, Length=207, Percent_Identity=24.6376811594203, Blast_Score=69, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014036
- InterPro:   IPR001034
- InterPro:   IPR018356
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00455 DeoR; PF08220 HTH_DeoR [H]

EC number: NA

Molecular weight: Translated: 27877; Mature: 27877

Theoretical pI: Translated: 6.68; Mature: 6.68

Prosite motif: PS00894 HTH_DEOR_1 ; PS51000 HTH_DEOR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLTIERHNTILRLLEIHEIITLQMLIDETHCSESTIRRDLSTLEDEGQLIRIHGGAKKVT
CEEEECHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCEEEEECCHHHHH
EKHRDIALSVKSTKKTKEKEEIAKVAAAQVRNNDCIYLDAGSSTLMMIPYLDQAHITIVT
HHHHCEEEEECCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCEEEEEEECCCCEEEEEE
NGLTHVPPLVEKGYEVYMIGGYIKSDTHASIGVQAIENLKQFRFDKAFMGANGVHLTQGI
CCCCCCCHHHHCCCEEEEEECEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEECCC
TTPDIEEAYVKRKAIEKAEQVYFLVDDSKFDEVTFAKVLDMQEGRTMLITNRENNLQHRY
CCCCHHHHHHHHHHHHHHHEEEEEECCCCCCHHHHHHHHHHCCCCEEEEECCCCCHHHHH
SKYLI
HHCCC
>Mature Secondary Structure
MLTIERHNTILRLLEIHEIITLQMLIDETHCSESTIRRDLSTLEDEGQLIRIHGGAKKVT
CEEEECHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCEEEEECCHHHHH
EKHRDIALSVKSTKKTKEKEEIAKVAAAQVRNNDCIYLDAGSSTLMMIPYLDQAHITIVT
HHHHCEEEEECCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCEEEEEEECCCCEEEEEE
NGLTHVPPLVEKGYEVYMIGGYIKSDTHASIGVQAIENLKQFRFDKAFMGANGVHLTQGI
CCCCCCCHHHHCCCEEEEEECEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEECCC
TTPDIEEAYVKRKAIEKAEQVYFLVDDSKFDEVTFAKVLDMQEGRTMLITNRENNLQHRY
CCCCHHHHHHHHHHHHHHHEEEEEECCCCCCHHHHHHHHHHCCCCEEEEECCCCCHHHHH
SKYLI
HHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]