| Definition | Macrococcus caseolyticus JCSC5402, complete genome. |
|---|---|
| Accession | NC_011999 |
| Length | 2,102,324 |
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The map label for this gene is 222150699
Identifier: 222150699
GI number: 222150699
Start: 475485
End: 476321
Strand: Direct
Name: 222150699
Synonym: MCCL_0449
Alternate gene names: NA
Gene position: 475485-476321 (Clockwise)
Preceding gene: 222150698
Following gene: 222150701
Centisome position: 22.62
GC content: 38.23
Gene sequence:
>837_bases TTGAAAGTCGCATGGATTACAGATACTGCATCAGGATGTAAGATTGGTGCTCATGAAGATCTATTTGTCGTACCGATGGG TGTGATATTAAATGATAAGCATTACCAAGATCAAGAAGAACTATCAGTGGAGGAATTCTATCGTCTACTGCAACAATATG GAGATGGTGCGAAAACGACGCAACCTAATTTTCAGGCATTGCATGAAATTTATGAACAAATCGAAAAGCTTGGTTATACG CATGTAATTGCGATTCATCCTTCAAGTGAGCTTACAGGTTCATACCAGAATTCATTGAGAGCCAGTCAGGATGCTTCTTT AATAAGCGCTGTAATTGATTCCAGGATTGGTAGCTATCCGATGAAGGCGATGATTGATAAGGGTATGGCTTTACTTGAGG ATGGGTATTCCTTTAATGAAGTCGTTGAAAAGTTAAAGGCTTATACAGAAGATACAGTACTATTCCTGCAACCAAAAAAT TTAAGTCAGATGAAAAAAAGCGGGCGTGTTTCTAAGACTCAGAGCTTTATGGCAGGATTATTAAATATTCAGCTGATTCT TCAGTTTGAAGAAGGGAAAATATATCCCGTAGAAAAAGTAAGAACTAAGAAGAAAGTCATAGAGGCAATGAAAAGGTGTA TTGAGGATAGACTTAGAACTGCACAACCAAAAGAAATATGTGTCGTTTACGCGGGCGATAGAAACGAAGCAGATATTTAT ATTGAATGGTTAAAAGAAAATTACCCAGACATTCATATTACCGACGAAATACTTGTCCCAGTTGCCGGAGTCCATCTAGG TTATGGTACCGTAGGGATAGGCTGGATTAATGCATAG
Upstream 100 bases:
>100_bases AATTAAAAATCGATTCTCTTGATGATACAAATAATAAATTATTATTTGTATCAAATATTGTGATAAAATAATAATAAACA ATAATCAGGAGGATAAACTA
Downstream 100 bases:
>100_bases ATAAAGAGGATTGGTGTAACCAATCCTCTTTATTATGTTCAAACGATAGATTAATCGTTCGACAGATTATTGATAAGTTT GTTCAAGAGTGTACTATAGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 278; Mature: 278
Protein sequence:
>278_residues MKVAWITDTASGCKIGAHEDLFVVPMGVILNDKHYQDQEELSVEEFYRLLQQYGDGAKTTQPNFQALHEIYEQIEKLGYT HVIAIHPSSELTGSYQNSLRASQDASLISAVIDSRIGSYPMKAMIDKGMALLEDGYSFNEVVEKLKAYTEDTVLFLQPKN LSQMKKSGRVSKTQSFMAGLLNIQLILQFEEGKIYPVEKVRTKKKVIEAMKRCIEDRLRTAQPKEICVVYAGDRNEADIY IEWLKENYPDIHITDEILVPVAGVHLGYGTVGIGWINA
Sequences:
>Translated_278_residues MKVAWITDTASGCKIGAHEDLFVVPMGVILNDKHYQDQEELSVEEFYRLLQQYGDGAKTTQPNFQALHEIYEQIEKLGYT HVIAIHPSSELTGSYQNSLRASQDASLISAVIDSRIGSYPMKAMIDKGMALLEDGYSFNEVVEKLKAYTEDTVLFLQPKN LSQMKKSGRVSKTQSFMAGLLNIQLILQFEEGKIYPVEKVRTKKKVIEAMKRCIEDRLRTAQPKEICVVYAGDRNEADIY IEWLKENYPDIHITDEILVPVAGVHLGYGTVGIGWINA >Mature_278_residues MKVAWITDTASGCKIGAHEDLFVVPMGVILNDKHYQDQEELSVEEFYRLLQQYGDGAKTTQPNFQALHEIYEQIEKLGYT HVIAIHPSSELTGSYQNSLRASQDASLISAVIDSRIGSYPMKAMIDKGMALLEDGYSFNEVVEKLKAYTEDTVLFLQPKN LSQMKKSGRVSKTQSFMAGLLNIQLILQFEEGKIYPVEKVRTKKKVIEAMKRCIEDRLRTAQPKEICVVYAGDRNEADIY IEWLKENYPDIHITDEILVPVAGVHLGYGTVGIGWINA
Specific function: Unknown
COG id: COG1307
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 DegV domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003797 [H]
Pfam domain/function: PF02645 DegV [H]
EC number: NA
Molecular weight: Translated: 31383; Mature: 31383
Theoretical pI: Translated: 5.41; Mature: 5.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKVAWITDTASGCKIGAHEDLFVVPMGVILNDKHYQDQEELSVEEFYRLLQQYGDGAKTT CEEEEEECCCCCCCCCCCCCEEEEEEEEEECCCCCCCHHHCCHHHHHHHHHHHCCCCCCC QPNFQALHEIYEQIEKLGYTHVIAIHPSSELTGSYQNSLRASQDASLISAVIDSRIGSYP CCCHHHHHHHHHHHHHCCCEEEEEECCCHHCCCHHHHHHHCHHHHHHHHHHHHHHCCCCC MKAMIDKGMALLEDGYSFNEVVEKLKAYTEDTVLFLQPKNLSQMKKSGRVSKTQSFMAGL HHHHHHCCHHHHHCCCCHHHHHHHHHHHCCCEEEEECCCCHHHHHHCCCCHHHHHHHHHH LNIQLILQFEEGKIYPVEKVRTKKKVIEAMKRCIEDRLRTAQPKEICVVYAGDRNEADIY HEEEEEEEECCCCEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCEE IEWLKENYPDIHITDEILVPVAGVHLGYGTVGIGWINA EEEHHCCCCCEEECHHHHHHHHHEEECCCCEEEEEECC >Mature Secondary Structure MKVAWITDTASGCKIGAHEDLFVVPMGVILNDKHYQDQEELSVEEFYRLLQQYGDGAKTT CEEEEEECCCCCCCCCCCCCEEEEEEEEEECCCCCCCHHHCCHHHHHHHHHHHCCCCCCC QPNFQALHEIYEQIEKLGYTHVIAIHPSSELTGSYQNSLRASQDASLISAVIDSRIGSYP CCCHHHHHHHHHHHHHCCCEEEEEECCCHHCCCHHHHHHHCHHHHHHHHHHHHHHCCCCC MKAMIDKGMALLEDGYSFNEVVEKLKAYTEDTVLFLQPKNLSQMKKSGRVSKTQSFMAGL HHHHHHCCHHHHHCCCCHHHHHHHHHHHCCCEEEEECCCCHHHHHHCCCCHHHHHHHHHH LNIQLILQFEEGKIYPVEKVRTKKKVIEAMKRCIEDRLRTAQPKEICVVYAGDRNEADIY HEEEEEEEECCCCEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCEE IEWLKENYPDIHITDEILVPVAGVHLGYGTVGIGWINA EEEHHCCCCCEEECHHHHHHHHHEEECCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11058132 [H]