Definition Macrococcus caseolyticus JCSC5402, complete genome.
Accession NC_011999
Length 2,102,324

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The map label for this gene is 222150699

Identifier: 222150699

GI number: 222150699

Start: 475485

End: 476321

Strand: Direct

Name: 222150699

Synonym: MCCL_0449

Alternate gene names: NA

Gene position: 475485-476321 (Clockwise)

Preceding gene: 222150698

Following gene: 222150701

Centisome position: 22.62

GC content: 38.23

Gene sequence:

>837_bases
TTGAAAGTCGCATGGATTACAGATACTGCATCAGGATGTAAGATTGGTGCTCATGAAGATCTATTTGTCGTACCGATGGG
TGTGATATTAAATGATAAGCATTACCAAGATCAAGAAGAACTATCAGTGGAGGAATTCTATCGTCTACTGCAACAATATG
GAGATGGTGCGAAAACGACGCAACCTAATTTTCAGGCATTGCATGAAATTTATGAACAAATCGAAAAGCTTGGTTATACG
CATGTAATTGCGATTCATCCTTCAAGTGAGCTTACAGGTTCATACCAGAATTCATTGAGAGCCAGTCAGGATGCTTCTTT
AATAAGCGCTGTAATTGATTCCAGGATTGGTAGCTATCCGATGAAGGCGATGATTGATAAGGGTATGGCTTTACTTGAGG
ATGGGTATTCCTTTAATGAAGTCGTTGAAAAGTTAAAGGCTTATACAGAAGATACAGTACTATTCCTGCAACCAAAAAAT
TTAAGTCAGATGAAAAAAAGCGGGCGTGTTTCTAAGACTCAGAGCTTTATGGCAGGATTATTAAATATTCAGCTGATTCT
TCAGTTTGAAGAAGGGAAAATATATCCCGTAGAAAAAGTAAGAACTAAGAAGAAAGTCATAGAGGCAATGAAAAGGTGTA
TTGAGGATAGACTTAGAACTGCACAACCAAAAGAAATATGTGTCGTTTACGCGGGCGATAGAAACGAAGCAGATATTTAT
ATTGAATGGTTAAAAGAAAATTACCCAGACATTCATATTACCGACGAAATACTTGTCCCAGTTGCCGGAGTCCATCTAGG
TTATGGTACCGTAGGGATAGGCTGGATTAATGCATAG

Upstream 100 bases:

>100_bases
AATTAAAAATCGATTCTCTTGATGATACAAATAATAAATTATTATTTGTATCAAATATTGTGATAAAATAATAATAAACA
ATAATCAGGAGGATAAACTA

Downstream 100 bases:

>100_bases
ATAAAGAGGATTGGTGTAACCAATCCTCTTTATTATGTTCAAACGATAGATTAATCGTTCGACAGATTATTGATAAGTTT
GTTCAAGAGTGTACTATAGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 278; Mature: 278

Protein sequence:

>278_residues
MKVAWITDTASGCKIGAHEDLFVVPMGVILNDKHYQDQEELSVEEFYRLLQQYGDGAKTTQPNFQALHEIYEQIEKLGYT
HVIAIHPSSELTGSYQNSLRASQDASLISAVIDSRIGSYPMKAMIDKGMALLEDGYSFNEVVEKLKAYTEDTVLFLQPKN
LSQMKKSGRVSKTQSFMAGLLNIQLILQFEEGKIYPVEKVRTKKKVIEAMKRCIEDRLRTAQPKEICVVYAGDRNEADIY
IEWLKENYPDIHITDEILVPVAGVHLGYGTVGIGWINA

Sequences:

