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The map label for this gene is ytrA [H]

Identifier: 222150663

GI number: 222150663

Start: 439543

End: 439929

Strand: Direct

Name: ytrA [H]

Synonym: MCCL_0413

Alternate gene names: 222150663

Gene position: 439543-439929 (Clockwise)

Preceding gene: 222150662

Following gene: 222150664

Centisome position: 20.91

GC content: 39.02

Gene sequence:

>387_bases
ATGATATCAATCGACAATAGGAGTCGTATTCCGATATATGAGCAGCTTATCAATGGATTTAAGCTTCAAATTATGAATGG
CGTTCTGCTACCGGATGAAAAGCTGCCGTCTGTGAGACAGCTTGCGCAAGAGTTAACCATTAATCCGAACACTATTCAAA
AGGCATACCGTGAACTAGAACATCTAGGTTACACCTATTCAGTCCCAGGTAAAGGAAGTTTTGTAAACAACATTCAAAAT
GAGATGAATAAGGAGCGCATCAACATGTTAACAGAGACTTTGCATAAAACAGTGCAGGAATTACTATTTCTAGGTCTGAC
GAAAGAAGAGATTATAGCAGCAATTGAAAACATGAGGGGTGAGCACGATGACAATCAGACTGAATAA

Upstream 100 bases:

>100_bases
AAATATCCTGATGCTATTTTTTTGTCAAAAGGTTGACGAATTCTGTATTGTGTGTATTATATTATATAGTACAGTTAATA
CAGTAGAACGGAGAGGTTTT

Downstream 100 bases:

>100_bases
GGTCAGCAAGTCATTTGGAAAGTTTAAAGCGGTGGACGAAGTTGACTTGATAATAAAGCAAGGTTCAATTCAAGGGTTAC
TTGGAAGTAATGGGGCAGGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 128; Mature: 128

Protein sequence:

>128_residues
MISIDNRSRIPIYEQLINGFKLQIMNGVLLPDEKLPSVRQLAQELTINPNTIQKAYRELEHLGYTYSVPGKGSFVNNIQN
EMNKERINMLTETLHKTVQELLFLGLTKEEIIAAIENMRGEHDDNQTE

Sequences:

>Translated_128_residues
MISIDNRSRIPIYEQLINGFKLQIMNGVLLPDEKLPSVRQLAQELTINPNTIQKAYRELEHLGYTYSVPGKGSFVNNIQN
EMNKERINMLTETLHKTVQELLFLGLTKEEIIAAIENMRGEHDDNQTE
>Mature_128_residues
MISIDNRSRIPIYEQLINGFKLQIMNGVLLPDEKLPSVRQLAQELTINPNTIQKAYRELEHLGYTYSVPGKGSFVNNIQN
EMNKERINMLTETLHKTVQELLFLGLTKEEIIAAIENMRGEHDDNQTE

Specific function: Negatively regulates ABC transporter complex ytrBCDEF that plays a role in acetoin utilization during stationary phase and sporulation [H]

COG id: COG1725

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH gntR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000524
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00392 GntR [H]

EC number: NA

Molecular weight: Translated: 14754; Mature: 14754

Theoretical pI: Translated: 4.96; Mature: 4.96

Prosite motif: PS50949 HTH_GNTR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MISIDNRSRIPIYEQLINGFKLQIMNGVLLPDEKLPSVRQLAQELTINPNTIQKAYRELE
CCCCCCCCCCCHHHHHHCHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHH
HLGYTYSVPGKGSFVNNIQNEMNKERINMLTETLHKTVQELLFLGLTKEEIIAAIENMRG
HCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCC
EHDDNQTE
CCCCCCCC
>Mature Secondary Structure
MISIDNRSRIPIYEQLINGFKLQIMNGVLLPDEKLPSVRQLAQELTINPNTIQKAYRELE
CCCCCCCCCCCHHHHHHCHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHH
HLGYTYSVPGKGSFVNNIQNEMNKERINMLTETLHKTVQELLFLGLTKEEIIAAIENMRG
HCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCC
EHDDNQTE
CCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9387221; 9384377 [H]