>Translated_278_residues
MKVAWITDTASGCKIGAHEDLFVVPMGVILNDKHYQDQEELSVEEFYRLLQQYGDGAKTTQPNFQALHEIYEQIEKLGYT
HVIAIHPSSELTGSYQNSLRASQDASLISAVIDSRIGSYPMKAMIDKGMALLEDGYSFNEVVEKLKAYTEDTVLFLQPKN
LSQMKKSGRVSKTQSFMAGLLNIQLILQFEEGKIYPVEKVRTKKKVIEAMKRCIEDRLRTAQPKEICVVYAGDRNEADIY
IEWLKENYPDIHITDEILVPVAGVHLGYGTVGIGWINA
>Mature_278_residues
MKVAWITDTASGCKIGAHEDLFVVPMGVILNDKHYQDQEELSVEEFYRLLQQYGDGAKTTQPNFQALHEIYEQIEKLGYT
HVIAIHPSSELTGSYQNSLRASQDASLISAVIDSRIGSYPMKAMIDKGMALLEDGYSFNEVVEKLKAYTEDTVLFLQPKN
LSQMKKSGRVSKTQSFMAGLLNIQLILQFEEGKIYPVEKVRTKKKVIEAMKRCIEDRLRTAQPKEICVVYAGDRNEADIY
IEWLKENYPDIHITDEILVPVAGVHLGYGTVGIGWINA

Specific function: Unknown

COG id: COG1307

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 DegV domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003797 [H]

Pfam domain/function: PF02645 DegV [H]

EC number: NA

Molecular weight: Translated: 31383; Mature: 31383

Theoretical pI: Translated: 5.41; Mature: 5.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVAWITDTASGCKIGAHEDLFVVPMGVILNDKHYQDQEELSVEEFYRLLQQYGDGAKTT
CEEEEEECCCCCCCCCCCCCEEEEEEEEEECCCCCCCHHHCCHHHHHHHHHHHCCCCCCC
QPNFQALHEIYEQIEKLGYTHVIAIHPSSELTGSYQNSLRASQDASLISAVIDSRIGSYP
CCCHHHHHHHHHHHHHCCCEEEEEECCCHHCCCHHHHHHHCHHHHHHHHHHHHHHCCCCC
MKAMIDKGMALLEDGYSFNEVVEKLKAYTEDTVLFLQPKNLSQMKKSGRVSKTQSFMAGL
HHHHHHCCHHHHHCCCCHHHHHHHHHHHCCCEEEEECCCCHHHHHHCCCCHHHHHHHHHH
LNIQLILQFEEGKIYPVEKVRTKKKVIEAMKRCIEDRLRTAQPKEICVVYAGDRNEADIY
HEEEEEEEECCCCEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCEE
IEWLKENYPDIHITDEILVPVAGVHLGYGTVGIGWINA
EEEHHCCCCCEEECHHHHHHHHHEEECCCCEEEEEECC
>Mature Secondary Structure
MKVAWITDTASGCKIGAHEDLFVVPMGVILNDKHYQDQEELSVEEFYRLLQQYGDGAKTT
CEEEEEECCCCCCCCCCCCCEEEEEEEEEECCCCCCCHHHCCHHHHHHHHHHHCCCCCCC
QPNFQALHEIYEQIEKLGYTHVIAIHPSSELTGSYQNSLRASQDASLISAVIDSRIGSYP
CCCHHHHHHHHHHHHHCCCEEEEEECCCHHCCCHHHHHHHCHHHHHHHHHHHHHHCCCCC
MKAMIDKGMALLEDGYSFNEVVEKLKAYTEDTVLFLQPKNLSQMKKSGRVSKTQSFMAGL
HHHHHHCCHHHHHCCCCHHHHHHHHHHHCCCEEEEECCCCHHHHHHCCCCHHHHHHHHHH
LNIQLILQFEEGKIYPVEKVRTKKKVIEAMKRCIEDRLRTAQPKEICVVYAGDRNEADIY
HEEEEEEEECCCCEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCEE
IEWLKENYPDIHITDEILVPVAGVHLGYGTVGIGWINA
EEEHHCCCCCEEECHHHHHHHHHEEECCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11058132 [H]